Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01716 and BL01070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence dna-align/BSNT_01716___ecsC.1.5803.seq
# -bsequence dna-align/BL01070___ecsC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01716___ecsC-BL01070___ecsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01716___ecsC-BL01070___ecsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01716___ecsC
# 2: BL01070___ecsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 734
# Identity: 494/734 (67.3%)
# Similarity: 494/734 (67.3%)
# Gaps: 46/734 ( 6.3%)
# Score: 1500.0
#
#
#=======================================
BSNT_01716___ 1 ATGACAGATAATCAGCTGCTGA----TGCAGGAAGCTTTGGA----ATGG 42
||||..||.||.||||| | ||.||||||| || .|||
BL01070___ecs 1 ATGAATGAAAACCAGCT----ATATTTGGAGGAAGC----GACCCGCTGG 42
BSNT_01716___ 43 AAAATGCATTTTTTGCGAAAGGATTCCATGTTTGAACGCTTTTCGAAGCG 92
||||||.|.|||.|..|||||...||.|||..|||.||..|.|||||..|
BL01070___ecs 43 AAAATGAAGTTTCTCAGAAAGCCGTCGATGGCTGAGCGGATGTCGAAAGG 92
BSNT_01716___ 93 TGTCCAGACGAAGGTGAATGAA----CGGATTCCTGAAAAAATCCATACG 138
.||.|||.|||| |||.|| ||.|||||.|..|||.|.||.|.|
BL01070___ecs 93 GGTACAGTCGAA----AATTAACGCCCGCATTCCCGCCAAAGTTCACAAG 138
BSNT_01716___ 139 GTCG-TCACCGAGAGTGTGAGAAAAATGGTAGAAGCGACAATGGCCGGCT 187
| || |.||.||.||..|.|.|||.|||||.||.||.||..||..|||||
BL01070___ecs 139 G-CGATAACAGAAAGCATTAAAAAGATGGTCGAGGCTACTTTGCTCGGCT 187
BSNT_01716___ 188 CCAATATCATCACTTATAAAAAGGATACAAGTGCACTGTCGCTCAGTGAA 237
|.|||.|.|..||||.|.|.|||.|.|||.|..|.||.|||||.||.|||
BL01070___ecs 188 CAAATTTAACGACTTTTGACAAGAAAACAGGCACGCTTTCGCTAAGGGAA 237
BSNT_01716___ 238 AAAAATGAATTGGCGAAAAAAACGATTGTTTCTTATCAGAAAGTGGCAGC 287
|||.||||..||||..|.||.||.||.|.|...|||||.||.|.|||.||
BL01070___ecs 238 AAAGATGAGCTGGCTCAGAAGACAATCGCTCAATATCAAAAGGCGGCTGC 287
BSNT_01716___ 288 TGCTG-AGGGAGTCGGCACCGGAGCGGGCGGCATTTTTTTAGGCATTGCT 336
||.|| ||||| ||||.||.||.||||||||.||||||.|.||..|.||.
BL01070___ecs 288 TGTTGAAGGGA-TCGGAACAGGCGCGGGCGGGATTTTTCTCGGACTGGCG 336
BSNT_01716___ 337 GATTTTCCGCTGCTGCTTTCAATTAAGATGAAGTGTTTATTTACCTTGTC 386
||.||||||||..||||....|||||.|||||.||..|.|||...|||.|
BL01070___ecs 337 GACTTTCCGCTCTTGCTCGGCATTAAAATGAAATGCCTGTTTGAATTGGC 386
BSNT_01716___ 387 TTCCATTTACGGCTTTGATGTGAAAGATGCACAAGAAAGGATGTTTTTGC 436
.||.||||||||.|..|||.|.||.||...|.|||||.||||||||.|.|
BL01070___ecs 387 GTCGATTTACGGATACGATATTAAGGAGAAAGAAGAACGGATGTTTCTTC 436
BSNT_01716___ 437 TGCTCGTGTTTCAGCTTGCGTTTTCGAGTGACGATGGCCGTAAATCGCTT 486
||....|.||||||||.||.|||||..|.||.|....|||.||| |...
BL01070___ecs 437 TGTATATTTTTCAGCTCGCCTTTTCCGGAGAAGCGCACCGAAAA--GAAA 484
BSNT_01716___ 487 TTTTCTG--TCATCGAAAATTGGGAGACGGAGAAAAAGTGC---ATCGAC 531
|||||.| |.||||||.|||||||.||.| |||||.|| |||||.
BL01070___ecs 485 TTTTCCGCATGATCGAACATTGGGATACCG---AAAAGCGCGAAATCGAT 531
BSNT_01716___ 532 TGG-AGAGTGTTCCAGCAGGAATATCGCGATTATATCGACGTAGTGAAGC 580
||| || |..||.||||||||.||.||.||.|||.||||..|.||.||||
BL01070___ecs 532 TGGCAG-GCTTTTCAGCAGGAGTACCGGGACTATCTCGATCTTGTAAAGC 580
BSNT_01716___ 581 TTTTTCAGCTTTTGCCGGGCGTGGGAGCGGCAGTCGGCGGAATTGCCAAT 630
|..||||||||.||||.|||.|.||.||||..||.|||||||..||.||.
BL01070___ecs 581 TGCTTCAGCTTGTGCCCGGCTTCGGCGCGGTCGTAGGCGGAACGGCTAAC 630
BSNT_01716___ 631 TATAAGCTGCTTGCTCAGCTTGGAGAAACGGCAAGACATGTTTTTCATCT 680
|||||||||||||..||.|||||.|||||.||.||.||.|||||.|||||
BL01070___ecs 631 TATAAGCTGCTTGGGCACCTTGGGGAAACAGCGAGGCACGTTTTCCATCT 680
BSNT_01716___ 681 GAGGATATTAA---AGGAAAAAGCCGGAGAATAA 711
||| |||.| |.||.|.|||||||.|.|.|
BL01070___ecs 681 GAG---ATTGATTCATGAGACAGCCGGATATTGA 711
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