Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00249 and BL01024
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00249___rplQ.1.5803.seq
# -bsequence dna-align/BL01024___rplQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00249___rplQ-BL01024___rplQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00249___rplQ-BL01024___rplQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00249___rplQ
# 2: BL01024___rplQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 323/363 (89.0%)
# Similarity: 323/363 (89.0%)
# Gaps: 0/363 ( 0.0%)
# Score: 1455.0
#
#
#=======================================
BSNT_00249___ 1 ATGTCATACAGAAAACTAGGACGTACGAGTGCACAGCGTAAAGCTATGCT 50
|||||||||||||||||||||||.||.|||||||||||||||||.|||||
BL01024___rpl 1 ATGTCATACAGAAAACTAGGACGCACTAGTGCACAGCGTAAAGCAATGCT 50
BSNT_00249___ 51 TCGTGATCTTACAACTGATTTGATCATCAACGAAAGAATCGAAACAACTG 100
.||||||||||||||.||.||||||||||||||.|||||.||||||||.|
BL01024___rpl 51 GCGTGATCTTACAACAGACTTGATCATCAACGAGAGAATTGAAACAACAG 100
BSNT_00249___ 101 AAACACGTGCGAAAGAACTTCGCTCTGTAGTTGAAAAAATGATCACGCTT 150
||.|.||.||||||||||||||||||||.||.|||||||||||.||.|||
BL01024___rpl 101 AAGCTCGCGCGAAAGAACTTCGCTCTGTTGTAGAAAAAATGATTACACTT 150
BSNT_00249___ 151 GGCAAACGCGGTGATCTTCACGCTCGTCGTCAAGCTGCTGCATACATCCG 200
|||||.|||||.|||.|.|||||.||.||.|||||.||||||||||||||
BL01024___rpl 151 GGCAAGCGCGGAGATTTACACGCACGCCGCCAAGCAGCTGCATACATCCG 200
BSNT_00249___ 201 CAACGAGGTTGCAAACGAAGAAAATAACCAAGATGCACTTCAAAAATTAT 250
|||.|||||||||.|.|.|||.||.|||||||||||||||||||||.|.|
BL01024___rpl 201 CAATGAGGTTGCAGATGCAGAGAAAAACCAAGATGCACTTCAAAAACTTT 250
BSNT_00249___ 251 TCTCTGACATTGCAACTCGTTACGAGGAGCGCCAAGGCGGATACACACGT 300
|||||||..|.|||.|||||||.||.||||||||||||||||||||||||
BL01024___rpl 251 TCTCTGATGTAGCACCTCGTTATGAAGAGCGCCAAGGCGGATACACACGT 300
BSNT_00249___ 301 ATTATGAAGCTTGGTCCTCGCCGTGGTGACGGAGCACCAATGGCAATTAT 350
||||||||||||||||||||||||||||||||||||||||||||.||.||
BL01024___rpl 301 ATTATGAAGCTTGGTCCTCGCCGTGGTGACGGAGCACCAATGGCTATCAT 350
BSNT_00249___ 351 CGAATTGGTTTAA 363
|||||||||||||
BL01024___rpl 351 CGAATTGGTTTAA 363
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