Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04397 and BL00957
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:34
# Commandline: needle
# -asequence dna-align/BSNT_04397___bioI.1.5803.seq
# -bsequence dna-align/BL00957___bioI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04397___bioI-BL00957___bioI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04397___bioI-BL00957___bioI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04397___bioI
# 2: BL00957___bioI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1314
# Identity: 836/1314 (63.6%)
# Similarity: 836/1314 (63.6%)
# Gaps: 198/1314 (15.1%)
# Score: 2317.0
#
#
#=======================================
BSNT_04397___ 1 ATGATGTCGATTGCTTTTATTTTTGAACAGAAAGGAGAAAATCACGTGAC 50
|||.|| ||||||..| ||||.|
BL00957___bio 1 ---ATGACG-----------------ACAGAACTG-------CACGAG-- 21
BSNT_04397___ 51 AATTGCATCGTCAA--CTG-CATC---TTCTGAGTTTTTGAAAAACCCAT 94
|||..|.|.| ||| .||| |||.||.||||.||.|.|.||||
BL00957___bio 22 ----GCAGGGCCGAGCCTGAAATCGGATTCGGATTTTTGGAGAGATCCAT 67
BSNT_04397___ 95 ATTCT-TTTTACGA-CA-CATTGCGAGCTGTTCATCCTATCTATAAAGGG 141
| ||| |||||||| || | ||||..|..||||||||.|.||||||||.
BL00957___bio 68 A-TCTGTTTTACGATCAGC--TGCGGTCCATTCATCCTGTATATAAAGGA 114
BSNT_04397___ 142 A--GTTTCTTAAAATACCCGGGCTGGTATGTCACAGGATATGAAGAAACG 189
| ||| |||||..|.|||||||||||||||||.||||||||||||.||
BL00957___bio 115 ACCGTT--TTAAAGCATCCGGGCTGGTATGTCACCGGATATGAAGAAGCG 162
BSNT_04397___ 190 GCTGCTATTTTGAAAGATGCGAGATTCAAAGTCCGCACCCCGCTGCCTGA 239
||.||.||||||||.||..||..|||.|.|..||||...||.||.||.||
BL00957___bio 163 GCAGCGATTTTGAAGGAACCGGCATTTATAAACCGCGTTCCTCTCCCAGA 212
BSNT_04397___ 240 GAGC-TCAACCAAATATCAGGACCTTTCA--CATGTGCA---AAATCAAA 283
||| ||.||.||||||.|..|.| |||| .|| |||| |||| |
BL00957___bio 213 -AGCTTCTACTAAATATGAACAAC-TTCAGCGAT-TGCAGCGAAAT---A 256
BSNT_04397___ 284 TGATGCTGTTTCAGAACCAGCCTGATCATAGACGATTGCGGACGCTTGCC 333
|||||||||||||.||..||.|.|..||||..||..||||||||.|||||
BL00957___bio 257 TGATGCTGTTTCAAAATGAGTCCGGCCATAAGCGGATGCGGACGATTGCC 306
BSNT_04397___ 334 AGCGGAGCGTTTACGCCG-AGAGCGACAGAGAGTTATCAGCC---GTATA 379
.||..||..||.|.|||| ||| .|||.|..|.|| ||.||| .||||
BL00957___bio 307 GGCAAAGAATTCATGCCGCAGA-AGACGGCAACTT-TCCGCCCTGCTATA 354
BSNT_04397___ 380 TCATTGAAACTGTCCACCAATTGCTTGATCAAGTGCAAGGTGAA---AAA 426
..| |||||.|||||..|||||||.|||||..| |||| ||.
BL00957___bio 355 GAA--GAAACCGTCCATGAATTGCTCGATCAGCT------TGAAAACAAG 396
BSNT_04397___ 427 AAGATGGAGGTCA---TTTCGGACTTTGCTTTTCCTTTAGCAAGCTTTGT 473
||||.||.||.|| |.|||||.||.||.||||||||.||||||.||.|
BL00957___bio 397 AAGACGGCGGACATGGTATCGGAATTCGCCTTTCCTTTGGCAAGCCTTAT 446
BSNT_04397___ 474 CATCGCTAACATTATAGGTGTACCGGAGGAAGATAGGGAGCAATTAAAGG 523
|||.||...|||..|.||.||.|||||.||.||..||.|.|||||.|.|.
BL00957___bio 447 CATTGCCGGCATGCTCGGCGTCCCGGAAGAGGAATGGTACCAATTCAGGC 496
BSNT_04397___ 524 AGTGGGCTGCGAGTCTCATTCAAACGATTGATTTTACCCGGTCAAGAAAG 573
|.|||.|.|||..|||||||||||||||.|||||.|||||..||.|||||
BL00957___bio 497 AATGGACGGCGGATCTCATTCAAACGATCGATTTGACCCGTACACGAAAG 546
BSNT_04397___ 574 GCATTAACAGAGGGCAATCATATGGCTGTG----------CAGGCT-ATG 612
|.| |.||||| |.|||.||| ||.||| |.|
BL00957___bio 547 GTA-------ATGGCAA----AAGGCGGTGATACCGTTGCCAAGCTGACG 585
BSNT_04397___ 613 GCATATTTCAAAGAGCTGATTCAAAAGAGAAAA-CGCCACC--CTCAACA 659
||.|||||.|||.|..|.|||.|||||.||||| |||..|| ||.||
BL00957___bio 586 GCTTATTTTAAAAATTTAATTGAAAAGCGAAAAGCGCATCCTTCTGAA-- 633
BSNT_04397___ 660 GGATATGATCAGCA-------TGCTCTTGAAGGGGAAAGAAAATGATAAG 702
||..||||||||| .|.|| ||||..||
BL00957___bio 634 -GACCTGATCAGCACATTCGCCGGTC----------------ATGAGCAG 666
BSNT_04397___ 703 CTGACGGAAGAGGAGGCGGCAT-CTACGTGCATATTGCTGGCGATCGCCG 751
||..|.||.||.||.| .||.| |.||||||||..||||.|.|||.||||
BL00957___bio 667 CTTGCTGATGAAGAAG-TGCTTGCGACGTGCATCCTGCTTGTGATTGCCG 715
BSNT_04397___ 752 GACATGAGACAACGGTTAATCTCATCAGCAA----TTCAGTCCTTTGTCT 797
||||||||||.||.||.||.||..|.|..|| || || |||..||
BL00957___bio 716 GACATGAGACGACAGTCAACCTTTTGACGAACGGGTT--GT--TTTTGCT 761
BSNT_04397___ 798 GCTG-CAGCATCCAGAACAGCT-TTTGAAACTGAGAGAAAATCCAGAT-C 844
..|| || |||||.||.||||| ..|| |.||||.||||||||| |.| |
BL00957___bio 762 CATGACA-CATCCTGACCAGCTCAGTG-AGCTGAAAGAAAATCC-GCTGC 808
BSNT_04397___ 845 TTATTG-GTACCGCAGTTGAGGAATGTTTACGCTATGAAAGCCCCACGCA 893
|.|||| || |.||.||.||.||||||.|.||||||||||||||.||.||
BL00957___bio 809 TGATTGAGT-CGGCCGTCGAAGAATGTCTTCGCTATGAAAGCCCGACACA 857
BSNT_04397___ 894 AATGACAGCCAGAGTTGCGTCAGAGGATATTGACATCAGCGGGGTGACGA 943
..|||||||..|....|||||.|||||....||.||||.||| ||..|
BL00957___bio 858 GCTGACAGCGCGCACCGCGTCGGAGGACTGCGAAATCAACGG---GAAAA 904
BSNT_04397___ 944 TCCGTC----AAGGAGAGCAAGTCTATCTTTTGTTAGGAGCGGCTAATCG 989
| |.|| ||||||||||..|.|||.|..|.|||||.||.||.||.||
BL00957___bio 905 T-CATCAAAAAAGGAGAGCACTTATATATCCTTTTAGGCGCCGCCAACCG 953
BSNT_04397___ 990 AGACCCTAGCATA-TTCACGAACCCCG-ATGTCTTCGATATTACGAGAAG 1037
.||.||.|..||| |||| ||.|||| ||.|.||.||.||.||.||||.
BL00957___bio 954 CGATCCAAAGATATTTCA--AAACCCGCATCTATTTGACATCACAAGAAA 1001
BSNT_04397___ 1038 TCCTAATCCGCACCTTTCATTCGG-GCATG-GCCATCATGTTTGCTTAGG 1085
.||.||||||||||||.|.||.|| ||..| || .||.||.||.|||||
BL00957___bio 1002 GCCGAATCCGCACCTTGCCTTTGGAGCCGGTGC--GCACGTATGTTTAGG 1049
BSNT_04397___ 1086 GTCCTCGCTGGCACGATTAGAAGCGCAAATTGCGATTAACAC-CTTTCTG 1134
.||..|..||||.||..|.||||||||||||||.|||..|.| ||.| ||
BL00957___bio 1050 CTCGGCATTGGCGCGGCTCGAAGCGCAAATTGCCATTCCCGCACTGT-TG 1098
BSNT_04397___ 1135 CAGCGAATGCCCAGCCTTAAGCTCGC-------------GGATTTTGAAT 1171
..|||..||||.|.|.|.|||||.|| ..||||.|.|
BL00957___bio 1099 GCGCGGCTGCCTAACTTGAAGCTTGCTTCAACAGACGTTCCATTTCGCA- 1147
BSNT_04397___ 1172 GGCGGT-ATCGGCCGCTTTTTGGATTTCGGGCGCTTGAGGAGCTGCCGGT 1220
||| | |||||| |||.||| ||||.|..||||||||.||
BL00957___bio 1148 GGC--TAATCGGC-----TTTAGAT------CGCTGGCCGAGCTGCCTGT 1184
BSNT_04397___ 1221 GACTTTTGAATAA- 1233
.| |..|.|||.|
BL00957___bio 1185 CA-TCCTCAATTAA 1197
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