Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04398 and BL00956
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:34
# Commandline: needle
# -asequence dna-align/BSNT_04398___bioB.1.5803.seq
# -bsequence dna-align/BL00956___bioB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04398___bioB-BL00956___bioB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04398___bioB-BL00956___bioB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04398___bioB
# 2: BL00956___bioB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1018
# Identity: 786/1018 (77.2%)
# Similarity: 786/1018 (77.2%)
# Gaps: 26/1018 ( 2.6%)
# Score: 3071.0
#
#
#=======================================
BSNT_04398___ 1 ATGAATCAATGGATGGAACTCGCAGACCGGGTGCTGGCTGGAGCAGAAGT 50
||||||||.|||||||||||.|||||.||.|||||||.|||.|..|||||
BL00956___bio 1 ATGAATCAGTGGATGGAACTTGCAGAACGTGTGCTGGATGGCGGGGAAGT 50
BSNT_04398___ 51 GACTGACGAAGAGGCGCTTTCAATATTACATTGTCCTGATGAAGATATTT 100
.|||||..|||||||||||||.||.||..|.||.||.|||||.||..||.
BL00956___bio 51 AACTGAAAAAGAGGCGCTTTCCATCTTGGAATGCCCGGATGACGACGTTC 100
BSNT_04398___ 101 TGCTATTAATGCATGGAGCTTTTCATATCAGAAAACACTTTTATGGAAAA 150
|.||..|.|||||||..||||||||.||||||||||.||..||.||||||
BL00956___bio 101 TTCTGCTTATGCATGCCGCTTTTCAAATCAGAAAACGCTACTACGGAAAA 150
BSNT_04398___ 151 AAAGTAAAGCTCAATATGATTATGAATGCGAAATCCGGGCTCTGCCCGGA 200
|||||||||||||||||||||||||||||.||||||||.||.||.|||||
BL00956___bio 151 AAAGTAAAGCTCAATATGATTATGAATGCAAAATCCGGCCTTTGTCCGGA 200
BSNT_04398___ 201 AAACTGCGGCTATTGTTCACAGTCTGCGATTTCGAAAGCGCCGATTGAGT 250
||||||||||||.||.||.||||||.||||.||.|||||||||||.||..
BL00956___bio 201 AAACTGCGGCTACTGCTCGCAGTCTTCGATATCAAAAGCGCCGATCGACA 250
BSNT_04398___ 251 CTTATCGGATGGTGAATAAGGAAACG---CTGCTTGAAGGCGCGAAGCGG 297
..||.||||||||..|.| ||||| .|||||||||||||.|||||.
BL00956___bio 251 GCTACCGGATGGTCGACA---AAACGACCTTGCTTGAAGGCGCAAAGCGT 297
BSNT_04398___ 298 GCGCACGATCTGAATATCGGCACATATTGTATCGTGGCAAGCGGCAGAGG 347
|||||||||.|.||||||||.|||||.||.||||||||.|||||||||||
BL00956___bio 298 GCGCACGATTTAAATATCGGAACATACTGCATCGTGGCGAGCGGCAGAGG 347
BSNT_04398___ 348 GCCGTCTAACAGAGAAGTGGATCAGGTCGTAGATGCGGTTCAGGAAATTA 397
.|||||.|||||||||||.|||||.||.||.||.||.|||.|.|||||.|
BL00956___bio 348 ACCGTCCAACAGAGAAGTCGATCAAGTGGTCGACGCCGTTAAAGAAATCA 397
BSNT_04398___ 398 AAGAGACGTATGGACTGAAGGTTTGTGCGTGTCTCGGACTGTTGAAGCCA 447
||||.|||||.||..|.||..|.||.||.||.|||||||||.|.|||||.
BL00956___bio 398 AAGAAACGTACGGTTTAAAAATCTGCGCATGCCTCGGACTGCTAAAGCCC 447
BSNT_04398___ 448 GAGCAGGCGAAGCGGCTCAAAGATGCCGGAGTAGACCGCTATAATCATAA 497
|.|||.||..|||||||.||.||.||||||||||||||.||.|||||.||
BL00956___bio 448 GGGCAAGCCGAGCGGCTGAAGGAAGCCGGAGTAGACCGGTACAATCACAA 497
BSNT_04398___ 498 TTTGAATACGTCACAGAGGAACCATTCAAACATCACGACCTCACATACAT 547
..|.|||||.|||.|.|..|||||||||||.||.||.||.||.||.||.|
BL00956___bio 498 CATCAATACATCAAAAACCAACCATTCAAATATTACAACGTCCCACACGT 547
BSNT_04398___ 548 ACGATGACAGAGTCAATACGGTTGAAATCGCAAAAGAATCGGGGCTGTCT 597
|.||||||||.||.||.||.||.||||..||.|||.||||.|||.||||.
BL00956___bio 548 ATGATGACAGGGTGAACACTGTGGAAACAGCCAAAAAATCCGGGATGTCC 597
BSNT_04398___ 598 CCGTGTTCAGGCGCCATTATCGGGATTAAGGAGACGAAACAGGATGTCAT 647
||.|||||.||||.|||..|||||||.||.||||||||.|||||||||.|
BL00956___bio 598 CCATGTTCGGGCGTCATCGTCGGGATGAAAGAGACGAAGCAGGATGTCGT 647
BSNT_04398___ 648 TGACATCGCCAAAAGCTTGAAGGCCCTTGACGCGGATTCCATTCCTGTGA 697
|||.||.||.||||||||.|||||.||.||.||.||.||.|||||.||.|
BL00956___bio 648 TGATATGGCGAAAAGCTTAAAGGCGCTGGATGCCGACTCGATTCCAGTTA 697
BSNT_04398___ 698 ATTTTTTGCATGCAATTGATGGCACGCCGTTAGAAGGCGTCAACGAATTA 747
|||||||||||||.||.||.||.||.|||.|.|||||.|||||.|||||.
BL00956___bio 698 ATTTTTTGCATGCGATCGACGGGACTCCGCTGGAAGGGGTCAATGAATTG 747
BSNT_04398___ 748 AACCCGCTGTATTGTTTAAAAGTGCTGGCGCTGTTCCGTTTTATCAATCC 797
||.|||||.|||||||||||.||..|.||..|||||||.||||||||.||
BL00956___bio 748 AATCCGCTTTATTGTTTAAAGGTTTTAGCTTTGTTCCGCTTTATCAACCC 797
BSNT_04398___ 798 ATCAAAAGAAATTCGCATTTCCGGAGGAAGAGAGGTCAATCTCCGCTCAT 847
..||||.|||||.||||||||.||.||..|.||.|||||.||||||||.|
BL00956___bio 798 GACAAAGGAAATCCGCATTTCAGGGGGGCGCGAAGTCAACCTCCGCTCCT 847
BSNT_04398___ 848 TGCAGCCATTAGGGCTTTACGCCGCAAACTCCATTTTTGTCGGAGACTAC 897
|||||||.||.|||||.||.|||||.||.||.||.||.|||||||||||.
BL00956___bio 848 TGCAGCCGTTGGGGCTGTATGCCGCCAATTCAATCTTCGTCGGAGACTAT 897
BSNT_04398___ 898 TTAACAACTGCCGGGCAAGAGGAGACGGAGGATCATAAAATGCTGAGTGA 947
|||||.||.||.||.||..|.||.||.|||||.|||||.|||||...|||
BL00956___bio 898 TTAACGACGGCAGGACAGAATGAAACAGAGGACCATAAGATGCTTCATGA 947
BSNT_04398___ 948 TTTAGGCTTTGAAGTTGAATCAGTCGAAGAAATGAAGGCCAGTTTA---- 993
||||||.||.|||||.|||||.||||||||||||||.|||||||||
BL00956___bio 948 TTTAGGGTTCGAAGTCGAATCGGTCGAAGAAATGAAAGCCAGTTTACAGC 997
BSNT_04398___ 994 ---AGTGCGAAAAGCTGA 1008
||
BL00956___bio 998 GGTAG------------- 1002
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