Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00256 and BL01018
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00256___rpsI.1.5803.seq
# -bsequence dna-align/BL01018___rpsI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00256___rpsI-BL01018___rpsI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00256___rpsI-BL01018___rpsI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00256___rpsI
# 2: BL01018___rpsI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 372/393 (94.7%)
# Similarity: 372/393 (94.7%)
# Gaps: 0/393 ( 0.0%)
# Score: 1776.0
#
#
#=======================================
BSNT_00256___ 1 TTGGCACAGGTTCAATATTACGGTACTGGCCGTCGTAAAAGCTCTGTAGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BL01018___rps 1 TTGGCACAGGTTCAATATTACGGTACTGGCCGTCGTAAAAGCTCTGTAGC 50
BSNT_00256___ 51 GCGTGTGCGTTTAGTTCCAGGAGAAGGCCGTATCGTCGTTAATAATCGTG 100
|||.||||||||||||||||||||||||||||||.||||.||||||||||
BL01018___rps 51 GCGCGTGCGTTTAGTTCCAGGAGAAGGCCGTATCATCGTGAATAATCGTG 100
BSNT_00256___ 101 AAATCAGCGAACACATCCCATCTGCAGCTTTAATCGAAGATATCAAACAA 150
||||||||||.||||||||||||||||||.||||||||||||||||||||
BL01018___rps 101 AAATCAGCGAGCACATCCCATCTGCAGCTCTAATCGAAGATATCAAACAA 150
BSNT_00256___ 151 CCATTAACTTTGACTGAAACAGCTGGCACTTATGATGTTTTAGTAAACGT 200
||||||||||||||||||||||||||.||||||||.||||||||||||||
BL01018___rps 151 CCATTAACTTTGACTGAAACAGCTGGTACTTATGACGTTTTAGTAAACGT 200
BSNT_00256___ 201 ACATGGAGGCGGCTTATCTGGTCAAGCTGGAGCAATCCGTCACGGTATCG 250
|||||||||||||||.||.|||||||||||||||||||||||||||||||
BL01018___rps 201 ACATGGAGGCGGCTTCTCCGGTCAAGCTGGAGCAATCCGTCACGGTATCG 250
BSNT_00256___ 251 CTCGTGCTTTGCTTGAAGCAGATCCAGAATACCGTACAACTCTTAAACGT 300
|.||.||||||||||||||||||||.|||||||||.|||||||.||||||
BL01018___rps 251 CCCGCGCTTTGCTTGAAGCAGATCCGGAATACCGTTCAACTCTAAAACGT 300
BSNT_00256___ 301 GCAGGTCTTCTGACTCGTGACGCTCGTATGAAAGAACGTAAAAAATACGG 350
||.|||||.||||||||||||||.|||||||||||.||||||||||||||
BL01018___rps 301 GCCGGTCTACTGACTCGTGACGCACGTATGAAAGAGCGTAAAAAATACGG 350
BSNT_00256___ 351 TCTTAAAGGCGCTCGTCGTGCACCTCAGTTCTCAAAACGTTAA 393
.|||||||||||.||.|||||||||||||||||||||||||||
BL01018___rps 351 ACTTAAAGGCGCACGCCGTGCACCTCAGTTCTCAAAACGTTAA 393
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