Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00226 and BL01046
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence dna-align/BSNT_00226___rpsC.1.5803.seq
# -bsequence dna-align/BL01046___rpsC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00226___rpsC-BL01046___rpsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00226___rpsC-BL01046___rpsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00226___rpsC
# 2: BL01046___rpsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity: 605/657 (92.1%)
# Similarity: 605/657 (92.1%)
# Gaps: 0/657 ( 0.0%)
# Score: 2817.0
#
#
#=======================================
BSNT_00226___ 1 GTGGGTCAAAAGGTAAATCCAGTCGGTCTTCGTATCGGAGTCATTCGTGA 50
|||||||||||||||||||||||||||||||||||.||.||.||.|||||
BL01046___rps 1 GTGGGTCAAAAGGTAAATCCAGTCGGTCTTCGTATTGGGGTTATACGTGA 50
BSNT_00226___ 51 TTGGGAATCTAAGTGGTACGCTGGTAAAGATTACGCTGACTTCCTGCACG 100
||||||||||||||||||||||||.||||||||||||||||||||.||||
BL01046___rps 51 TTGGGAATCTAAGTGGTACGCTGGCAAAGATTACGCTGACTTCCTTCACG 100
BSNT_00226___ 101 AAGATTTAAAAATTCGTGAATACATTAGCAAACGCCTTTCTGACGCTTCT 150
|||||.|.|||||.|||||||..||||...|||||||.|||||||||||.
BL01046___rps 101 AAGATCTGAAAATCCGTGAATTTATTAATCAACGCCTGTCTGACGCTTCA 150
BSNT_00226___ 151 GTTTCTAAAGTAGAAATCGAGCGTGCAGCAAACCGCGTTAACATTACGAT 200
||||||||||||||||||||||||||.||||||||.||.||.||||||||
BL01046___rps 151 GTTTCTAAAGTAGAAATCGAGCGTGCGGCAAACCGTGTAAATATTACGAT 200
BSNT_00226___ 201 CCACACAGCTAAGCCTGGTATGGTTATCGGTAAAGGCGGTTCTGAAGTCG 250
||||||||||||||||||||||||||||||||||||||||||.|||||||
BL01046___rps 201 CCACACAGCTAAGCCTGGTATGGTTATCGGTAAAGGCGGTTCCGAAGTCG 250
BSNT_00226___ 251 AAGCACTTCGCAAAGCCCTTAACAGCCTTACTGGCAAGCGTGTACACATT 300
||||.|||||||||||||||||||||||||||||||||||||||||||||
BL01046___rps 251 AAGCGCTTCGCAAAGCCCTTAACAGCCTTACTGGCAAGCGTGTACACATT 300
BSNT_00226___ 301 AACATTCTTGAAATCAAAAGAGCAGATCTTGATGCACAGCTAGTTGCTGA 350
|||||||||||||||||||||||.|||||||||||.||||||||||||||
BL01046___rps 301 AACATTCTTGAAATCAAAAGAGCTGATCTTGATGCTCAGCTAGTTGCTGA 350
BSNT_00226___ 351 CAACATCGCTCGTCAATTAGAAAACCGTGTTTCTTTCCGCCGTGCGCAGA 400
.|||||.|||||||||||.|||||||||.|.||||||||.||||||||.|
BL01046___rps 351 TAACATTGCTCGTCAATTGGAAAACCGTATCTCTTTCCGTCGTGCGCAAA 400
BSNT_00226___ 401 AACAACAAATCCAACGTACTATGCGTGCTGGAGCACAAGGTGTGAAAACA 450
|.||||||||||||||.||.|||||.|||||.||||||||..|.||||||
BL01046___rps 401 AGCAACAAATCCAACGCACAATGCGCGCTGGTGCACAAGGAATTAAAACA 450
BSNT_00226___ 451 ATGGTTTCTGGTCGTCTTGGCGGTGCAGATATCGCTCGTTCTGAATACTA 500
||||||||.||||||||||||||.||.||.||||||||||||||||||||
BL01046___rps 451 ATGGTTTCCGGTCGTCTTGGCGGCGCTGACATCGCTCGTTCTGAATACTA 500
BSNT_00226___ 501 CAGTGAAGGAACTGTTCCATTGCACACATTACGTGCGGACATTGACTATG 550
||||||||||||||||||||||||||||.|.|||||.|||||.|||||||
BL01046___rps 501 CAGTGAAGGAACTGTTCCATTGCACACACTTCGTGCAGACATCGACTATG 550
BSNT_00226___ 551 CAACATCTGAAGCTGATACTACTTACGGTAAGCTTGGTGTAAAAGTCTGG 600
|.||||||||||||||.||.||||||||||||||||||||||||||||||
BL01046___rps 551 CTACATCTGAAGCTGACACAACTTACGGTAAGCTTGGTGTAAAAGTCTGG 600
BSNT_00226___ 601 ATCTATCGTGGAGAGGTTCTTCCTACTAAGAAGAAAAAAGAGGAAGGAGG 650
|||||||||||||||||||||||||||||||||||||..|||||||||||
BL01046___rps 601 ATCTATCGTGGAGAGGTTCTTCCTACTAAGAAGAAAACTGAGGAAGGAGG 650
BSNT_00226___ 651 AAAATAA 657
|||||||
BL01046___rps 651 AAAATAA 657
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