Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00227 and BL01044
See
Amino acid alignment /
Visit
BSNT_00227 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence dna-align/BSNT_00227___rplP.1.5803.seq
# -bsequence dna-align/BL01044___rplP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00227___rplP-BL01044___rplP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00227___rplP-BL01044___rplP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00227___rplP
# 2: BL01044___rplP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity: 402/435 (92.4%)
# Similarity: 402/435 (92.4%)
# Gaps: 0/435 ( 0.0%)
# Score: 1878.0
#
#
#=======================================
BSNT_00227___ 1 ATGTTATTACCAAAACGCGTTAAATATCGCAGAGAGCATCGCGGAAAAAT 50
||||||.|.|||||||||||||||||||||||||||||||||||||||||
BL01044___rpl 1 ATGTTAATGCCAAAACGCGTTAAATATCGCAGAGAGCATCGCGGAAAAAT 50
BSNT_00227___ 51 GCGTGGCCGTGCGAAAGGCGGTACTGAAGTACATTTTGGAGAATTCGGTA 100
|||.|||||||||||||||||.||||||||.|||||.||.||||.|||||
BL01044___rpl 51 GCGCGGCCGTGCGAAAGGCGGCACTGAAGTGCATTTCGGTGAATACGGTA 100
BSNT_00227___ 101 TCCAAGCTCTTGAAGCTTCTTGGATTACTAACCGTCAAATCGAAGCTGCA 150
|||||||||..|||.||||||||||.||.|||||.|||||||||||.|||
BL01044___rpl 101 TCCAAGCTCAAGAATCTTCTTGGATCACAAACCGCCAAATCGAAGCAGCA 150
BSNT_00227___ 151 CGTATTGCGATGACTCGTTACATGAAACGTGGCGGTAAAGTTTGGATCAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BL01044___rpl 151 CGTATTGCGATGACTCGTTACATGAAACGTGGCGGTAAAGTTTGGATCAA 200
BSNT_00227___ 201 AATTTTCCCTTCTAAACCTTACACTGCTAAACCACTTGAGGTACGTATGG 250
|||||||||||||||.|||||.||.|||||.||.||.|||||.||.||||
BL01044___rpl 201 AATTTTCCCTTCTAAGCCTTATACAGCTAAGCCTCTAGAGGTTCGGATGG 250
BSNT_00227___ 251 GATCCGGTAAAGGGGCTCCAGAAGGTTGGGTAGCTGTTGTAAAACCGGGC 300
|.|||||||||||.|||||.|||||.||||||||||||||||||||||||
BL01044___rpl 251 GTTCCGGTAAAGGTGCTCCTGAAGGATGGGTAGCTGTTGTAAAACCGGGC 300
BSNT_00227___ 301 AAAGTTTTATTTGAAATTTCTGGTGTGTCTGAAGAGGTTGCTCGTGAAGC 350
||||||||||||||||||||||||||||||||.||.||.|||||.|||||
BL01044___rpl 301 AAAGTTTTATTTGAAATTTCTGGTGTGTCTGAGGAAGTCGCTCGCGAAGC 350
BSNT_00227___ 351 GCTTCGCCTTGCATCTCACAAATTGCCAATTAAAACGAAGTTCGTAAAAC 400
.|||||.|||||||||||||||||||||||||||||||||||||||||||
BL01044___rpl 351 TCTTCGTCTTGCATCTCACAAATTGCCAATTAAAACGAAGTTCGTAAAAC 400
BSNT_00227___ 401 GTGAAGAAATTGGTGGTGAATCAAATGAAAGCTAA 435
|||||||||||||||||||||||||||||||||||
BL01044___rpl 401 GTGAAGAAATTGGTGGTGAATCAAATGAAAGCTAA 435
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.