Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00224 and BL01049

See Amino acid alignment / Visit BSNT_00224 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence dna-align/BSNT_00224___rplB.1.5803.seq
#    -bsequence dna-align/BL01049___rplB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00224___rplB-BL01049___rplB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00224___rplB-BL01049___rplB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00224___rplB
# 2: BL01049___rplB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 834
# Identity:     773/834 (92.7%)
# Similarity:   773/834 (92.7%)
# Gaps:           0/834 ( 0.0%)
# Score: 3621.0
# 
#
#=======================================

BSNT_00224___      1 ATGGCGATTAAAAAGTATAAACCGACCTCTAATGGACGTCGTGGCATGAC     50
                     |||||||||||||||||.||||||||||||||.||||||||.||||||||
BL01049___rpl      1 ATGGCGATTAAAAAGTACAAACCGACCTCTAACGGACGTCGCGGCATGAC     50

BSNT_00224___     51 AACTTCAGATTTTGCTGAAATCACGACTGACAAGCCGGAAAAATCCTTGC    100
                     ..||||.|||||.||.||||||||.||.||..||||||||||||||||||
BL01049___rpl     51 TTCTTCTGATTTCGCGGAAATCACTACAGATCAGCCGGAAAAATCCTTGC    100

BSNT_00224___    101 TTGCTCCCCTTCACAAAAAAGGCGGACGTAACAACCAAGGTAAATTGACT    150
                     ||||.||.||||||||||||||||||||.|||||||||||||||||.|||
BL01049___rpl    101 TTGCCCCGCTTCACAAAAAAGGCGGACGCAACAACCAAGGTAAATTAACT    150

BSNT_00224___    151 GTACGTCACCAAGGTGGCGGACATAAACGCCAATACCGTGTTATCGACTT    200
                     ||||||||.|||||.||||||||||||||||||||||||.||||||||||
BL01049___rpl    151 GTACGTCATCAAGGCGGCGGACATAAACGCCAATACCGTATTATCGACTT    200

BSNT_00224___    201 CAAACGCGATAAAGATGGTATACCTGGACGCGTTGCTACAGTTGAATACG    250
                     |||.|||||||||||||||||||||||||||||||||||||||||.||||
BL01049___rpl    201 CAAGCGCGATAAAGATGGTATACCTGGACGCGTTGCTACAGTTGAGTACG    250

BSNT_00224___    251 ATCCAAACCGTTCAGCTAACATCGCTCTAATCAACTATGCAGACGGAGAA    300
                     ||||||||||||||||||||||.||||||||.|||||||.||||||||||
BL01049___rpl    251 ATCCAAACCGTTCAGCTAACATTGCTCTAATTAACTATGTAGACGGAGAA    300

BSNT_00224___    301 AAACGTTACATTCTTGCTCCTAAAGGAATTCAAGTAGGTACTGAAATCAT    350
                     |||||.|||||.||.||||||||.||..||||||||||.|||||||||||
BL01049___rpl    301 AAACGCTACATCCTAGCTCCTAAGGGGCTTCAAGTAGGCACTGAAATCAT    350

BSNT_00224___    351 GTCAGGTCCTGAAGCTGACATTAAAGTAGGTAATGCACTTCCACTTATCA    400
                     |||||||||.|||||||||||||||||||||||.|||||||||||.||||
BL01049___rpl    351 GTCAGGTCCAGAAGCTGACATTAAAGTAGGTAACGCACTTCCACTGATCA    400

BSNT_00224___    401 ACATCCCTGTTGGTACAGTTGTGCATAACATTGAATTAAAACCTGGTAAA    450
                     |||||||||||||||||||||||||.||||||||||||||||||||.|||
BL01049___rpl    401 ACATCCCTGTTGGTACAGTTGTGCACAACATTGAATTAAAACCTGGAAAA    450

BSNT_00224___    451 GGCGGACAGCTTGTACGTTCAGCTGGTACATCTGCTCAGGTTCTTGGTAA    500
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BL01049___rpl    451 GGCGGACAGCTTGTACGTTCAGCTGGTACATCTGCTCAAGTTCTTGGTAA    500

BSNT_00224___    501 AGAAGGTAAATACGTTCTTGTACGTCTTAACTCTGGTGAAGTTCGCATGA    550
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BL01049___rpl    501 AGAAGGTAAATACGTTCTTGTACGTCTTAACTCCGGTGAAGTTCGCATGA    550

BSNT_00224___    551 TCCTTTCTGCTTGCCGTGCTTCTATCGGTCAAGTAGGTAACGAACAGCAC    600
                     |.||||||||||||||.||..|.|||||||||||.||||||||||||||.
BL01049___rpl    551 TTCTTTCTGCTTGCCGCGCAACAATCGGTCAAGTGGGTAACGAACAGCAT    600

BSNT_00224___    601 GAACTTATCAACATTGGTAAAGCTGGACGTTCTCGCTGGAAAGGCATCCG    650
                     |||||.||||||||.||||||||.|||||||||||||||||||||.|.||
BL01049___rpl    601 GAACTGATCAACATCGGTAAAGCCGGACGTTCTCGCTGGAAAGGCGTTCG    650

BSNT_00224___    651 TCCTACAGTTCGTGGTTCTGTAATGAACCCTAACGATCACCCACACGGTG    700
                     .|||||||||||.||||||||.||||||||||||||||||||.|||||||
BL01049___rpl    651 CCCTACAGTTCGCGGTTCTGTTATGAACCCTAACGATCACCCGCACGGTG    700

BSNT_00224___    701 GTGGTGAAGGACGTGCGCCAATCGGACGTAAATCACCAATGTCTCCATGG    750
                     |||||||||||||.||.||||||||||||||||||||.||||||||||||
BL01049___rpl    701 GTGGTGAAGGACGCGCTCCAATCGGACGTAAATCACCTATGTCTCCATGG    750

BSNT_00224___    751 GGCAAACCAACTCTTGGATTCAAGACTCGTAAGAAAAAGAACAAATCCGA    800
                     ||.||||||||||||||||||||.|||||||||||||||||||||||.||
BL01049___rpl    751 GGTAAACCAACTCTTGGATTCAAAACTCGTAAGAAAAAGAACAAATCAGA    800

BSNT_00224___    801 TAAATTTATCGTACGTCGTCGTAAAAATAAATAA    834
                     ||||||.|||||||||||||||||||||||||||
BL01049___rpl    801 TAAATTCATCGTACGTCGTCGTAAAAATAAATAA    834


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