Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00234 and BL01037
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_00234___rpsH.1.5803.seq
# -bsequence dna-align/BL01037___rpsH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00234___rpsH-BL01037___rpsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00234___rpsH-BL01037___rpsH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00234___rpsH
# 2: BL01037___rpsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 353/399 (88.5%)
# Similarity: 353/399 (88.5%)
# Gaps: 0/399 ( 0.0%)
# Score: 1581.0
#
#
#=======================================
BSNT_00234___ 1 ATGGTTATGACAGATCCAATTGCAGATATGCTAACTCGTATTCGCAATGC 50
|||||||||||||||||.||||||||||||||.|||||||||||.|||||
BL01037___rps 1 ATGGTTATGACAGATCCGATTGCAGATATGCTGACTCGTATTCGTAATGC 50
BSNT_00234___ 51 AAACATGGTACGTCATGAGAAGCTTGAAATTCCTGCTTCTAAATTGAAAA 100
||||||||||||||||||||||||.|||||||||||||||||.|||||||
BL01037___rps 51 AAACATGGTACGTCATGAGAAGCTCGAAATTCCTGCTTCTAAGTTGAAAA 100
BSNT_00234___ 101 GAGAAATTGCTGAAATTTTAAAGCGTGAAGGTTTCATTCGTGACGTTGAG 150
||||.||.||||||||.||.||..|.|||||||||||.||||||||.||.
BL01037___rps 101 GAGAGATCGCTGAAATCTTGAAAAGAGAAGGTTTCATCCGTGACGTAGAA 150
BSNT_00234___ 151 TTCGTAGAAGACAGCAAACAAGGTATTATCCGCGTTTTCTTGAAATACGG 200
|||.|.|||||.|.|||||||||.||.|||||.|||||||||||||||||
BL01037___rps 151 TTCATTGAAGATAACAAACAAGGCATCATCCGTGTTTTCTTGAAATACGG 200
BSNT_00234___ 201 ACAAAACAACGAGCGCGTTATCACTGGTCTTAAAAGAATCAGCAAGCCTG 250
|||||||||||||||.||.||||||||.|||||||||||||||||.||.|
BL01037___rps 201 ACAAAACAACGAGCGTGTCATCACTGGCCTTAAAAGAATCAGCAAACCAG 250
BSNT_00234___ 251 GTTTGCGTGTTTATGCTAAATCTAATGAAGTACCTCGCGTACTTAACGGT 300
||.||||.|||||.|||||.||.||.|||||.||||||||.||||||||.
BL01037___rps 251 GTCTGCGCGTTTACGCTAAGTCAAACGAAGTGCCTCGCGTGCTTAACGGA 300
BSNT_00234___ 301 CTTGGAATCGCGATTATTTCTACATCACAAGGTGTTTTAACGGACAAAGA 350
|||||||||||.|||.|||||||||||||||||||.||||||||.|||||
BL01037___rps 301 CTTGGAATCGCAATTCTTTCTACATCACAAGGTGTGTTAACGGATAAAGA 350
BSNT_00234___ 351 AGCCCGTGCAAAACAAGCTGGTGGAGAAGTTCTAGCATACGTTTGGTAA 399
||||||.||.|||||.|||||.||||||||..|||||||||||||||||
BL01037___rps 351 AGCCCGCGCTAAACAGGCTGGCGGAGAAGTATTAGCATACGTTTGGTAA 399
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