Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00260 and BL01017
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00260___ybaK.1.5803.seq
# -bsequence dna-align/BL01017___ybaK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00260___ybaK-BL01017___ybaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00260___ybaK-BL01017___ybaK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00260___ybaK
# 2: BL01017___ybaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 508
# Identity: 284/508 (55.9%)
# Similarity: 284/508 (55.9%)
# Gaps: 128/508 (25.2%)
# Score: 687.0
#
#
#=======================================
BSNT_00260___ 1 ATGG---CAGAAGTACTGTCTTTTATGGATGTGAAACGCCAAAAG----- 42
|||| |.|..||| |||||||...|||..||| ||||||
BL01017___yba 1 ATGGGGACGGTCGTA---TCTTTTAACAATGAAAAA---CAAAAGAAGCA 44
BSNT_00260___ 43 GAT---TTTGAATTAGAAAAGAACT--TGCTCAAAGAACTCTCTCTGAGA 87
||| ||||.| ||||.|.|| |||.| |||||.|||.||..|
BL01017___yba 45 GATCAATTTGGA----AAAACAGCTTCTGCGC---GAACTGTCTTTGGAA 87
BSNT_00260___ 88 CAAATTATCCAGTCTGTTAAGGATTGTTTAGAACCATTATTTCCATTTTT 137
.||||..|..|.||||...||||.||.||.|..||..|.||||..|||||
BL01017___yba 88 AAAATGCTGAATTCTGCAGAGGAATGCTTTGCTCCTCTTTTTCACTTTTT 137
BSNT_00260___ 138 ------ACATGATGAACGAGATAT----TATTACCGAAGGCTGTATTGAT 177
.||| ||| ||||| ||| ||.|||||.||.||.
BL01017___yba 138 TTCTAAGCAT-----ACG-GATATCTTATAT----GACGGCTGCATCGAC 177
BSNT_00260___ 178 TTTGCTATAGAAGCCTATTTGTT---AGGCGGGCGTTTTGGGATATTCGG 224
|||||.||.||.||.||||||.| ||.||.| |..||||..|||||
BL01017___yba 178 TTTGCCATTGAGGCATATTTGCTGGGAGCCGAG---TACGGGAAGTTCGG 224
BSNT_00260___ 225 CTATTACGGAGAATCCATGCA------GAGTATCAGTGCCCGCTCTGCAA 268
||||.||||||||.||.|.|| ||..|| ||||||.|.||
BL01017___yba 225 CTATCACGGAGAACCCGTTCATCGAGCGATGAT------CCGCTCAGAAA 268
BSNT_00260___ 269 GAGAAGAAGAAGAGCTACGTATG---GAGTTTTTTGATTAT--------- 306
.|||||||.||.|||||| || |||.|||.|||.|||
BL01017___yba 269 AAGAAGAAAAACAGCTAC---TGCACGAGCTTTATGAATATGCTGTCAGC 315
BSNT_00260___ 307 --CTCTATAATTGGATACACGAGCAATACGCAACATTTGATAA-----AA 349
.||| ||| || ||| ||| ||
BL01017___yba 316 TGGTCT--------------GAG------GC----TTT--TAATGTTCAA 339
BSNT_00260___ 350 ACACGGTTTATGAAGCG---------GCACGC---AAGTTCAT-TAAAGA 386
.|.|.|||||||.|| ||..|| .|.||||| .||||
BL01017___yba 340 --GCTGCTTATGAACCGCTCTATTATGCCTGCGAATACTTCATCCAAAG- 386
BSNT_00260___ 387 TTGGTGGACAGCAGGGTTTGTTCAAAGAGAAAAACAGTGTAAGCTTCGCA 436
.|||||||..|.|||.||....||..|.||||.||..|.|||||||||..
BL01017___yba 387 CTGGTGGAAGGAAGGCTTCAGCCAGCGGGAAAGACGCTTTAAGCTTCGGC 436
BSNT_00260___ 437 TGCGGTAA 444
|..|.|||
BL01017___yba 437 TCAGATAA 444
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