Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00262 and BL01016
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00262___cwlD.1.5803.seq
# -bsequence dna-align/BL01016___cwlD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00262___cwlD-BL01016___cwlD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00262___cwlD-BL01016___cwlD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00262___cwlD
# 2: BL01016___cwlD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 727
# Identity: 520/727 (71.5%)
# Similarity: 520/727 (71.5%)
# Gaps: 26/727 ( 3.6%)
# Score: 1711.0
#
#
#=======================================
BSNT_00262___ 1 ATGAGGAAAAAGCTTAAATGGCTCAGTTTTTTGCTAGGCTTCATCATATT 50
||||.||||||..|.|||||||||.|.|||||.||.|||||..||.|.||
BL01016___cwl 1 ATGAAGAAAAAAATAAAATGGCTCGGGTTTTTACTCGGCTTTGTCGTTTT 50
BSNT_00262___ 51 ACTA--TTTCTGTTCAAGTATCAGTTCAGCAATAACGACTCTTGGAAGCC 98
|.|| |||.| ||||| |||||.||||.||||.|.||.||||||..|.|
BL01016___cwl 51 ATTATGTTTAT-TTCAA-TATCAATTCAACAATGATGATTCTTGGCGGTC 98
BSNT_00262___ 99 GTGGAGCCTGCCCTTGAGCGGTAAAATCATTTATCTAGATCCAGGTCATG 148
.||||..||.||..|||||||.||||||||||||.|.|||||.||.||.|
BL01016___cwl 99 ATGGAATCTTCCGCTGAGCGGCAAAATCATTTATATTGATCCTGGACACG 148
BSNT_00262___ 149 GCGGGC-CTGACGGCGGAGCAGTC-GGCGGAAAGCTGTTAGAGAAGGATG 196
| |||| |.||.||.||.||| || .||||..|.||..|.||.||.||.|
BL01016___cwl 149 G-GGGCGCCGATGGAGGGGCA-TCAAGCGGTGAACTCCTTGAAAAAGACG 196
BSNT_00262___ 197 TTACCCTGGAAGTGGCCTTTAGAGTCAGGGATTATCTTCAAGAACAAGGA 246
|..|.||.|||||..||.|.|||.|||||||.|||||.||.||.||.||.
BL01016___cwl 197 TGGCTCTTGAAGTATCCCTAAGAATCAGGGACTATCTCCAGGAGCAGGGC 246
BSNT_00262___ 247 GCGCTT-GTTATCATGACCAGAGAAAGTGATACTGATCTCGCTCCAGAAG 295
|| ||| ||.||..||||..|.||....|||..||||||||||||.||||
BL01016___cwl 247 GC-CTTGGTGATGCTGACGCGGGAGGACGATCATGATCTCGCTCCTGAAG 295
BSNT_00262___ 296 GAACAAAAGG-CTATAGCCGACGAAAAGCTGAGGATCT-----AAGACAA 339
.|||.|..|| || .|||.||.||||||||||.|| || ||||
BL01016___cwl 296 AAACGAGGGGACT-CAGCAGAAGAAAAGCTGAAGA-CTTGCGGAAGA--- 340
BSNT_00262___ 340 CGAGTCAAATTAATAAACCATTCAGAGGCGGAGCTCTATATCAGCATTCA 389
|.|||.|..|.||.|||.||||.||.||.||.||.||..|||||||.||
BL01016___cwl 341 -GGGTCGATATGATCAACAATTCTGAAGCCGATCTTTACCTCAGCATCCA 389
BSNT_00262___ 390 TCTTAATGCGATTCCGTCACAAAAATGGAGCGGCGCCCAAAGCTTTTATT 439
|.|.|||||||||||.||......|||||||||.||.||||||||.||||
BL01016___cwl 390 TTTGAATGCGATTCCTTCCGCGCGATGGAGCGGTGCGCAAAGCTTCTATT 439
BSNT_00262___ 440 ACGGGAAATATGCGGAAAATGAGAAAGTCGCAAAATACATTCAGGATGAG 489
|||||.||||||..||.|||||....|.|||.||.|..|||||||||||.
BL01016___cwl 440 ACGGGCAATATGAAGAGAATGAACGGGCCGCCAAGTTTATTCAGGATGAA 489
BSNT_00262___ 490 CTGAGAAGAAATCTGGAAAACACAACCCGGAAAGCAAAGCGGATTCATGG 539
.|.|||...|||||.||||||||.||.|||||.|||||||||||.||.||
BL01016___cwl 490 TTAAGACATAATCTTGAAAACACGACGCGGAAGGCAAAGCGGATACACGG 539
BSNT_00262___ 540 TATCTACTTAATGCAAAACGTCACCAAACCGGGGGCGCTTATAGAAGTCG 589
.||.||.||.||||||||.||.|..||.||.|||||.|||.|.|||.|||
BL01016___cwl 540 AATTTATTTGATGCAAAATGTTAAAAAGCCCGGGGCCCTTGTCGAAATCG 589
BSNT_00262___ 590 GGTTTTTATCCAATCC--AAGTGAAGCAACGTTGCTCGGTAAACCGAAAT 637
|||||||.||.||.|| || ||.||||....|||.|..||.||.||||
BL01016___cwl 590 GGTTTTTGTCTAACCCGGAA--GAGGCAAAACAGCTGGCCAAGCCCAAAT 637
BSNT_00262___ 638 ATCAAGACAAGGTGGCATCTTCCATATATAAAGGCATTTTGCGATATTTC 687
||||.|||||..|.|||.|.|||.|.|||||||||.|.|||||.||.||.
BL01016___cwl 638 ATCAGGACAAAATCGCAGCATCCGTTTATAAAGGCGTATTGCGCTACTTT 687
BSNT_00262___ 688 ACAGAAAAAGGAGACCCTCCGGAGTAA 714
||||||.|..||||||||||.||.|||
BL01016___cwl 688 ACAGAAGACAGAGACCCTCCTGAATAA 714
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