Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00246 and BL01026
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00246___rpsM.1.5803.seq
# -bsequence dna-align/BL01026___rpsM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00246___rpsM-BL01026___rpsM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00246___rpsM-BL01026___rpsM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00246___rpsM
# 2: BL01026___rpsM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity: 336/366 (91.8%)
# Similarity: 336/366 (91.8%)
# Gaps: 0/366 ( 0.0%)
# Score: 1560.0
#
#
#=======================================
BSNT_00246___ 1 ATGGCTCGTATTGCTGGTGTAGATATCCCACGTGACAAACGTGTTGTTAT 50
|||||||||||||||||||||||||||||||||||.||||||||||||||
BL01026___rps 1 ATGGCTCGTATTGCTGGTGTAGATATCCCACGTGATAAACGTGTTGTTAT 50
BSNT_00246___ 51 TTCTTTAACATACATCTTCGGAATTGGCCGCACAACGGCTCAGCAAGTTT 100
|||.||||||||||||||.|||||.||.||.|||||||||||||||.|.|
BL01026___rps 51 TTCATTAACATACATCTTTGGAATCGGTCGTACAACGGCTCAGCAAATCT 100
BSNT_00246___ 101 TAAAAGAAGCTGGAGTTTCAGAAGATACTCGTGTGCGCGATCTTACTGAA 150
|||||||||||||||||||.|||||||||||.||.||.|||.|.||||||
BL01026___rps 101 TAAAAGAAGCTGGAGTTTCTGAAGATACTCGCGTTCGTGATTTGACTGAA 150
BSNT_00246___ 151 GAAGAACTTGGTAAAATCCGTGATATTATTGACAAACTGAAAGTAGAAGG 200
|||||||||||||||||||||||..|.||.||||||.|||||||||||||
BL01026___rps 151 GAAGAACTTGGTAAAATCCGTGACGTGATCGACAAATTGAAAGTAGAAGG 200
BSNT_00246___ 201 TGACCTTCGCCGTGAAGTTTCTCTTAATATCAAACGTCTGATCGAAATCG 250
||||||||||||||||||.||||||||.||||||||||||||||||||||
BL01026___rps 201 TGACCTTCGCCGTGAAGTGTCTCTTAACATCAAACGTCTGATCGAAATCG 250
BSNT_00246___ 251 GAAGCTACCGCGGAATCCGTCATCGCAGAGGATTACCTGTTCGCGGACAA 300
||||||||||||||||.||||||||..|.|||||.|||||||||||.|||
BL01026___rps 251 GAAGCTACCGCGGAATTCGTCATCGTCGCGGATTGCCTGTTCGCGGTCAA 300
BSNT_00246___ 301 AACTCTAAAAACAACGCGCGTACTCGTAAAGGTCCGCGTCGTACTGTAGC 350
||..|||||||.||||||||||||||||||||||||||||||||||||||
BL01026___rps 301 AATACTAAAAATAACGCGCGTACTCGTAAAGGTCCGCGTCGTACTGTAGC 350
BSNT_00246___ 351 TAACAAGAAAAAATAA 366
||||||||||||||||
BL01026___rps 351 TAACAAGAAAAAATAA 366
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