Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00219 and BL01054

See Amino acid alignment / Visit BSNT_00219 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence dna-align/BSNT_00219___rpsJ.1.5803.seq
#    -bsequence dna-align/BL01054___rpsJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00219___rpsJ-BL01054___rpsJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00219___rpsJ-BL01054___rpsJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00219___rpsJ
# 2: BL01054___rpsJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     297/309 (96.1%)
# Similarity:   297/309 (96.1%)
# Gaps:           0/309 ( 0.0%)
# Score: 1437.0
# 
#
#=======================================

BSNT_00219___      1 ATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAAT     50
                     |||||||||||||||||||||||||||||.|||||.||||||||||||||
BL01054___rps      1 ATGGCAAAACAAAAAATTCGTATTCGTTTAAAAGCGTATGATCATAGAAT     50

BSNT_00219___     51 CCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTG    100
                     |||||||||||||||.||||||||||||||||||||.||||||||.||.|
BL01054___rps     51 CCTTGATCAATCTGCTGAGAAGATTGTTGAAACGGCTAAACGTTCCGGAG    100

BSNT_00219___    101 CCAGCGTATCTGGTCCGATTCCGTTGCCAACTGAAAAATCAGTTTACACA    150
                     |||||||.||||||||||||||||||||||||||.|||||||||||||||
BL01054___rps    101 CCAGCGTTTCTGGTCCGATTCCGTTGCCAACTGAGAAATCAGTTTACACA    150

BSNT_00219___    151 ATCCTTCGTGCGGTGCACAAATACAAAGATTCTCGTGAGCAATTTGAAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BL01054___rps    151 ATCCTTCGTGCGGTGCACAAATACAAAGATTCTCGTGAGCAATTCGAAAT    200

BSNT_00219___    201 GCGTACACATAAACGTTTAATCGACATTGTGAACCCAACACCACAAACTG    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BL01054___rps    201 GCGTACACATAAACGTTTGATCGACATTGTGAACCCAACACCACAAACTG    250

BSNT_00219___    251 TTGATGCTCTTATGCGATTAGACTTACCATCTGGTGTCGATATCGAAATT    300
                     ||||||||||.|||||||||||.|||||||||||||||||||||||||||
BL01054___rps    251 TTGATGCTCTAATGCGATTAGATTTACCATCTGGTGTCGATATCGAAATT    300

BSNT_00219___    301 AAACTTTAA    309
                     |||||||||
BL01054___rps    301 AAACTTTAA    309


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