Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01943 and BL01010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence dna-align/BSNT_01943___yjbO.1.5803.seq
# -bsequence dna-align/BL01010___yjbO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01943___yjbO-BL01010___yjbO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01943___yjbO-BL01010___yjbO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01943___yjbO
# 2: BL01010___yjbO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 955
# Identity: 623/955 (65.2%)
# Similarity: 623/955 (65.2%)
# Gaps: 134/955 (14.0%)
# Score: 1864.5
#
#
#=======================================
BSNT_01943___ 1 GTGGAGCATTTTTTTATCAGAAAGAACATTACTTCCGCTGAGGA---CGG 47
||.|.|.|||.|||.| |.|..||||| |||
BL01010___yjb 1 ---------------ATGAAACAGATCATAA---CAGAAGAGGACAGCGG 32
BSNT_01943___ 48 GATGACTGTAAAAGAATATG-CCGGTGAACTGGGAATTTCGAAACGTCTG 96
|.|...|.|.||||||||.| ||.|.| .|||||.|||||.|||.|..||
BL01010___yjb 33 GGTTCTTTTGAAAGAATACGTCCAGCG-GCTGGGCATTTCAAAAAGGATG 81
BSNT_01943___ 97 CTGACCGATATTAAGTTTGGCGGGGGAGACCTGCAGATTAACGGTGAGCA 146
|||||.||.||.||.||.||.||.||.||.||...|.|.|||||.|.|||
BL01010___yjb 82 CTGACGGACATCAAATTCGGAGGCGGCGATCTTTTGGTAAACGGCGGGCA 131
BSNT_01943___ 147 TGTGACGGTCAAATACGTT-TTGAAAGAGG----GAGATCTTCTTATCGT 191
|||.|||||||.||||||| ||.|||.||| |||.||.||.| ||
BL01010___yjb 132 TGTAACGGTCAGATACGTTCTTCAAAAAGGGGACGAGCTCGTCAT-TC-- 178
BSNT_01943___ 192 GAAGTTTCCTGAGGAACAGGTGAGCGAGAC---GCTGCTGGCAGAGCCTA 238
||||||||..||||.|..|||||||..| ||..|.||.||| |
BL01010___yjb 179 --AGTTTCCTCCGGAAAAAATGAGCGAATCTTTGCAACCGGAAGA----A 222
BSNT_01943___ 239 -TTCCGCTCGATATCCTTTAT--GAGGATGAACATGTGCTTGTGATAAAC 285
|.|||||..|||| |||.| ||.|||||.|||||.||.||..||||.
BL01010___yjb 223 GTGCCGCTTCATAT--TTTGTTCGAAGATGACCATGTCCTCGTCTTAAAT 270
BSNT_01943___ 286 AAGCAGCCGTATG--TGTCATCAATCCCTTCGAGAGAGCACCCCTCCGGC 333
||.||||| ||| |.||.||.||.||.|||.|.|||||.||.||.|||
BL01010___yjb 271 AAACAGCC--ATGCATTTCGTCGATTCCCTCGCGTGAGCATCCATCAGGC 318
BSNT_01943___ 334 AGCATTGCCAATGGAATTATTGATCATTATCAAAAAAACGGA-----GTG 378
||..|.||.||.||..|.|||.||.||||.| |.|||| ||.
BL01010___yjb 319 AGTCTGGCGAACGGTCTGATTCATTATTACC-----AGCGGACGGGCGTA 363
BSNT_01943___ 379 AGGGCGACAGTACATCTTGTCACCCGGCTAGACCGGGATACATCAGGTGT 428
...|||||.||.||.||.||.|.|.||||.|||||.||||||||.|||||
BL01010___yjb 364 CACGCGACCGTTCACCTGGTGAGCAGGCTTGACCGCGATACATCGGGTGT 413
BSNT_01943___ 429 CATGCTTGTTGCCAAGCATCGATTTGCCCACTCCATTTTATC--GTCTGC 476
||||||||||||||||||.||.||.||||||||..||||||| |.||
BL01010___yjb 414 CATGCTTGTTGCCAAGCACCGCTTCGCCCACTCGCTTTTATCGGGGCT-- 461
BSNT_01943___ 477 GCAAAAAAACG--GCCTTGTGAAACGCCGGTATGCG-GCAGTGGTTCACG 523
|||||||||.| ||| ||.|||||.|..||| || ||.||.||.||||
BL01010___yjb 462 GCAAAAAAAGGGAGCC--GTCAAACGGCAATAT-CGAGCGGTCGTCCACG 508
BSNT_01943___ 524 G-------GCGGATGGCACAGATGGAGGGAACAGTCGATGCTCCGATTGG 566
| ||||| ||| |.|||||||..|||||||.|||||.||
BL01010___yjb 509 GTTTGATCGCGGA------AGA-GCAGGGAACGATCGATGCGCCGATCGG 551
BSNT_01943___ 567 CAGA----CATCCTGACAGTATTATTGAACGGACGGTAACACCGGACGGC 612
.||| |||| .||.||.||.||.|||.||||||..||||||||.
BL01010___yjb 552 GAGAAAATCATC----GAGCATCATCGAGCGGGCGGTAATCCCGGACGGG 597
BSNT_01943___ 613 CAGAAGGCTGTTACTCATTTTTACGT-CACATG---TGCAAATG-ATGAC 657
||.||.||.||.||.|||||||..|| .|||.| |.||...| |||||
BL01010___yjb 598 CAAAAAGCAGTGACGCATTTTTGGGTGAACAGGCGTTTCAGCGGCATGAC 647
BSNT_01943___ 658 --ATGAC---CTCGGTGGCATTGCAGCTTGAGACTGGACGAACCCATCAA 702
|||.| .||.|| ||.||.||.||.|||||||||||.
BL01010___yjb 648 GGATGTCTCTATCCGT----------CTGGAAACCGGGCGAACCCATCAG 687
BSNT_01943___ 703 ATTCGTGTTCATATGAGCTATCTCGGGCACCCGTTGTGCGGCGATACACT 752
||.||.||.||||||||..||.||||..|.||.||||||||.|||||.||
BL01010___yjb 688 ATCCGCGTCCATATGAGTCATATCGGATATCCCTTGTGCGGTGATACGCT 737
BSNT_01943___ 753 GTACGGCGGAA--CGAGACAGGA--AATTGGCCGGCAGGCTCTGCACAGC 798
||||||.|||| ||.|.|...| ||| ||||||||.||.|||||.
BL01010___yjb 738 GTACGGGGGAACCCGCGGCTTCATCAAT----CGGCAGGCGCTCCACAGT 783
BSNT_01943___ 799 GAGCATCTTTCATTTATCCATCCGCTGACACA---GAAGAACATGACGTT 845
|||...||..|||||.|.||||||.| |||| |||||.| |||||||
BL01010___yjb 784 GAGAGGCTGACATTTTTTCATCCGTT--CACAATGGAAGAGC-TGACGTT 830
BSNT_01943___ 846 TCATGCTCCACTGCCTCAGGACATGAGAAAACTGATAAAAGGAGAGAATC 895
.||.||.||..||||..|.||.||||||.|..||||| |||||
BL01010___yjb 831 CCAAGCGCCGGTGCCGAATGATATGAGACAGTTGATA----GAGAG---- 872
BSNT_01943___ 896 ATTGA 900
.|||
BL01010___yjb 873 -CTGA 876
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