Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00239 and BL01032
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_00239___rplO.1.5803.seq
# -bsequence dna-align/BL01032___rplO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00239___rplO-BL01032___rplO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00239___rplO-BL01032___rplO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00239___rplO
# 2: BL01032___rplO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 399/441 (90.5%)
# Similarity: 399/441 (90.5%)
# Gaps: 0/441 ( 0.0%)
# Score: 1827.0
#
#
#=======================================
BSNT_00239___ 1 ATGAAACTTCATGAATTAAAACCTTCAGAAGGTTCACGCAAAACGCGTAA 50
||||||||||||||||||||.||..|||||||||||||.||||||||.||
BL01032___rpl 1 ATGAAACTTCATGAATTAAAGCCCGCAGAAGGTTCACGTAAAACGCGCAA 50
BSNT_00239___ 51 TCGCGTAGGTCGTGGTATTGGTTCTGGCAACGGTAAAACAGCTGGTAAAG 100
.||||||||||||||||||||||||||.||||||||||||||||||||||
BL01032___rpl 51 CCGCGTAGGTCGTGGTATTGGTTCTGGTAACGGTAAAACAGCTGGTAAAG 100
BSNT_00239___ 101 GTCACAAAGGTCAAAACGCTCGTTCTGGCGGCGGTGTACGCCCTGGATTC 150
||||.|||||||||||||||||||||||||||||||||||.|||||||||
BL01032___rpl 101 GTCATAAAGGTCAAAACGCTCGTTCTGGCGGCGGTGTACGTCCTGGATTC 150
BSNT_00239___ 151 GAGGGGGGACAAATGCCTTTATTCCAACGTCTTCCTAAACGCGGTTTCAC 200
|||||.||||||||||||||||||||||||||||||||||||||||||||
BL01032___rpl 151 GAGGGTGGACAAATGCCTTTATTCCAACGTCTTCCTAAACGCGGTTTCAC 200
BSNT_00239___ 201 TAACATCAACCGCAAGGAATACGCTGTAGTCAACCTAGACAAATTGAACG 250
.|||||||||||||||||||.||||||.|||||||||||||||.|.|||.
BL01032___rpl 201 AAACATCAACCGCAAGGAATTCGCTGTGGTCAACCTAGACAAACTCAACA 250
BSNT_00239___ 251 GTTTTGCAGAAGGAACGGAAGTCACTCCTGAACTTCTTCTAGAGACTGGT 300
|.|||||||||||.||||||||.|||||||||||||||.||||.||.|||
BL01032___rpl 251 GCTTTGCAGAAGGGACGGAAGTTACTCCTGAACTTCTTTTAGAAACAGGT 300
BSNT_00239___ 301 GTTATTAGCAAACTTAATGCAGGAGTAAAGATTCTTGGCAACGGTAAATT 350
||.||.|||||..|.||..|.|||||.||.|||||||||.||||||||||
BL01032___rpl 301 GTAATCAGCAAGTTGAAATCTGGAGTGAAAATTCTTGGCGACGGTAAATT 350
BSNT_00239___ 351 AGAGAAAAAATTAACTGTAAAAGCCAATAAATTCTCTGCTTCTGCGAAAG 400
|||.||.|||||||||||.|||||||||||||||||.||||||||.|||.
BL01032___rpl 351 AGAAAAGAAATTAACTGTTAAAGCCAATAAATTCTCCGCTTCTGCTAAAC 400
BSNT_00239___ 401 AAGCTGTTGAAGCTGCTGGCGGTACAGCTGAGGTGATCTAA 441
||||..||||.||||||||||||||||||||||||||||||
BL01032___rpl 401 AAGCAATTGAGGCTGCTGGCGGTACAGCTGAGGTGATCTAA 441
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