Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00230 and BL01041
See
Amino acid alignment /
Visit
BSNT_00230 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_00230___rplN.1.5803.seq
# -bsequence dna-align/BL01041___rplN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00230___rplN-BL01041___rplN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00230___rplN-BL01041___rplN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00230___rplN
# 2: BL01041___rplN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 369
# Identity: 329/369 (89.2%)
# Similarity: 329/369 (89.2%)
# Gaps: 0/369 ( 0.0%)
# Score: 1485.0
#
#
#=======================================
BSNT_00230___ 1 ATGATTCAACAAGAGACTCGTTTAAAAGTAGCTGACAACTCTGGCGCACG 50
|||||||||||||||||||||||||||||||||||.||||||||.||.||
BL01041___rpl 1 ATGATTCAACAAGAGACTCGTTTAAAAGTAGCTGATAACTCTGGTGCCCG 50
BSNT_00230___ 51 TGAAGTACTTACTATTAAAGTTCTTGGTGGTTCTGGACGTAAAACAGCTA 100
||||||..|.||.||.||.||.|||||||||||||||||.||||||||||
BL01041___rpl 51 TGAAGTGTTAACAATCAAGGTGCTTGGTGGTTCTGGACGCAAAACAGCTA 100
BSNT_00230___ 101 ACATTGGTGATGTAATTGTTTGCACGGTTAAACAAGCAACACCAGGAGGC 150
|||||||||||||.||||||||||||||||||||||||||||||||||||
BL01041___rpl 101 ACATTGGTGATGTCATTGTTTGCACGGTTAAACAAGCAACACCAGGAGGC 150
BSNT_00230___ 151 GTTGTCAAAAAAGGTGAAGTCGTAAAAGCTGTTATCGTTCGCACTAAAAG 200
|||||||||||||||||.|||||.|.||||||..||||.||..||||.||
BL01041___rpl 151 GTTGTCAAAAAAGGTGATGTCGTGAGAGCTGTAGTCGTACGTTCTAAGAG 200
BSNT_00230___ 201 CGGAGCGCGCAGAAGTGACGGTTCATACATCAGCTTCGATGAGAATGCAT 250
|||.||.|||||||.||||||.||.|||||||..||||||||||||||||
BL01041___rpl 201 CGGTGCACGCAGAAATGACGGATCTTACATCAAATTCGATGAGAATGCAT 250
BSNT_00230___ 251 GTGTTATCATCCGTGACGACAAGAGCCCACGCGGAACTCGTATCTTCGGA 300
||||||||||||||||||||||.|||||.|||||||||||||||||||||
BL01041___rpl 251 GTGTTATCATCCGTGACGACAAAAGCCCGCGCGGAACTCGTATCTTCGGA 300
BSNT_00230___ 301 CCAGTTGCTCGTGAATTGCGTGAAAACAACTTTATGAAAATTGTTTCTCT 350
||.||.||.||||||.|.|||||.||||||||.|||||||||||||||||
BL01041___rpl 301 CCTGTAGCACGTGAACTTCGTGATAACAACTTCATGAAAATTGTTTCTCT 350
BSNT_00230___ 351 AGCTCCAGAAGTTATCTAA 369
||||||||||||..|.|||
BL01041___rpl 351 AGCTCCAGAAGTACTTTAA 369
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.