Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05875 and BL00914
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:57
# Commandline: needle
# -asequence dna-align/BSNT_05875___sacX.1.5803.seq
# -bsequence dna-align/BL00914___sacX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05875___sacX-BL00914___sacX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05875___sacX-BL00914___sacX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05875___sacX
# 2: BL00914___sacX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1447
# Identity: 966/1447 (66.8%)
# Similarity: 966/1447 (66.8%)
# Gaps: 137/1447 ( 9.5%)
# Score: 2977.0
#
#
#=======================================
BSNT_05875___ 1 TTGCAG---AAAGAGATTGCAAAAGAATTATTGCTGCTCGCAGGAGGAAA 47
.||||| |||||||||||||.||||.|.||||..|||...|||||...
BL00914___sac 1 GTGCAGCATAAAGAGATTGCAAGAGAACTCTTGCCCCTCATTGGAGGCGC 50
BSNT_05875___ 48 AAACAATATTATTAGCATCAGCCATTGTACGACCCGTCTTCGTTTTGATG 97
..|.|||||.||.||||||||||||||||||||..|.||.||.||..|||
BL00914___sac 51 GGAGAATATCATCAGCATCAGCCATTGTACGACAAGGCTGCGCTTCAATG 100
BSNT_05875___ 98 TAAAGGACG-AGACGAAAATTGATATACATGCCATTGAGAACCTGCAAGG 146
|.|.|||.| ||| .|||||.||||||..|||.|||||.||..||.|...
BL00914___sac 101 TCAGGGATGAAGA-AAAAATCGATATAGCTGCTATTGAAAAGATGGAGTC 149
BSNT_05875___ 147 TGTGCAGGGCACCTTTTTCCGCTATGGGCTTTTCCAGATTATCTTCGGAA 196
|||||||||.||.||||||.|.||.||..|.||||||||.||.|||||.|
BL00914___sac 150 TGTGCAGGGGACTTTTTTCAGATACGGTTTGTTCCAGATCATTTTCGGTA 199
BSNT_05875___ 197 CAGGCGTCGTCAACAAAATATATAAAGAAGTCGTTCATG----AAT---G 239
||||.||.|||||.|||||.|||||.||| ||| ||| |
BL00914___sac 200 CAGGTGTGGTCAATAAAATTTATAAGGAA-------ATGATCCAATACAG 242
BSNT_05875___ 240 GGAGACCGCGCCTTCTGAAG-AGCCTGTCAACCAGAAAAAAGCCAGCCG- 287
.||..|.||.||||.||||| ||||.||| |..||.||
BL00914___sac 243 CGATCCGGCTCCTTTTGAAGAAGCCCGTC------------GGGAGGCGC 280
BSNT_05875___ 288 ----GAAGCTGAAC-------CCCGCCGCAGCTTTTGCGAAAACACTATC 326
|||..||||| |.|| .|||||.|||||.||.||
BL00914___sac 281 GGCCGAACATGAACGTATTGACGCG-------ATTTGCCAAAACGCTGTC 323
BSNT_05875___ 327 CGATATTTTTGTGCCGATTATTCCGGCAATAACAGCAAGCGGCCTGCTCA 376
.||.||.|||||||||||.|||||.|||||....||.|||||..||||||
BL00914___sac 324 AGACATCTTTGTGCCGATCATTCCTGCAATCGTTGCGAGCGGATTGCTCA 373
BSNT_05875___ 377 TGGGGCTGATCGGCATGATTAAAGTGTTTCA--CT-GGTTCGCTGCCGGC 423
||||.||.||..|..||.|||||| ..|||| || || ||||...|||
BL00914___sac 374 TGGGTCTCATTAGTGTGCTTAAAG-AATTCAGCCTCGG--CGCTTATGGC 420
BSNT_05875___ 424 AGCCCATGGATTAAAATGCTCGACCTCGTGTCCAGCACAGCCTTT---AT 470
.||||...|||.||||||||||||.|..|.||.|||.||||.||| ||
BL00914___sac 421 GGCCCGCTGATGAAAATGCTCGACATTTTTTCAAGCTCAGCGTTTGTCAT 470
BSNT_05875___ 471 TTTAC---TGCCGATTTTAGTTGGCTTCAGTGCCGCACGGCAATTTGGCA 517
|||.| |||.|| |.||.||||||||.||....||.||||| |
BL00914___sac 471 TTTGCCTGTGCTGA------TCGGGTTCAGTGCGGCTAAACAGTTTGG-A 513
BSNT_05875___ 518 G-CAACCCATACCTAGGGGCAGTGATTGCAGGGCTTTTGACGCATCCTGA 566
| |||.||||...||||.||.||.||.|..||..|||||||.||||||||
BL00914___sac 514 GCCAATCCATTTTTAGGCGCCGTCATCGGCGGTATTTTGACCCATCCTGA 563
BSNT_05875___ 567 TCTGCTGGACCCGTCTATGCTCGGCAGCAAAACCCCGTCTTCTTTAGACA 616
|.||||.||.||.||.||||||||||||.|||..|||...||..|.||..
BL00914___sac 564 TTTGCTCGATCCTTCAATGCTCGGCAGCCAAAAGCCGGAATCCATCGAAG 613
BSNT_05875___ 617 TATGGGGGCTTCATATCCCAATGATGGGCTATCAGGGTTCCATGATACCG 666
|||..||.|||.|..||||..||||.||.||.|||||..|..|.||.|||
BL00914___sac 614 TATTCGGCCTTGAAGTCCCTTTGATCGGATACCAGGGGACAGTCATTCCG 663
BSNT_05875___ 667 ATTCTTCTT-TCCGTTTTTGTCATGAGCAAAATTGAGAAGCTATTAAAAT 715
|||| |||| |||||.|...|.|||||||||||.||.||..|.||.|||.
BL00914___sac 664 ATTC-TCTTATCCGTCTACATGATGAGCAAAATCGAAAAATTCTTGAAAA 712
BSNT_05875___ 716 CGATTGTGCCGAAGTCGCTTGATGTCGTGATCATT---CCCTTTATTACG 762
..||.||.||.|..||..|.||| .|||||.|| ||.||||||||.
BL00914___sac 713 GAATCGTCCCCAGTTCTTTAGAT---TTGATCGTTGCCCCGTTTATTACA 759
BSNT_05875___ 763 GTCATGGTGACAGG--ATGCCTCGCGCTGATTGTGATGAATCCCGCCGCG 810
|||||||...|.|| .||| |||||||.||.|.||| ..|||||
BL00914___sac 760 GTCATGGCTTCCGGGTTTGC--CGCGCTGTTTATCATG-GGCCCGC---- 802
BSNT_05875___ 811 TC-----CATCATCGGCCAGATCATGACACAATCGA-----TCGTCTATA 850
|| .||.||||.|||..|||| ||.||| |||..|.|.
BL00914___sac 803 TCTCACTGATGATCGCCCATTTCAT-----AAGCGACTGTCTCGGGTTTG 847
BSNT_05875___ 851 TTTATGATCACGCCGGCATTGC---CGCCGGAGCTCTTTTCGGCGGCATC 897
|||||.||...||.|| .|| |||||||..|.|.||.|||||..|.
BL00914___sac 848 TTTATCATTTTGCGGG---GGCGTGCGCCGGATTTTTATTTGGCGGGCTT 894
BSNT_05875___ 898 TACTCC--ACCATCGTCCTATCT----GGATTGCATCATAGCTTTTATGC 941
|||.|| || |||| |.| ||..||||.||.||.|||||||.
BL00914___sac 895 TACGCCTTAC--TCGT----TTTGAGCGGCCTGCACCACAGTTTTTATGT 938
BSNT_05875___ 942 AATTGAGGCAACGCTGCTTGCTAAT-CCGCATGTCGGTGTCAACTTTTTA 990
.|||||.||..|||||||.||..|| |||.|| .|||.|||||.|||.|.
BL00914___sac 939 GATTGAAGCGTCGCTGCTCGCAGATCCCGAAT-ACGGGGTCAATTTTCTG 987
BSNT_05875___ 991 GTGCCGATATGGTCGATGGCGAATGTGGCCCAAGGCGGAGCGGGGCTTGC 1040
.|.||.||||||||||||||.|||||.||.||.||.||||||||.||.||
BL00914___sac 988 CTTCCAATATGGTCGATGGCCAATGTCGCGCAGGGAGGAGCGGGACTCGC 1037
BSNT_05875___ 1041 GGTATTCCTCAAAACGAAACAATCAAGCCTGAAGAAA-ATTGCGCTCCCC 1089
.|||||..|.||||| |||.|||.|.|.|...||||| ||||||.|.||.
BL00914___sac 1038 CGTATTTTTGAAAAC-AAAGAATGACGGCATCAGAAAGATTGCGATTCCG 1086
BSNT_05875___ 1090 GCTTCTCTGACCGCGTTTTTAGGCATTGTTGAGCCGATTGTATTCGGGGT 1139
||||||||.||.||.|||||.||.||.||.||.|||.|..|.||.||.||
BL00914___sac 1087 GCTTCTCTCACGGCCTTTTTGGGAATCGTCGAACCGGTCATGTTTGGCGT 1136
BSNT_05875___ 1140 AAATCTCAAATTGATCCGTCCCTTTATCGGAGCAGCCATCGGCGGTGCTA 1189
.||.||.|||.|..||.|.||.||||||||.|||.|.|||||.||.||..
BL00914___sac 1137 CAACCTGAAACTCGTCAGGCCGTTTATCGGCGCATCGATCGGAGGCGCAC 1186
BSNT_05875___ 1190 TTGGCGGAGCATACGTGGTTGCGGT------ACAAGTTGTGGCAAATTCC 1233
|.||.||.|||||| ||.|| |||.||.|.|||||||||.
BL00914___sac 1187 TCGGAGGTGCATAC------GCCGTCTTCACACACGTGGCGGCAAATTCT 1230
BSNT_05875___ 1234 TACGGGCTGACAGGCATTCCGATGATTTCAATTGTGCTGCCGTTTGGCGC 1283
|||||..||.|.|||||.|||||||||||||||.|.||.||..|||||.|
BL00914___sac 1231 TACGGATTGTCCGGCATCCCGATGATTTCAATTATTCTCCCTCTTGGCAC 1280
BSNT_05875___ 1284 CGCGAATTTTGTTCATTATATGATCGGTTTTTTGATCGCAGCCGTCTCTG 1333
|||.|||.|..||||||||.|.||||.||||..|||.||.|...|.||.|
BL00914___sac 1281 CGCCAATCTCATTCATTATTTAATCGCTTTTGCGATTGCGGTGATTTCAG 1330
BSNT_05875___ 1334 CTTTTATAGCTACATTGTTTCTCGGGTTTAAAGAAGAGACAGAATAA 1380
|.|||||.||.||.||||.|||.||.||||||||.||.|.|||||||
BL00914___sac 1331 CATTTATTGCGACTTTGTGTCTTGGCTTTAAAGATGAAAAAGAATAA 1377
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