Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00227 and BL01044

See Amino acid alignment / Visit BSNT_00227 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence dna-align/BSNT_00227___rplP.1.5803.seq
#    -bsequence dna-align/BL01044___rplP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00227___rplP-BL01044___rplP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00227___rplP-BL01044___rplP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00227___rplP
# 2: BL01044___rplP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity:     402/435 (92.4%)
# Similarity:   402/435 (92.4%)
# Gaps:           0/435 ( 0.0%)
# Score: 1878.0
# 
#
#=======================================

BSNT_00227___      1 ATGTTATTACCAAAACGCGTTAAATATCGCAGAGAGCATCGCGGAAAAAT     50
                     ||||||.|.|||||||||||||||||||||||||||||||||||||||||
BL01044___rpl      1 ATGTTAATGCCAAAACGCGTTAAATATCGCAGAGAGCATCGCGGAAAAAT     50

BSNT_00227___     51 GCGTGGCCGTGCGAAAGGCGGTACTGAAGTACATTTTGGAGAATTCGGTA    100
                     |||.|||||||||||||||||.||||||||.|||||.||.||||.|||||
BL01044___rpl     51 GCGCGGCCGTGCGAAAGGCGGCACTGAAGTGCATTTCGGTGAATACGGTA    100

BSNT_00227___    101 TCCAAGCTCTTGAAGCTTCTTGGATTACTAACCGTCAAATCGAAGCTGCA    150
                     |||||||||..|||.||||||||||.||.|||||.|||||||||||.|||
BL01044___rpl    101 TCCAAGCTCAAGAATCTTCTTGGATCACAAACCGCCAAATCGAAGCAGCA    150

BSNT_00227___    151 CGTATTGCGATGACTCGTTACATGAAACGTGGCGGTAAAGTTTGGATCAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01044___rpl    151 CGTATTGCGATGACTCGTTACATGAAACGTGGCGGTAAAGTTTGGATCAA    200

BSNT_00227___    201 AATTTTCCCTTCTAAACCTTACACTGCTAAACCACTTGAGGTACGTATGG    250
                     |||||||||||||||.|||||.||.|||||.||.||.|||||.||.||||
BL01044___rpl    201 AATTTTCCCTTCTAAGCCTTATACAGCTAAGCCTCTAGAGGTTCGGATGG    250

BSNT_00227___    251 GATCCGGTAAAGGGGCTCCAGAAGGTTGGGTAGCTGTTGTAAAACCGGGC    300
                     |.|||||||||||.|||||.|||||.||||||||||||||||||||||||
BL01044___rpl    251 GTTCCGGTAAAGGTGCTCCTGAAGGATGGGTAGCTGTTGTAAAACCGGGC    300

BSNT_00227___    301 AAAGTTTTATTTGAAATTTCTGGTGTGTCTGAAGAGGTTGCTCGTGAAGC    350
                     ||||||||||||||||||||||||||||||||.||.||.|||||.|||||
BL01044___rpl    301 AAAGTTTTATTTGAAATTTCTGGTGTGTCTGAGGAAGTCGCTCGCGAAGC    350

BSNT_00227___    351 GCTTCGCCTTGCATCTCACAAATTGCCAATTAAAACGAAGTTCGTAAAAC    400
                     .|||||.|||||||||||||||||||||||||||||||||||||||||||
BL01044___rpl    351 TCTTCGTCTTGCATCTCACAAATTGCCAATTAAAACGAAGTTCGTAAAAC    400

BSNT_00227___    401 GTGAAGAAATTGGTGGTGAATCAAATGAAAGCTAA    435
                     |||||||||||||||||||||||||||||||||||
BL01044___rpl    401 GTGAAGAAATTGGTGGTGAATCAAATGAAAGCTAA    435


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