Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00226 and BL01046

See Amino acid alignment / Visit BSNT_00226 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence dna-align/BSNT_00226___rpsC.1.5803.seq
#    -bsequence dna-align/BL01046___rpsC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00226___rpsC-BL01046___rpsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00226___rpsC-BL01046___rpsC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00226___rpsC
# 2: BL01046___rpsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity:     605/657 (92.1%)
# Similarity:   605/657 (92.1%)
# Gaps:           0/657 ( 0.0%)
# Score: 2817.0
# 
#
#=======================================

BSNT_00226___      1 GTGGGTCAAAAGGTAAATCCAGTCGGTCTTCGTATCGGAGTCATTCGTGA     50
                     |||||||||||||||||||||||||||||||||||.||.||.||.|||||
BL01046___rps      1 GTGGGTCAAAAGGTAAATCCAGTCGGTCTTCGTATTGGGGTTATACGTGA     50

BSNT_00226___     51 TTGGGAATCTAAGTGGTACGCTGGTAAAGATTACGCTGACTTCCTGCACG    100
                     ||||||||||||||||||||||||.||||||||||||||||||||.||||
BL01046___rps     51 TTGGGAATCTAAGTGGTACGCTGGCAAAGATTACGCTGACTTCCTTCACG    100

BSNT_00226___    101 AAGATTTAAAAATTCGTGAATACATTAGCAAACGCCTTTCTGACGCTTCT    150
                     |||||.|.|||||.|||||||..||||...|||||||.|||||||||||.
BL01046___rps    101 AAGATCTGAAAATCCGTGAATTTATTAATCAACGCCTGTCTGACGCTTCA    150

BSNT_00226___    151 GTTTCTAAAGTAGAAATCGAGCGTGCAGCAAACCGCGTTAACATTACGAT    200
                     ||||||||||||||||||||||||||.||||||||.||.||.||||||||
BL01046___rps    151 GTTTCTAAAGTAGAAATCGAGCGTGCGGCAAACCGTGTAAATATTACGAT    200

BSNT_00226___    201 CCACACAGCTAAGCCTGGTATGGTTATCGGTAAAGGCGGTTCTGAAGTCG    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BL01046___rps    201 CCACACAGCTAAGCCTGGTATGGTTATCGGTAAAGGCGGTTCCGAAGTCG    250

BSNT_00226___    251 AAGCACTTCGCAAAGCCCTTAACAGCCTTACTGGCAAGCGTGTACACATT    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BL01046___rps    251 AAGCGCTTCGCAAAGCCCTTAACAGCCTTACTGGCAAGCGTGTACACATT    300

BSNT_00226___    301 AACATTCTTGAAATCAAAAGAGCAGATCTTGATGCACAGCTAGTTGCTGA    350
                     |||||||||||||||||||||||.|||||||||||.||||||||||||||
BL01046___rps    301 AACATTCTTGAAATCAAAAGAGCTGATCTTGATGCTCAGCTAGTTGCTGA    350

BSNT_00226___    351 CAACATCGCTCGTCAATTAGAAAACCGTGTTTCTTTCCGCCGTGCGCAGA    400
                     .|||||.|||||||||||.|||||||||.|.||||||||.||||||||.|
BL01046___rps    351 TAACATTGCTCGTCAATTGGAAAACCGTATCTCTTTCCGTCGTGCGCAAA    400

BSNT_00226___    401 AACAACAAATCCAACGTACTATGCGTGCTGGAGCACAAGGTGTGAAAACA    450
                     |.||||||||||||||.||.|||||.|||||.||||||||..|.||||||
BL01046___rps    401 AGCAACAAATCCAACGCACAATGCGCGCTGGTGCACAAGGAATTAAAACA    450

BSNT_00226___    451 ATGGTTTCTGGTCGTCTTGGCGGTGCAGATATCGCTCGTTCTGAATACTA    500
                     ||||||||.||||||||||||||.||.||.||||||||||||||||||||
BL01046___rps    451 ATGGTTTCCGGTCGTCTTGGCGGCGCTGACATCGCTCGTTCTGAATACTA    500

BSNT_00226___    501 CAGTGAAGGAACTGTTCCATTGCACACATTACGTGCGGACATTGACTATG    550
                     ||||||||||||||||||||||||||||.|.|||||.|||||.|||||||
BL01046___rps    501 CAGTGAAGGAACTGTTCCATTGCACACACTTCGTGCAGACATCGACTATG    550

BSNT_00226___    551 CAACATCTGAAGCTGATACTACTTACGGTAAGCTTGGTGTAAAAGTCTGG    600
                     |.||||||||||||||.||.||||||||||||||||||||||||||||||
BL01046___rps    551 CTACATCTGAAGCTGACACAACTTACGGTAAGCTTGGTGTAAAAGTCTGG    600

BSNT_00226___    601 ATCTATCGTGGAGAGGTTCTTCCTACTAAGAAGAAAAAAGAGGAAGGAGG    650
                     |||||||||||||||||||||||||||||||||||||..|||||||||||
BL01046___rps    601 ATCTATCGTGGAGAGGTTCTTCCTACTAAGAAGAAAACTGAGGAAGGAGG    650

BSNT_00226___    651 AAAATAA    657
                     |||||||
BL01046___rps    651 AAAATAA    657


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