Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00220 and BL01053
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence dna-align/BSNT_00220___rplC.1.5803.seq
# -bsequence dna-align/BL01053___rplC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00220___rplC-BL01053___rplC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00220___rplC-BL01053___rplC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00220___rplC
# 2: BL01053___rplC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity: 574/630 (91.1%)
# Similarity: 574/630 (91.1%)
# Gaps: 0/630 ( 0.0%)
# Score: 2646.0
#
#
#=======================================
BSNT_00220___ 1 ATGACCAAAGGAATCTTAGGAAGAAAAATTGGTATGACGCAAGTATTCGC 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
BL01053___rpl 1 ATGACCAAAGGAATCTTAGGAAGAAAAATTGGTATGACGCAAGTTTTCGC 50
BSNT_00220___ 51 TGAGAATGGTGATCTTATTCCGGTAACTGTTATCGAGGCTGCTCCAAACG 100
.||.||.|||||||||||||||||||||||||||||.||||||||.||||
BL01053___rpl 51 AGAAAACGGTGATCTTATTCCGGTAACTGTTATCGAAGCTGCTCCTAACG 100
BSNT_00220___ 101 TTGTTCTTCAAAAGAAAACAGCTGAAAACGACGGTTACGAAGCAATCCAG 150
||||.|||||.||||||||..|||||||||||||.||.|||||.||.|||
BL01053___rpl 101 TTGTGCTTCAGAAGAAAACTTCTGAAAACGACGGCTATGAAGCGATTCAG 150
BSNT_00220___ 151 CTTGGTTTTGACGACAAGCGTGAAAAGCTTTCTAACAAACCTGAAAAAGG 200
.|.|||||||||||||||||||||||||||.|.||||||||.||||||||
BL01053___rpl 151 ATCGGTTTTGACGACAAGCGTGAAAAGCTTGCCAACAAACCAGAAAAAGG 200
BSNT_00220___ 201 GCACGTTGCAAAAGCGGAAACTGCTCCTAAGCGCTTCGTTAAAGAATTAC 250
.|||||||||||||||||||||||||||||||||||||||||.|||||||
BL01053___rpl 201 ACACGTTGCAAAAGCGGAAACTGCTCCTAAGCGCTTCGTTAAGGAATTAC 250
BSNT_00220___ 251 GCGGAGTGGAAATGGATGCGTATGAAGTTGGTCAGGAAGTCAAGGTTGAA 300
||||||||||.||||||||||||||||||||||||||||||||.|||||.
BL01053___rpl 251 GCGGAGTGGATATGGATGCGTATGAAGTTGGTCAGGAAGTCAAAGTTGAT 300
BSNT_00220___ 301 ATTTTCTCTGCTGGAGAAATCGTAGATGTAACAGGAGTATCTAAAGGTAA 350
|||||||||...||||||||||||||||||||||||..|||.||||||||
BL01053___rpl 301 ATTTTCTCTAACGGAGAAATCGTAGATGTAACAGGAACATCGAAAGGTAA 350
BSNT_00220___ 351 AGGTTTCCAAGGTGCGATCAAGCGCCACGGACAATCTCGCGGACCTATGT 400
||||||||||||.||.|||||.|||||||||||||||||||||||.||||
BL01053___rpl 351 AGGTTTCCAAGGCGCTATCAAACGCCACGGACAATCTCGCGGACCAATGT 400
BSNT_00220___ 401 CTCACGGTTCACGCTACCACCGTCGTCCTGGTTCAATGGGACCTGTAGAT 450
||||||||||||||||||||||.||||||||||||||||||||.|||||.
BL01053___rpl 401 CTCACGGTTCACGCTACCACCGCCGTCCTGGTTCAATGGGACCGGTAGAC 450
BSNT_00220___ 451 CCTAACCGTGTATTCAAAGGTAAATTATTACCTGGACGTATGGGCGGAGA 500
||||||||||||||||||||.||..|.||.||||||||||||||||||||
BL01053___rpl 451 CCTAACCGTGTATTCAAAGGAAAGCTGTTGCCTGGACGTATGGGCGGAGA 500
BSNT_00220___ 501 GCAAATCACTGTTCAAAATCTTGAAATCGTTAAAGTTGATGCAGAACGCA 550
||||||||||||||||||.|||||||||||.|||||.||||||||.||||
BL01053___rpl 501 GCAAATCACTGTTCAAAACCTTGAAATCGTAAAAGTAGATGCAGAGCGCA 550
BSNT_00220___ 551 ATCTTCTTTTGATCAAAGGTAACGTACCTGGTGCGAAGAAATCTTTAATC 600
|.||||||||..|.|||||||||||.||||||||.||.|||||..||.||
BL01053___rpl 551 ACCTTCTTTTAGTTAAAGGTAACGTTCCTGGTGCCAAAAAATCACTAGTC 600
BSNT_00220___ 601 ACTGTTAAAAGTGCTGTTAAATCTAAATAA 630
||||||||||||||||||||||||||||||
BL01053___rpl 601 ACTGTTAAAAGTGCTGTTAAATCTAAATAA 630
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