Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03505 and BL00922
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence dna-align/BSNT_03505___mleA.1.5803.seq
# -bsequence dna-align/BL00922___mleA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03505___mleA-BL00922___mleA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03505___mleA-BL00922___mleA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03505___mleA
# 2: BL00922___mleA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1383
# Identity: 973/1383 (70.4%)
# Similarity: 973/1383 (70.4%)
# Gaps: 114/1383 ( 8.2%)
# Score: 3352.5
#
#
#=======================================
BSNT_03505___ 1 ATG-ATAGCGAAAC-ACATGATTCGGACACTGATGATCGAAACGCCTTCG 48
||| ||.|| ||| |.||.|||||||...|||||.|.||||..|||||.
BL00922___mle 1 ATGAATGGC--AACAATATTATTCGGAATTTGATGCTGGAAATCCCTTCA 48
BSNT_03505___ 49 GTTCCCGGAAATCTTGGAAGGGTGGCTACGGCAATCGGCCTTCTGGGCGG 98
|..||||||||.|||||||.||||.|.|||||.|||||||||...|||||
BL00922___mle 49 GCACCCGGAAACCTTGGAAAGGTGACAACGGCGATCGGCCTTGCCGGCGG 98
BSNT_03505___ 99 AGATATTGGTGAAGTGGAGACGGTAAAGGTCGGACCCAATTACACAATGC 148
.|||||.||.||..|.||.|||.|.|||||.||.||.|||||.||.||||
BL00922___mle 99 TGATATCGGAGAGATTGAAACGATCAAGGTAGGGCCGAATTATACGATGC 148
BSNT_03505___ 149 GGAATATTACCGTTCAAGTGGAGAATGAAGAACAGC---------TTCAG 189
||||.|||||.||||||||.|||.|||||||||||| |||..
BL00922___mle 149 GGAACATTACGGTTCAAGTTGAGCATGAAGAACAGCTCACCGAGATTCTT 198
BSNT_03505___ 190 GAAGTGAT-CGCGGCTGTACAGGCCCTCGGAGAAGGGATCAGGCTTCACA 238
|||||||| |||..|| ||.| ||||||.|||...|||||.|
BL00922___mle 199 GAAGTGATCCGCAACT-TAAA---------AGAAGGCATCCATCTTCATA 238
BSNT_03505___ 239 CCGTATCTGATGAAGTCCTGTCCGCACATGAAGGCGGAAAAATCCAAATG 288
||||.||.|||||.||.|||.|.||||||||||||||.|||||||..|||
BL00922___mle 239 CCGTTTCAGATGACGTGCTGGCTGCACATGAAGGCGGCAAAATCCGCATG 288
BSNT_03505___ 289 AAAAGCAAAATGCCGATCCGTTCACTGGCAGAGCTGGGACGTGTCTACAC 338
||||||||.||||||||.||.||.||.||.||.|||.|.||.||.||.||
BL00922___mle 289 AAAAGCAAGATGCCGATTCGCTCGCTTGCTGATCTGCGTCGGGTGTATAC 338
BSNT_03505___ 339 ACCAGGTGTTGCGGACGTGTGCCGA-CTGATCGAAAAAGAACCTGAAAAA 387
.||.|||||.|||.||||||| ||| ||.||..||.||||.||..|||||
BL00922___mle 339 GCCGGGTGTCGCGAACGTGTG-CGAGCTCATTAAAGAAGAGCCGCAAAAA 387
BSNT_03505___ 388 GCTTCTATTTATACAACG--ATCAGCAATTCTGTTGCAATTGTAACGGAT 435
||...||||||||| || |||.|||||||.|||||||||||||||||.
BL00922___mle 388 GCGAATATTTATAC--CGGAATCGGCAATTCGGTTGCAATTGTAACGGAC 435
BSNT_03505___ 436 GGAACTGCAATTTTAGGCCTTGGGA-ATATCGGCTCTGTGGCTGGCATGC 484
||.||.||.||..|.|| ||||||| |.||.||..|.||.|||||.||||
BL00922___mle 436 GGCACGGCCATCCTTGG-CTTGGGAGACATAGGGCCAGTTGCTGGAATGC 484
BSNT_03505___ 485 CTGTCATGGAAGGAAAGGCTGCTTTATTTGATCAGCTGGCGGGCATTAGC 534
||||.||||||||.||.||.|||.|.||.||.|||||.||||..||.|||
BL00922___mle 485 CTGTTATGGAAGGGAAAGCCGCTCTTTTCGACCAGCTTGCGGATATCAGC 534
BSNT_03505___ 535 GGCATTCCGATACTGCTTGATACGAGTGATCCTGAAGAAATCATCAAAAC 584
||..|||||||.|||||.||.||||.|||||||||.||||||.|.|..||
BL00922___mle 535 GGGGTTCCGATTCTGCTCGACACGAATGATCCTGATGAAATCGTAAGGAC 584
BSNT_03505___ 585 AGTAAAACATATTTCTCCGGGCTTTAGCGGCATCCTTCTTGAGGATATCG 634
.||.|||.|.||..|.||.||||||||||||||..|.|||||.||.||||
BL00922___mle 585 GGTTAAAAACATCGCGCCCGGCTTTAGCGGCATTTTGCTTGAAGACATCG 634
BSNT_03505___ 635 GTTCGCCGCATTGTTTTGAAATCGAGGATCGCCTAAAAGAGGAGCTGAAC 684
||||.|||||||||||||||||.||.||.|||||.|||.|.||.|||||.
BL00922___mle 635 GTTCACCGCATTGTTTTGAAATTGAAGAGCGCCTGAAAAACGACCTGAAT 684
BSNT_03505___ 685 ATCCCTGTTATGCACGATGACCAGCATGGTACAGCTGTAGTGACGCTGGC 734
||.||.||.|||||.||.||||||||.|||||.||.||.|||||||||||
BL00922___mle 685 ATTCCGGTCATGCATGACGACCAGCACGGTACGGCGGTTGTGACGCTGGC 734
BSNT_03505___ 735 AGCTGCCATTTCGGCATGCAGGAGTGCGGGAGTTGACCTGAAAGAAGCGA 784
.||.||||||||.|||..||.||||||.||.||.||.|||||..|.||..
BL00922___mle 735 GGCCGCCATTTCAGCAGCCAAGAGTGCAGGGGTGGATCTGAAGCAGGCCC 784
BSNT_03505___ 785 AAGTGGGGCAAATCGGCCTTGGCGCAGCAGGCGTGGCCATCTGCCGGATG 834
|.||.||.|||||||||||.|||||.||.||.||.||.||||||.|||||
BL00922___mle 785 ATGTCGGCCAAATCGGCCTGGGCGCGGCGGGTGTCGCGATCTGCAGGATG 834
BSNT_03505___ 835 TTCATGGCTTATGGTGTGAA---TGCTGTGTACGGCACAGACAAATC--- 878
||.|||||.|||||.||.|| ||.||| |||.||.||.|||||
BL00922___mle 835 TTTATGGCATATGGAGTAAAACGTGTTGT---CGGAACGGATAAATCGCT 881
BSNT_03505___ 879 AGAGTCAGCAATGAACCGTCTCGAACAATACGGCGGACAGGCAGTTTCCA 928
.||| ||.|||...|||.|.||..|.||.|||||.||.||.|.|...|
BL00922___mle 882 TGAG---GCGATGGCGCGTTTAGAGAACTATGGCGGCCATGCGGCTGAAA 928
BSNT_03505___ 929 GTATTGAGGAGCTTATGGAAACATGTGATATTGTCATTGCTACAACGGGC 978
|.||.||.||..|.|||||||..||.|||||.|||.||||.|||||.||.
BL00922___mle 929 GCATCGAAGAATTGATGGAAAGCTGCGATATCGTCGTTGCGACAACCGGT 978
BSNT_03505___ 979 GTTCCGGGTTT----AATAA-AACCGGCATTTGTACGTTC----TGGTCA 1019
||||||||.|| ||||| ||..|| |||| .||.||
BL00922___mle 979 GTTCCGGGATTGATCAATAAGAAATGG---------GTTCGGGAAGGCCA 1019
BSNT_03505___ 1020 AGTGATTCTGGCTTTATCGAATCCGAAGCCGGAAATTGAGCCGGAGGCCG 1069
.||||||.|||||.|.||.||||||||||||||.||||||||.||||..|
BL00922___mle 1020 GGTGATTTTGGCTCTGTCCAATCCGAAGCCGGAGATTGAGCCTGAGGATG 1069
BSNT_03505___ 1070 CACTGCAGGCTGGCGCCGCATATGCAGCTGACGGGCGTTCTGTTAATAAT 1119
|.||..||||.||.||.||.||.||.||.|||||.||.|||||.||.|||
BL00922___mle 1070 CGCTCGAGGCCGGGGCAGCCTACGCTGCAGACGGACGGTCTGTCAACAAT 1119
BSNT_03505___ 1120 GTACTCGGTTTTCCGGGGATTTTTAGAGGAGCGCTTAACGCAAAAAGCAC 1169
||.||.||.||.||.||.|||||.||.||.|.|.|.||.|| |
BL00922___mle 1120 GTGCTGGGGTTCCCAGGTATTTTCAGGGGCGTGTTAAATGC--------C 1161
BSNT_03505___ 1170 GGAGATTAATCATGAT----------ATGCTTGTCGCAGCAGCAGAGGCC 1209
||||...|.|| ||| |||||.||.||.||.||.||.||.
BL00922___mle 1162 GGAGCCGATTC--GATCAGCCACCCGATGCTGGTTGCGGCCGCTGAAGCG 1209
BSNT_03505___ 1210 ATCGCAGCTTGCACTAAACAAGGTGATGTTGTCCCTCAGCCGCTTGATTC 1259
||||||.|.|||||.|.||||||.|||.||||.|||||.|||||..|..|
BL00922___mle 1210 ATCGCATCCTGCACAAGACAAGGCGATCTTGTGCCTCATCCGCTGAACCC 1259
BSNT_03505___ 1260 AAAAGTCCATCATGCG---GTAGCAGCAGCTGTCGA-------GCATGCA 1299
..|||| |||.|.| ||.||...|||.||||| |||
BL00922___mle 1260 TGAAGT---TCACGAGATTGTGGCCAAAGCAGTCGAAAGGGTCGCA---- 1302
BSNT_03505___ 1300 GCTCTTACAGCAGTG----AAATAA-------- 1320
|||.|||.|.|| ||||.|
BL00922___mle 1303 ---CTTTCAGAAATGGGAAAAATCAACGGATAA 1332
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