Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05911 and BL00939
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence dna-align/BSNT_05911.1.5803.seq
# -bsequence dna-align/BL00939___katX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05911-BL00939___katX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05911-BL00939___katX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05911
# 2: BL00939___katX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1659
# Identity: 883/1659 (53.2%)
# Similarity: 883/1659 (53.2%)
# Gaps: 546/1659 (32.9%)
# Score: 3080.5
#
#
#=======================================
BSNT_05911 0 -------------------------------------------------- 0
BL00939___kat 1 ATGGATCAGCATTCAAACGAGCAGAAATCTGACATGGAGACTGATGATAC 50
BSNT_05911 0 -------------------------------------------------- 0
BL00939___kat 51 GTTAACAAACCGGCAGGGCCACCCGATCACAAACAATCAGAATATCAGAA 100
BSNT_05911 0 -------------------------------------------------- 0
BL00939___kat 101 CCGTGGGCAACCGGGGGCCATCAACATTGGAGAACTATGATTTCCTGGAG 150
BSNT_05911 0 -------------------------------------------------- 0
BL00939___kat 151 AAGATCAGCCACTTTGACAGGGAGAGGGTTCCAGAGCGGGTCGTCCATGC 200
BSNT_05911 0 -------------------------------------------------- 0
BL00939___kat 201 CAGGGGAGCCGGAGCGCACGGCTATTTTGAAGCTTATGGGACAGCAGGCG 250
BSNT_05911 0 -------------------------------------------------- 0
BL00939___kat 251 ATGAGCCGGTCTCAAAGTATACGAGAGCAAAGCTTTTTCAGGAAAAAGGC 300
BSNT_05911 0 -------------------------------------------------- 0
BL00939___kat 301 AAGAGAACCCCGGTGTTTGTCCGTTTTTCGACGGTGACTCACGGGATATC 350
BSNT_05911 0 -------------------------------------------------- 0
BL00939___kat 351 CTCACCGGAAACGCTGCGGGATCCCCGCGGATTTGCGGTCAAGTTCTACA 400
BSNT_05911 1 --------------------TTGGTCGGAAACAACCTGAAAATCTTTTTT 30
.||||||||||||||.||||.|||||.|||
BL00939___kat 401 CTGAAGACGGTAACTGGGATCTGGTCGGAAACAACTTGAAGATCTTCTTT 450
BSNT_05911 31 ATCCGCGACCCGCTGAAATTTCCGGATCTTGTACACGCATTTCAGCCTGA 80
||||||||..||.|.||.|||||||||.|..|.||.||||||.||||.||
BL00939___kat 451 ATCCGCGATGCGGTAAAGTTTCCGGATTTAATCCATGCATTTAAGCCGGA 500
BSNT_05911 81 TCCAGTGACAAACATCCAGGATGGTGAACGTATCTTCGATTTCATTTCTC 130
.||.||.||.||..|.||||||||.|||.|.|||||.||.|||||||| |
BL00939___kat 501 CCCGGTTACGAATTTGCAGGATGGCGAAAGAATCTTTGACTTCATTTC-C 549
BSNT_05911 131 AA-TCTCCTGAAGCGACACACATGATCACCTTCTTGTTTTCGCCTTGGGG 179
|| .|.||||||||||..||.||||||||.||.|||||||||||||||||
BL00939___kat 550 AACACGCCTGAAGCGATGCATATGATCACATTTTTGTTTTCGCCTTGGGG 599
BSNT_05911 180 CATTCCGGCCAACTACCGGCAAATGCAGGGTTCAGGCGT--ACATGCCTA 227
.||||||||.|||||||||||.||||||||.||.||.|| ||| |.||
BL00939___kat 600 TATTCCGGCGAACTACCGGCAGATGCAGGGGTCCGGGGTGAACA--CGTA 647
BSNT_05911 228 TAAATGGGTGAAT-GAGGAGGGCAAGGCCGTTCTCGTGAAATACCATTTT 276
.|||||||||||| .||.||||.|| |||||.||.||||||||.||.|..
BL00939___kat 648 CAAATGGGTGAATCAAGAAGGGGAA-GCCGTGCTTGTGAAATATCACTGG 696
BSNT_05911 277 GAACCGAAGCAGGGCATCCGCAACCTGACACAGAAGGAAGCAGAAGAGAT 326
|||||||||||||||||....|||.||||.||.||.||.||.|||||.||
BL00939___kat 697 GAACCGAAGCAGGGCATAAAAAACTTGACGCAAAAAGAGGCGGAAGAAAT 746
BSNT_05911 327 TCAAGGGAAAAACTTTAACCATGCCACACAGGATTTATATGACGCGATTG 376
|||.|.|||.||.||.||.||.||||||||||||||||||||.|||||||
BL00939___kat 747 TCAGGCGAAGAATTTCAATCACGCCACACAGGATTTATATGAAGCGATTG 796
BSNT_05911 377 AAAATGGCGATTATCCAGAGTGGGAAGTGTATGCACAAATCATGAGCGAT 426
|....||.||||||||.||||||||..|||..|..|||||||||||||||
BL00939___kat 797 AGCGCGGAGATTATCCCGAGTGGGAGCTGTTCGTTCAAATCATGAGCGAT 846
BSNT_05911 427 GATGAGCATCCTGAACTGGACTTTGATCCTCTTGATCCGACA--AAACTG 474
||||||||||||||.||.||.|||||.||.||||| ||||| ||.|||
BL00939___kat 847 GATGAGCATCCTGAGCTCGATTTTGACCCGCTTGA--CGACACGAAGCTG 894
BSNT_05911 475 TGGTATAAAGACGATTTTCCATGGAAACCGATCGGCAAATTGGTTCTGAA 524
|||..|.||||..|.|||||.|||...||..||||||||.|||||.|.||
BL00939___kat 895 TGGCCTGAAGATCAATTTCCTTGGCTGCCTGTCGGCAAAATGGTTTTAAA 944
BSNT_05911 525 CAAAAATCCGGAAAACTACCATGCGGAAGTGGAGCAAGCTTCATTTGGAA 574
|||||||||||||.|||||..|.|.|||||.||.|||||..|||||||||
BL00939___kat 945 CAAAAATCCGGAAGACTACTTTACAGAAGTCGAACAAGCGGCATTTGGAA 994
BSNT_05911 575 CGGGGGTGCTTGTCGACGGGCTTGATTTTTCAGACGACAAATTGCTCCAG 624
|.|||||.|||||||||||.|||||.|||||.||.||||||.||||.|||
BL00939___kat 995 CAGGGGTTCTTGTCGACGGACTTGACTTTTCCGATGACAAAATGCTTCAG 1044
BSNT_05911 625 GGGCGTACGTTTGCCTACTCTGATACGCAGCGCTACCGTGTAGGCGCAAA 674
||.|||||.|||.|||||||.|||||.|||||||||.|.||.||.||.||
BL00939___kat 1045 GGACGTACTTTTTCCTACTCGGATACACAGCGCTACAGAGTGGGAGCCAA 1094
BSNT_05911 675 TTACCTGCAGCTTCCGATCAACTCGCCGAAAAAGCATGTCGCCACCAACC 724
.||.||||||||.||||||||..||||||||||....||.||.|||||.|
BL00939___kat 1095 CTATCTGCAGCTGCCGATCAATGCGCCGAAAAAAAGGGTGGCAACCAATC 1144
BSNT_05911 725 AGGAAGGCGGGCAGATGCAATATCGGGTCGA--TAGAGCAGAAGGA-CAA 771
||...|||||.||||||||.||...|||||| ||| |||.|| | |||
BL00939___kat 1145 AGCGGGGCGGCCAGATGCAGTACAAGGTCGATTTAG-GCAAAA--ATCAA 1191
BSNT_05911 772 AACCCGCACGTCAACTATGAGCCATCCATTATGGGCGGGCTGAAGGAAGC 821
|.|||||||.||||||||||.||.||.|..||...|||||||||.|||||
BL00939___kat 1192 AGCCCGCACATCAACTATGAACCTTCAACCATCAACGGGCTGAAAGAAGC 1241
BSNT_05911 822 GAAGCAGGACGGAAAAGACCATACGCCGCATGTCGAAGGTGATGTAAA-- 869
.||||||||.||.|||||..|.||.||||||||.||||| |||
BL00939___kat 1242 AAAGCAGGATGGCAAAGAATACACCCCGCATGTGGAAGG------AAACC 1285
BSNT_05911 870 ----GCGTGAAGCGATTGACAGAACA-AACAACTTCGGACAGGCTGGAGA 914
|||.|||...||.||||| .|| ||.||.|||...|||||.||.||
BL00939___kat 1286 TTGTGCGCGAAAGTATCGACAG-GCAGAATAATTTCAAGCAGGCCGGGGA 1334
BSNT_05911 915 AACGTACCGGAGATTT-----ACTGAATTTGAGCGGA-----ACGAATTG 954
.||.|||.|| .|||| |||| ||| ||||..||
BL00939___kat 1335 CACTTACAGG-CATTTCGAAGACTG---------GGAAAAGGACGAGCTG 1374
BSNT_05911 955 ATTACGAATTTGGTGAATACGCTTTCTACGTGCCGAAAAGAAATTCAGGA 1004
|||||||||.||||.|||||.|||.|..||||| ||
BL00939___kat 1375 ATTACGAATCTGGTCAATACACTTGCCCCGTGC---------------GA 1409
BSNT_05911 1005 TCAAATGATTGAGAATTTCACAA---AAGCTGATC------CTGA----- 1040
.||| |||||| ||| |||.||||| ||||
BL00939___kat 1410 CCAA-------AGAATT---CAAACGAAGATGATCGATATGCTGAAGCAA 1449
BSNT_05911 1041 --CTAC--GGAAAACGTGTAGCA--------GAAGGGCTAAAAAAGGTTT 1078
|.|| ||||.|.| |.|||| |||||..|||||||.|..|
BL00939___kat 1450 TGCGACAAGGAATATG-GAAGCAGAGTCGAGGAAGGATTAAAAAACGCCT 1498
BSNT_05911 1079 CC-----GAAAACA-ACAGCAACGG--GCCGATCGGCACAACTGAA---A 1117
|| .||.||| .|||| ||| ||||||||| |.|.||| .
BL00939___kat 1499 CCAGCCAAAATACATCCAGC--CGGGAGCCGATCGG---AGCAGAAGGCG 1543
BSNT_05911 1118 CGGAACAGGCTGCAAAGCAGGCTGAACAGGAGAGCCATCCATCT---GAT 1164
|.|||.|.||..|.|..|||||.|||.|..|..|.|| .||| ||.
BL00939___kat 1544 CCGAAGATGCCCCGAGACAGGCGGAAGAAAAAGGGCA---CTCTCAAGAC 1590
BSNT_05911 1165 CCGTATTAA 1173
|||||||||
BL00939___kat 1591 CCGTATTAA 1599
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