Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04402 and BL00953
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:34
# Commandline: needle
# -asequence dna-align/BSNT_04402___bioA.1.5803.seq
# -bsequence dna-align/BL00953___bioA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04402___bioA-BL00953___bioA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04402___bioA-BL00953___bioA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04402___bioA
# 2: BL00953___bioA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1356
# Identity: 1034/1356 (76.3%)
# Similarity: 1034/1356 (76.3%)
# Gaps: 18/1356 ( 1.3%)
# Score: 3802.5
#
#
#=======================================
BSNT_04402___ 1 ATGACTC-ATGATTTGATAGAAAAAAGTAAAAAGCACCTCTGGCTGCCAT 49
||||.|| ||.|||.| |.||.|||||.|||.|..|.||.||||||||.|
BL00953___bio 1 ATGAATCAATCATTCG-TTGAGAAAAGCAAACAATATCTTTGGCTGCCTT 49
BSNT_04402___ 50 TTACCCAAATGAAAGATTATGATGAAAACCCCTTAATCATCGAAAGCGGG 99
||||||||||||||||.|||||.||||||||..|.|||||||||||||||
BL00953___bio 50 TTACCCAAATGAAAGACTATGACGAAAACCCGCTGATCATCGAAAGCGGG 99
BSNT_04402___ 100 ACTGGAATCAAAGTCCAAGACATAAATGGCAAGGAATACTATGACGGTTT 149
...||||||||..|..||||.||..|.||.|.||..|||||.|||||.||
BL00953___bio 100 CAGGGAATCAAGCTGAAAGATATCGACGGGAGGGTGTACTACGACGGATT 149
BSNT_04402___ 150 TTCATCAGTTTGGCTTAATGTCCACGGACACCGCAAAAAAGAACTAGATA 199
|||.|||||.|||||.||||||||.||.||.|||||.||.|||||.|||.
BL00953___bio 150 TTCTTCAGTATGGCTCAATGTCCATGGCCATCGCAAGAAGGAACTGGATG 199
BSNT_04402___ 200 ACGCCATAAAAAAACAGCTCGGAAAAATTGCGCACTCCACGTTGTTGGGC 249
|.|||||.||||||||||||||.|||||.||.||.||.||.|||.||||.
BL00953___bio 200 AGGCCATCAAAAAACAGCTCGGCAAAATCGCTCATTCGACATTGCTGGGA 249
BSNT_04402___ 250 ATGACCAACGTTCCAGCAACCCAGCTTGCCGAGACATTAATCGACATCAG 299
|||||.||.|||||.||.||..|.|||||||||...||||||.|.||||.
BL00953___bio 250 ATGACAAATGTTCCGGCGACAGAACTTGCCGAGGTGTTAATCAAGATCAC 299
BSNT_04402___ 300 CCCAAAAAAGCTCACGCGGGTCTTTTATTCAGACAGCGGTGCAGAAGCGA 349
.||..||||.||.|||||.||.||||||||.||||||||.||...|||.|
BL00953___bio 300 GCCGGAAAATCTGACGCGTGTTTTTTATTCGGACAGCGGCGCCACAGCAA 349
BSNT_04402___ 350 TGGAAATAGCCTTAAAAATGGCGTTTCAGTATTGGAAGAACATTGGGAAG 399
|||||||.||..|.||.|||||.|||||.||||||||.|||||.||.|||
BL00953___bio 350 TGGAAATCGCGCTGAAGATGGCCTTTCAATATTGGAAAAACATCGGCAAG 399
BSNT_04402___ 400 CCCGAGAAACAAAAATTTATCGCTATGAAAAACGGGTATCACGGTGATAC 449
||.||||||||||||||.||..|.|||||||||||.||||||||.|||||
BL00953___bio 400 CCGGAGAAACAAAAATTCATTTCGATGAAAAACGGCTATCACGGCGATAC 449
BSNT_04402___ 450 GATTGGCGCCGTCAGTGTCGGTTCAATTGAGCTTTTTCACCACGTATACG 499
|||.|||||.|||||.||||||.||||.|||||.||.|||||.|||||||
BL00953___bio 450 GATCGGCGCTGTCAGCGTCGGTGCAATCGAGCTCTTCCACCATGTATACG 499
BSNT_04402___ 500 GCCCGTTGATGTTCGAGAGTTACAAGG-CACCGATTCCTTATGTGTATCG 548
|.|||.|.|||||.||.||.|..|||| .|.|| ||||.||.||.||.||
BL00953___bio 500 GGCCGCTTATGTTTGAAAGCTTTAAGGTGAACG-TTCCATACGTATACCG 548
BSNT_04402___ 549 CTCTGAAAGCGGTGATCCTGATGAGTGCTGTGATCAGTGCCTCCGAGAGC 598
|||..|||||||..|.||.||.||||||.|.|||.|.||.|||..|||.|
BL00953___bio 549 CTCGAAAAGCGGCAACCCGGACGAGTGCCGCGATGAATGTCTCGCAGAAC 598
BSNT_04402___ 599 TTGAACAGCTGCTTAAAGAACATCACGAGGAAATTGCCGCGCTTTCCATT 648
|.||||.|||.||.|..||.|..|||||.||.||.||||||||.||..|.
BL00953___bio 599 TCGAACGGCTCCTGAGCGAGCGGCACGATGAGATCGCCGCGCTGTCGGTC 648
BSNT_04402___ 649 GAATCAATAGTACAAGGCGCGTCCGGTATGATCGTGATGCCGGAAGGATA 698
|||||.||.||.|||||.||.||.||.||||||||||||||.||||||||
BL00953___bio 649 GAATCGATGGTTCAAGGGGCATCAGGGATGATCGTGATGCCTGAAGGATA 698
BSNT_04402___ 699 TTTGGCAGGGGTGCGCGAGCTATGTACAACATACGATGTCTTAATGATCG 748
|||||||||.||.||.|||||.||.||.|.|||.||.||.||||||||.|
BL00953___bio 699 TTTGGCAGGCGTCCGGGAGCTCTGCACGAAATATGACGTTTTAATGATTG 748
BSNT_04402___ 749 TTGATGAAGTCGCTACAGGCTTTGGCCGTACAGGAAAAATGTTTGCGTGC 798
|.||||||||.||.|||||.||.|||||.||.||.|||||||||||.||.
BL00953___bio 749 TCGATGAAGTGGCGACAGGGTTCGGCCGAACCGGGAAAATGTTTGCCTGT 798
BSNT_04402___ 799 GAGCACGAGAATGTCCAGCCTGATCTGATGGCTGCCGGTAAAGG-CATTA 847
|||||.||...|||.||.|||||..|||||||.||.|| ||||| |||||
BL00953___bio 799 GAGCATGAACGTGTTCAACCTGACTTGATGGCGGCTGG-AAAGGCCATTA 847
BSNT_04402___ 848 CAGGAGGCTATTTGCCAATTGCCGTTACGTTTGCCACTGAAGACATCTAT 897
|.||||||||||||||.||.|||||.||||||||.||.||.||.||.|||
BL00953___bio 848 CCGGAGGCTATTTGCCGATCGCCGTAACGTTTGCGACAGAGGAAATTTAT 897
BSNT_04402___ 898 AAGGCATTCTATGATGATTATGAAAACCTAAAAACCTTTTTCCATGGCCA 947
.||||.|||||||||||.||..|.||.||.|||||.||||||||.|||||
BL00953___bio 898 GAGGCGTTCTATGATGACTACAACAAACTCAAAACGTTTTTCCACGGCCA 947
BSNT_04402___ 948 TTCCTATACAGGCAATCAGCTTGGCTGTGCGGTTGCGCTTGAAAATCTG- 996
.||.||.||.||.||.||||||||.|||||.||||||||.||||||.||
BL00953___bio 948 CTCATACACGGGGAACCAGCTTGGTTGTGCCGTTGCGCTGGAAAATTTGC 997
BSNT_04402___ 997 GCATTATTTGAATCTGAAAACATTGTGGAACAAGTAGCGGAAAAAAGT-- 1044
|| .|.||.|||||.|||||.||.||.|..|||||.|||| ||||||
BL00953___bio 998 GC-CTGTTCGAATCGGAAAAAATCGTCGCTCAAGTTGCGG--AAAAGTCG 1044
BSNT_04402___ 1045 AAAAAGCTCCATTTTCTTCTTCAAGATCT-GCA-CGCTCTTCCTCATGTT 1092
||||..||..|.|..||..||||.||||| ||| ||||| ||||||||.
BL00953___bio 1045 AAAATACTGGAATCGCTCTTTCATGATCTGGCAGCGCTC--CCTCATGTC 1092
BSNT_04402___ 1093 GGGGATATTCGGCAGCTTGGCTTTATGTGCGGTGCAGAGCTTGTCCGGTC 1142
||.||.||.||.|||||.||.||||||.||||....|||||.||.|.|||
BL00953___bio 1093 GGCGACATCCGCCAGCTCGGTTTTATGAGCGGGATCGAGCTCGTTCAGTC 1142
BSNT_04402___ 1143 AAAGGAAACCAAAGAACCTTACCCGGCTGATCGGCGGATTGGATACAAAG 1192
.||||||||.|...|.|||||.|||.|.||...|||.||.||||||...|
BL00953___bio 1143 GAAGGAAACGAGGCAGCCTTATCCGCCCGAAGAGCGAATCGGATACCGGG 1192
BSNT_04402___ 1193 TTTCCTTAAAAATGAGAGAGTTAGGAATGCTGACAAGACCGCTTGGGGAC 1242
|.||.||.||||||||||||.|.||.||||||||.||.|||||.|||||.
BL00953___bio 1193 TGTCTTTGAAAATGAGAGAGCTTGGCATGCTGACGAGGCCGCTCGGGGAT 1242
BSNT_04402___ 1243 GTGATTGCATTTCTGCCTCCTCTCGCCAGCACAGCTGAAGAGCTCACG-G 1291
||..|.||||||||.|||||.|||||||||||.||.||.||.|| .|| |
BL00953___bio 1243 GTTGTCGCATTTCTTCCTCCGCTCGCCAGCACCGCCGATGACCT-GCGCG 1291
BSNT_04402___ 1292 AAATGGTTGCCATTATGAAACAAGCGATCCACGAGGTTACGAGCCTTGAA 1341
..|||||..|.|||||||||.|||||||.||.||||||||..|||.||..
BL00953___bio 1292 CCATGGTGTCGATTATGAAAGAAGCGATTCAAGAGGTTACAGGCCGTGCG 1341
BSNT_04402___ 1342 GATTGA 1347
.|||||
BL00953___bio 1342 TATTGA 1347
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