Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01267 and BL00961
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence dna-align/BSNT_01267.1.5803.seq
# -bsequence dna-align/BL00961___yflT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01267-BL00961___yflT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01267-BL00961___yflT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01267
# 2: BL00961___yflT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity: 132/349 (37.8%)
# Similarity: 132/349 (37.8%)
# Gaps: 191/349 (54.7%)
# Score: 536.0
#
#
#=======================================
BSNT_01267 0 -------------------------------------------------- 0
BL00961___yfl 1 ATGAAACCAGTAGTAAGACAATATACAAACGATGAAAAACTGATGAAGGA 50
BSNT_01267 0 -------------------------------------------------- 0
BL00961___yfl 51 TGTTGAGGAACTCAGGGAAATCGGAGTTGCAAGAGAAGATATTTACGTTT 100
BSNT_01267 0 -------------------------------------------------- 0
BL00961___yfl 101 TGTCACATGACGACGACCGTACTGAAAGACTTGCAGACAACGCGGATGCC 150
BSNT_01267 1 ---------------------------------------GTGGGAAATAT 11
||.||.|||||
BL00961___yfl 151 AATACGATTGGAGCCGAAGAGACAGGCATCAAAAATGCCGTCGGCAATAT 200
BSNT_01267 12 CTTCAATAAAAAAGGAGACGAGCTCCGCAATAAAATTCACGAAATCGGTT 61
||||||.||||||||.|||||||||||||||||||||||.||.|||||.|
BL00961___yfl 201 CTTCAACAAAAAAGGGGACGAGCTCCGCAATAAAATTCATGAGATCGGCT 250
BSNT_01267 62 TTTCTGAAGATGAAGCCGCTCAATTTGAAAAAC-GCTTAGATGAAGGAAA 110
||||..||.|.|||||.|..|||||.||.|||| |||| |||||||||||
BL00961___yfl 251 TTTCAAAACAAGAAGCAGAACAATTCGAGAAACAGCTT-GATGAAGGAAA 299
BSNT_01267 111 AGTGCTTCTCTTTGTGACAGATAACGAAAAAGTGAAAGCTTGGGCATAA 159
|||.||.|||||.||.||.|||.|.||||||||||||.|.||||.||||
BL00961___yfl 300 AGTCCTCCTCTTCGTTACGGATCATGAAAAAGTGAAATCCTGGGTATAA 348
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