Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00241 and BL01030

See Amino acid alignment / Visit BSNT_00241 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence dna-align/BSNT_00241___adk.1.5803.seq
#    -bsequence dna-align/BL01030___adk.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00241___adk-BL01030___adk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00241___adk-BL01030___adk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00241___adk
# 2: BL01030___adk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 663
# Identity:     526/663 (79.3%)
# Similarity:   526/663 (79.3%)
# Gaps:          18/663 ( 2.7%)
# Score: 2088.0
# 
#
#=======================================

BSNT_00241___      1 ATGAACTTAGTCTTAATGGGGCTTCCTGGTGCCGGTAAAGGCACACAGGG     50
                     ||||||||||||||||||||.||.|||||.|||||||||||.|||||||.
BL01030___adk      1 ATGAACTTAGTCTTAATGGGACTGCCTGGAGCCGGTAAAGGGACACAGGC     50

BSNT_00241___     51 CGAACGAATTGTTGAGGATTATGGGATTCCTCATATCTCAACAGGAGATA    100
                     .|||||.||||||||.||||.||||||.||||||||||||||||||||.|
BL01030___adk     51 TGAACGGATTGTTGAAGATTTTGGGATACCTCATATCTCAACAGGAGACA    100

BSNT_00241___    101 TGTTCCGTGCTGCTATGAAAGAAGAAACACCACTCGGACTTGAAGCAAAA    150
                     |||||||.|||||.||||||||||||||....||.|||||.|||||.|||
BL01030___adk    101 TGTTCCGCGCTGCGATGAAAGAAGAAACGGATCTGGGACTCGAAGCCAAA    150

BSNT_00241___    151 TCTTATATTGATAAGGGAGAGCTCGTACCTGACGAAGTCACAATCGGAAT    200
                     ||.||.||||||||.||.|||||.||.||.||.|||||.|||||.||.||
BL01030___adk    151 TCATACATTGATAAAGGTGAGCTTGTTCCGGATGAAGTGACAATTGGTAT    200

BSNT_00241___    201 TGTAAAAGAGAGACTTGGCAAAGATGATTGTGAAAGAGGTTTTCTTCTGG    250
                     |||.|..||||||||||||||..||||||||||..|||||||||||||||
BL01030___adk    201 TGTCAGGGAGAGACTTGGCAAGAATGATTGTGACGGAGGTTTTCTTCTGG    250

BSNT_00241___    251 ACGGATTTCCGCGAACAGTCGCTCAAGCCGAAGCTCTTGAAGAAATTCTT    300
                     |||||||||||.||||||||||||||||.|||||.|||||.|||||||||
BL01030___adk    251 ACGGATTTCCGAGAACAGTCGCTCAAGCTGAAGCACTTGAGGAAATTCTT    300

BSNT_00241___    301 -GAGGAATACGGCAAGCCGATTGATTATGTCATTAACATTGAAGTCGACA    349
                      .||||.| .||||||.|||||||..|||||||.||||||.|||||||.|
BL01030___adk    301 AAAGGACT-TGGCAAGTCGATTGACCATGTCATCAACATTCAAGTCGATA    349

BSNT_00241___    350 AAGACGCTCTCATGGAACGTCTGACTGGACGCAGAATTTGCAGTGTTTGC    399
                     ||||.||..|.||||||||||||||.|||||||||||.||||.....|||
BL01030___adk    350 AAGATGCATTGATGGAACGTCTGACAGGACGCAGAATCTGCAAAAACTGC    399

BSNT_00241___    400 GGCACAACCTATCATTTAGTCTTTAATCCGCC-------GAAAACGCCGG    442
                     ||..||||.|||||||||||||||||||||||       |||||      
BL01030___adk    400 GGTGCAACTTATCATTTAGTCTTTAATCCGCCTGCAAAAGAAAA------    443

BSNT_00241___    443 GTATTTGTGATAAAGACGGAGGCGAACTCTATCAACGGGCAGATGATAAT    492
                      |.|.||.||.||....|||||.||.||.|||||.||.|.|||.||||||
BL01030___adk    444 -TGTATGCGACAAGTGTGGAGGAGAGCTTTATCAGCGTGAAGACGATAAT    492

BSNT_00241___    493 GAGGAAACCGTCTCTAAACGGCTTGAGGTAAACATGAAGCAAACTCAGCC    542
                     ||.|..|||||.||.|..|||.|.|||||.||||||||||||||.|||||
BL01030___adk    493 GAAGCTACCGTATCCACGCGGTTAGAGGTCAACATGAAGCAAACCCAGCC    542

BSNT_00241___    543 TTTACTTGATTTCTATTCAGAGAAAGGTTATCTTGCAAACGTGAATGGCC    592
                     ||||||.|||||||||..|||.|||||.|||||.|.||||.|..|.||.|
BL01030___adk    543 TTTACTCGATTTCTATGAAGATAAAGGATATCTCGTAAACATTGACGGGC    592

BSNT_00241___    593 AACAGGACATTCAA-GACGTTTATGCAGATGTGAAGGATCTTCTTGGAGG    641
                     |..||.||| |||| ||.|||||.||.|||.|.|||||.|||||.|||||
BL01030___adk    593 AGAAGCACA-TCAATGAAGTTTACGCTGATATAAAGGAGCTTCTCGGAGG    641

BSNT_00241___    642 ATTAAAAAAATGA    654
                     .....|.||||||
BL01030___adk    642 CCGGGACAAATGA    654


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