Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04401 and BL00954
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:34
# Commandline: needle
# -asequence dna-align/BSNT_04401.1.5803.seq
# -bsequence dna-align/BL00954___bioF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04401-BL00954___bioF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04401-BL00954___bioF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04401
# 2: BL00954___bioF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1177
# Identity: 763/1177 (64.8%)
# Similarity: 763/1177 (64.8%)
# Gaps: 173/1177 (14.7%)
# Score: 2411.0
#
#
#=======================================
BSNT_04401 1 ----------ATGAATGGGGCA----CCGGTTC-CGGAGAGGAA------ 29
|.||||||..|| ||||.|| |..|||.|||
BL00954___bio 1 GTGCGTATTGACGAATGGCTCAGCAGCCGGCTCGCAAAGACGAAAGCAGC 50
BSNT_04401 30 ----CATT---GATGGCGAAAA-----TCAA---------ACGGTCTGGT 58
|.|| |.|.||..||| |||| |||...|||.
BL00954___bio 51 CGGGCTTTACCGCTCGCTTAAACTGCCTCAAGCTGAACGTACGAATTGGG 100
BSNT_04401 59 CCTCAAACAATTATTTAGGGCTCGCAAGCGATAGACGTTTGATCGATGCA 108
|.||||||.|||||||.||.||.||.|.|||.|.|||..||||..||||.
BL00954___bio 101 CGTCAAACGATTATTTGGGCCTGGCGAACGACAAACGGCTGATTCATGCC 150
BSNT_04401 109 GCCCAAACAGCATT--GCAGCAATTTGGGACAGGAAGTAGCGGTTCACGT 156
||..|||||||..| ||.|| |||||..|.|||||.|..||.|||.|.
BL00954___bio 151 GCAGAAACAGCGCTCCGCCGC--TTTGGAGCCGGAAGCACAGGATCAAGG 198
BSNT_04401 157 TTAACGACAGGCAATTCGGTCTGGCATGAAAAGCTAGAAAAGAAGATTGC 206
.|.|||.||||||||.|.|..|||||||||||.||.||...|||.||.||
BL00954___bio 199 CTGACGTCAGGCAATACCGCATGGCATGAAAAACTTGAGCGGAAAATCGC 248
BSNT_04401 207 CAGCTTTAAGCGGACAGAAGCGGCCCTGCTGTTTTCGAGCGGTTACTTGG 256
|.|.|||||||.|||.||||||||.||..|||||||.|||||.||.||||
BL00954___bio 249 CGGTTTTAAGCAGACGGAAGCGGCTCTCTTGTTTTCAAGCGGATATTTGG 298
BSNT_04401 257 CCAATGTCGGTGTCCTTTCATCCTTGCCAGAAAAGGAAGATGTCATTTTA 306
||||||||||.||.|||||.||.|||||.|||||.|.|||.|||||.|||
BL00954___bio 299 CCAATGTCGGCGTGCTTTCGTCTTTGCCTGAAAAAGGAGACGTCATATTA 348
BSNT_04401 307 AGTGACCAGCTCAATCATGCAAGTATTATCGACGGCTGCCGACTTTCTAA 356
||.||.||..|.||.||.||.||.||.||||||||||||||.|||||.||
BL00954___bio 349 AGCGATCAATTGAACCACGCCAGCATCATCGACGGCTGCCGCCTTTCAAA 398
BSNT_04401 357 GGCTGATACAGTTGTTTATCGGCATATTGATATGAATGATCTTGAAAACA 406
.||||||||.||||||||.||.||.|..||||||||||||||||||.|.|
BL00954___bio 399 AGCTGATACGGTTGTTTACCGCCACAAGGATATGAATGATCTTGAAGAAA 448
BSNT_04401 407 AGCT-------GAATGAAACACAG---CGTTATCAGCGCCGTTTTATCGT 446
|||| | ||||| ||| .|| |||||.|||||.||
BL00954___bio 449 AGCTCCGCGCCG-------CACAGAGCCGT--GCA-CGCCGCTTTATTGT 488
BSNT_04401 447 AACAGACGGGGTATTCAGCATGGATGGCACAATCGTCCCTCTTGATCAGA 496
.||||||||.||.|||||||||||.|||||.||.|..||.|||||..|.|
BL00954___bio 489 GACAGACGGCGTGTTCAGCATGGACGGCACGATTGCGCCGCTTGACGAAA 538
BSNT_04401 497 TCAT-CTCACTTGCGAAACGCTATCATGCCTTCGTGGTCGTTGATGACGC 545
|||| || .||.||.||.|..||.|..|||||.||..||||.|||||.||
BL00954___bio 539 TCATGCT-GCTCGCCAAGCAGTACCGGGCCTTTGTTATCGTAGATGATGC 587
BSNT_04401 546 CCACGCAACAGGAGTTTTAGGTGATTCGGGACGAGGAACGAGTGAATACT 595
|||.||||||||.|||||.||.||..|.||..|.||||||||.||.||.|
BL00954___bio 588 CCATGCAACAGGGGTTTTGGGAGAAGCCGGCAGGGGAACGAGCGAGTATT 637
BSNT_04401 596 TTGGTGTTTATCCTGACATTGTGATCGGCACCTTAAGCAAAGCTGTTGGT 645
|.||.||.|.|||.||..||||||||||.||.|||||.||||||||.||.
BL00954___bio 638 TCGGCGTCTCTCCCGATGTTGTGATCGGTACGTTAAGTAAAGCTGTAGGC 687
BSNT_04401 646 ACGGAAGGAGGTTTTGCGGCTGGATC---AGCGGTCTTCATCGACTTTTT 692
.|.|||||.||.||.|..||.||.|| |.| .||.|||||.|||||
BL00954___bio 688 GCAGAAGGCGGCTTCGTCGCAGGTTCTAAAAC---ATTGATCGATTTTTT 734
BSNT_04401 693 GCTGAACCATGCCAGAACATTTATCTTTCAAACCGCTATTCCGCCAGCCA 742
||||||.|||||.|||||.||||||||||||||.|||.|.|||||.||.|
BL00954___bio 735 GCTGAATCATGCGAGAACGTTTATCTTTCAAACAGCTGTCCCGCCCGCAA 784
BSNT_04401 743 GCTGTGCGGCTGC-----------------TCA-CGA------------- 761
||||||||||.|| ||| |||
BL00954___bio 785 GCTGTGCGGCGGCATGCAAAGCTTTAGATATCATCGAAGACAGCCGGGCT 834
BSNT_04401 762 -------GGCTTT--CAA-CATCAG------------AAC-CAGTTTGAA 788
|||||| ||| ||||.| ||| .|||.|...
BL00954___bio 835 AAACGCCGGCTTTTGCAATCATCGGTGAACACGATCAAACGGAGTCTCGT 884
BSNT_04401 789 GAATAT-GGGTTATGTGGTGAAAGGAGATCACACACCGATTATTCCTGTA 837
|.|||| ||||| |..|||.||.|||||..|.||.|||||.||.||.||.
BL00954___bio 885 GGATATCGGGTT-TACGGTCAACGGAGAAGATACGCCGATCATACCCGTT 933
BSNT_04401 838 GTCATTGGCGATGCCCATAAAAC-GGTCATATTTGCTGAAAAA----CTG 882
.|.||.||.|||.||||.|||.| |.||| |||||| ||| |||
BL00954___bio 934 ATGATCGGAGATCCCCAAAAAGCTGTTCA-ATTTGC----AAACGGCCTG 978
BSNT_04401 883 CAGGGCAAGGGAATTTATGCTCCTGCCATTCGGCCGCCGACCGTTGCGCC 932
.|||..|||||.|||.|.||.||.|||||.||.||||||||.|||||...
BL00954___bio 979 AAGGAGAAGGGGATTGAAGCCCCGGCCATCCGACCGCCGACTGTTGCAGA 1028
BSNT_04401 933 GGGTGAAAGCCGTATTCGAATTACAATCACGTCTGACCACAGTATG--GG 980
.||.||.|||||.||..|..|.|| |||| |||.|||.|.| ||
BL00954___bio 1029 AGGAGAGAGCCGGATCAGGCTGAC-----CGTC--ACCGCAGAACGCAGG 1071
BSNT_04401 981 T-----GATATTGATGATTTGCTGAAAACA----TTTCATTCAATCGGAA 1021
| ||||||||.|||.| |..|.| |||.|.|.|||.||||
BL00954___bio 1072 TTGAAAGATATTGAAGATCT----ATTAGAGGGGTTTAAATTAATGGGAA 1117
BSNT_04401 1022 AGGAGCTGCATATCATT--TGA----- 1041
..|||.||.| .|| |||
BL00954___bio 1118 GAGAGTTGAA----CTTGGTGAAATGA 1140
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