Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00250 and BL01023

See Amino acid alignment / Visit BSNT_00250 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence dna-align/BSNT_00250___ybxA.1.5803.seq
#    -bsequence dna-align/BL01023___cbiO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00250___ybxA-BL01023___cbiO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00250___ybxA-BL01023___cbiO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00250___ybxA
# 2: BL01023___cbiO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 859
# Identity:     643/859 (74.9%)
# Similarity:   643/859 (74.9%)
# Gaps:          26/859 ( 3.0%)
# Score: 2328.0
# 
#
#=======================================

BSNT_00250___      1 ATGAATCAAAATCAGTTGAT--ATCG--GTAGAGGATATCGTATTTCGAT     46
                     |||||||||.|.|    |||  ||||  |.|||.||||||...|||||.|
BL01023___cbi      1 ATGAATCAAGAGC----GATTAATCGCTGCAGAAGATATCACGTTTCGCT     46

BSNT_00250___     47 ATCGGAAGGACGCAGAAAGACGAGCACTAGACGGCGTCTCCCTGCAGGTG     96
                     |.|.|||.||.|||||.||.|..||.||.||...|||.||..|.||.|||
BL01023___cbi     47 ACCAGAAAGATGCAGACAGGCCTGCGCTTGATCACGTATCTTTCCATGTG     96

BSNT_00250___     97 TATGAGGGTGAATGGCTTGCAATCGTAGGTCATAACGGTTCAGGGAAATC    146
                     |...|.||.|||||||||||.|||||.|||||.|||||||||||.||.||
BL01023___cbi     97 TCGAAAGGAGAATGGCTTGCGATCGTCGGTCACAACGGTTCAGGAAAGTC    146

BSNT_00250___    147 AACACTGGCCCGGGCATTGAATGGTTTAATTCTTCCTGAATCAGG--CGA    194
                     .||.||.|||||.||.||.||.||..|.|||||.|||||...|||  || 
BL01023___cbi    147 GACGCTCGCCCGTGCTTTAAACGGACTGATTCTGCCTGATGAAGGATCG-    195

BSNT_00250___    195 CATTGAGGTTGCCGGGATTCAA-TTGACAGAGGAATCTGTTTGGGAAGTG    243
                      |||.|.||.|.|||.| |||| .||||.||.||..|.||.|||||.||.
BL01023___cbi    196 -ATTAAAGTAGGCGGTA-TCAAGCTGACGGAAGAGACGGTCTGGGATGTC    243

BSNT_00250___    244 CGTAAGAAGATAGGTATGGTCTTTCAAAATCCGGATAACCAATTTGTCGG    293
                     ||.||.|||.|.||.|||||.|||||||||||||||||||||||||||||
BL01023___cbi    244 CGAAAAAAGGTCGGCATGGTGTTTCAAAATCCGGATAACCAATTTGTCGG    293

BSNT_00250___    294 AACGACTGTTCGCGATGATGTGGCTTTTGGTTTAGAAAACAATGGTGTAC    343
                     .||.||.||.|||||||||||||||||||||||||||||||..||.||.|
BL01023___cbi    294 GACAACCGTCCGCGATGATGTGGCTTTTGGTTTAGAAAACAGCGGAGTTC    343

BSNT_00250___    344 CGCGGGAAGAAATGATTGAGAGAGTAGACTGGGCAGTAAAACAGGTTAAT    393
                     |..|.|||||.|||.|.||.||.||.||.|||||.||..|||||||.||.
BL01023___cbi    344 CAAGAGAAGACATGGTGGAAAGGGTGGATTGGGCCGTTCAACAGGTGAAC    393

BSNT_00250___    394 ATGCAAGATTTTCTCGATCAAGAGCCGCACCATCTCTCCGGAGGCCAAAA    443
                     ||||||||.|||||||||||||||||||||||||||||.|||||.|||||
BL01023___cbi    394 ATGCAAGAATTTCTCGATCAAGAGCCGCACCATCTCTCGGGAGGACAAAA    443

BSNT_00250___    444 GCAGAGAGTTGCGATTGCGGGGGTTATTGCCGCACGTCCTGATATTATTA    493
                     ||||.|.||||||||||||||.||..||||.||.||.|||||.||.||.|
BL01023___cbi    444 GCAGCGTGTTGCGATTGCGGGAGTGCTTGCTGCCCGGCCTGACATCATGA    493

BSNT_00250___    494 TCTTAGATGAAGCAACATCCATGCTTGATCCGATCGGGCGAGAAGAAGTG    543
                     |..|.||.|||||.||.||||||||.||.|||||.|||||.|||||||||
BL01023___cbi    494 TTCTCGACGAAGCGACTTCCATGCTCGACCCGATGGGGCGGGAAGAAGTG    543

BSNT_00250___    544 CTTGAAACGGTAAGACATTTAAAAGAGCAGGGCATGGCGACTGTCATATC    593
                     ||.||.|||||.|||....|.|||||.||.||.||||..||.|||||.||
BL01023___cbi    544 CTGGATACGGTCAGAAGGCTGAAAGACCAAGGAATGGTTACGGTCATTTC    593

BSNT_00250___    594 CATTACACATGATCTGGATGAGGCAGCAAAAGCAGACAGGATCATTGTCA    643
                     .|||||.|||||..|..|.||.||.||.||.||.|||.|||||||.||||
BL01023___cbi    594 GATTACCCATGACTTAAACGAAGCCGCGAAGGCCGACCGGATCATCGTCA    643

BSNT_00250___    644 TGAATGGCGGTAAAAAATATGCTGAAGG---GCCGCCTGAAGAGATTTTT    690
                     ||||..||||||.|||||.|||.|||||   |||||..||||   |.|||
BL01023___cbi    644 TGAACAGCGGTAGAAAATTTGCCGAAGGCACGCCGCAGGAAG---TCTTT    690

BSNT_00250___    691 AAATTGAATAAAGAACTTGTTCGAATCGGGCTTGATTTACCCTTCTCATT    740
                     ....|||||.||||.||..||..|||||||||||||||.||.||.||.||
BL01023___cbi    691 CGTCTGAATCAAGATCTGATTAAAATCGGGCTTGATTTGCCATTTTCTTT    740

BSNT_00250___    741 CCAGCTTAGCCA---GCTTTTAAGAGAAAATGGACTGGCTTTGGAAGAAA    787
                     .|||||.|.|||   ||  |.||| ||||..||.||||||.||.|||...
BL01023___cbi    741 TCAGCTCACCCAAATGC--TGAAG-GAAAGCGGTCTGGCTCTGAAAGGCG    787

BSNT_00250___    788 ACCATTTGACTCAGGAAGGGCTGGTGAAAGAGCTGTGGACATTACAATCA    837
                     |.|||.||||.||.|||||..|||||||.|||||.||||||||..|||||
BL01023___cbi    788 ATCATCTGACACAAGAAGGATTGGTGAATGAGCTATGGACATTGAAATCA    837

BSNT_00250___    838 AAGATGTAG    846
                     |||||||||
BL01023___cbi    838 AAGATGTAG    846


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00250 and BL01023

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
