Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01278 and BL00913
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_01278___citM.1.5803.seq
# -bsequence dna-align/BL00913___citM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01278___citM-BL00913___citM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01278___citM-BL00913___citM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01278___citM
# 2: BL00913___citM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1305
# Identity: 1080/1305 (82.8%)
# Similarity: 1080/1305 (82.8%)
# Gaps: 9/1305 ( 0.7%)
# Score: 4484.0
#
#
#=======================================
BSNT_01278___ 1 GTGTTAGCAATCTTAGGCTTTCTCATGATGCTTGTGTTTATGGCATTGAT 50
|||||||||||.|||||.|||.|||||||||||||||||||||.||||||
BL00913___cit 1 GTGTTAGCAATTTTAGGTTTTTTCATGATGCTTGTGTTTATGGTATTGAT 50
BSNT_01278___ 51 CATGACAAAACGGCTTTCTGTTTTAACAGCATTAGTTTTGACGCCGATTG 100
||||||||||||||||||||||.|.||.||||||||.|||||.|||||.|
BL00913___cit 51 CATGACAAAACGGCTTTCTGTTCTGACGGCATTAGTCTTGACACCGATAG 100
BSNT_01278___ 101 TGTTTGCGCTTATCGCCGGATTTGGATTTACTGAAGTTGGGGACATGATG 150
||||||||||.|||||||||||.|||||.|..||.||.||.|||||||||
BL00913___cit 101 TGTTTGCGCTGATCGCCGGATTCGGATTCAGCGATGTCGGCGACATGATG 150
BSNT_01278___ 151 ATTTCGGGGATTCAGCAAGTCGCGCCGACTGCGGTCATGATTATGTTTGC 200
||||||||||||||||||||||||||.||.||.||.||||||||||||||
BL00913___cit 151 ATTTCGGGGATTCAGCAAGTCGCGCCAACCGCCGTTATGATTATGTTTGC 200
BSNT_01278___ 201 GATCTTATATTTTGGAATTATGATTGATACAGGCCTGTTTGATCCAATGG 250
.||.||||||||.||.||||||||||||||.|||||||||||.|||||||
BL00913___cit 201 AATTTTATATTTCGGGATTATGATTGATACTGGCCTGTTTGACCCAATGG 250
BSNT_01278___ 251 TTGGCAAAATTTTAAGCATGGTCAAAGGAGACCCTTTAAAAATTGTTGTC 300
|....|||||.||||..|||||||||||.||.||.||||||||.||.|||
BL00913___cit 251 TCACAAAAATATTAAAAATGGTCAAAGGCGATCCGTTAAAAATCGTCGTC 300
BSNT_01278___ 301 GGGACAGCGGTTCTTACAATGCTCGTCGCCTTGGACGGAGATGGCTCGAC 350
||.||.|||||.||.||.|||||.|||||.|||||||||||.||.||.||
BL00913___cit 301 GGCACTGCGGTGCTCACGATGCTGGTCGCATTGGACGGAGACGGATCAAC 350
BSNT_01278___ 351 AACGTACATGATTACGACAAGCGCCATGCTTCCGCTCTATTTGCTGCTAG 400
|||.||.||||||||.||.|||||.|||||.|||||||||||||||||.|
BL00913___cit 351 AACATATATGATTACAACGAGCGCGATGCTCCCGCTCTATTTGCTGCTTG 400
BSNT_01278___ 401 GCATCCGGCCAATTATCCTGGCGGGAATCGCGGGAGTCGGCATGGGAATC 450
|||||||.||.|||||..|.|||||||||||.||||||||||||||.||.
BL00913___cit 401 GCATCCGCCCGATTATATTAGCGGGAATCGCAGGAGTCGGCATGGGGATT 450
BSNT_01278___ 451 ATGAACACAATTCCATGGGGCGGTGCGACGCCGAGGGCGGCGAGTGCGCT 500
|||||.||.|||||||||||.||.||.||.|||.||||.|||||||||||
BL00913___cit 451 ATGAATACGATTCCATGGGGAGGCGCAACACCGCGGGCAGCGAGTGCGCT 500
BSNT_01278___ 501 GGGGGTTGATCCAGCTGAGCTTACAGGGCCGATGATTCCTGTCATTGCAA 550
.||||||||.||.|||||..|.||.||.||||||||.||||||||.|.||
BL00913___cit 501 CGGGGTTGACCCGGCTGAATTGACCGGCCCGATGATACCTGTCATCGTAA 550
BSNT_01278___ 551 GCGGGATGCTTTGTATGGTGGCGGTTGCGTATGTGCTTGGAAAAGCGGAA 600
||||.||||||||||||.|.|..|||||||||.||||.|||||||||||.
BL00913___cit 551 GCGGCATGCTTTGTATGATCGGAGTTGCGTATATGCTCGGAAAAGCGGAG 600
BSNT_01278___ 601 CGAAAGCGCCTTGGTGTGATTGAACTGAAACAGCCAGCCAATGCCAATGA 650
|||||.|||||.||.|||||||||||.|||||.||.||...|||||||||
BL00913___cit 601 CGAAAACGCCTCGGCGTGATTGAACTCAAACATCCGGCTGGTGCCAATGA 650
BSNT_01278___ 651 ACCGGCGGCAGCGGTTGAAGATGAGTGGAAGCGGCCGAAGCTTTGGTGGT 700
|.||||.||.||.|..||.||||||||||||||.||||||||||||||||
BL00913___cit 651 AACGGCCGCCGCTGCGGAGGATGAGTGGAAGCGTCCGAAGCTTTGGTGGT 700
BSNT_01278___ 701 TCAATTTATTGTTAACGCTTTCTTTAATAGGATGTTTAGTATCGGGTAAA 750
||||.||||||||.||||||||.||.|||||...|.|..||||.||.|||
BL00913___cit 701 TCAACTTATTGTTGACGCTTTCATTGATAGGGCTTCTCATATCAGGAAAA 750
BSNT_01278___ 751 GTTAGTTTAACCGTACTGTTTGTCATTGCGTTTTGTATTGCGCTGATTGT 800
||.||.||.|||||.||||||.|.||.|||||.||.||.||..|||||||
BL00913___cit 751 GTAAGCTTGACCGTTCTGTTTATTATCGCGTTCTGCATCGCATTGATTGT 800
BSNT_01278___ 801 GAATTATCCCAATCTCGAGCATCAGAGACAGCGCATCGCGGCGCATTCCA 850
.||||||||.||.|||||.||||||||||||||.||..||||||||||.|
BL00913___cit 801 CAATTATCCAAACCTCGATCATCAGAGACAGCGAATTTCGGCGCATTCGA 850
BSNT_01278___ 851 GCAACGTGCTGGCTATCGGTTCAATGATTTTTGCCGCGGGGGTGTTCACG 900
||||.||..|||||||||||||||||||.||||||||.|||||.||.||.
BL00913___cit 851 GCAATGTATTGGCTATCGGTTCAATGATATTTGCCGCAGGGGTCTTTACC 900
BSNT_01278___ 901 GGGATTTTGACAGGCACGAAAATGGTTGATGAAATGGCGATCTCGCTCGT 950
||.||..|.||||||||.||||||||.||||||||||||||.|||||.|.
BL00913___cit 901 GGAATACTAACAGGCACAAAAATGGTAGATGAAATGGCGATTTCGCTTGC 950
BSNT_01278___ 951 GTCCATGATACCGGAACAAATGGGCGGATTGATCCCAGCGATTGTTGCCT 1000
|||.|||||.||.||||||||||||||.||.||.||...|||.||.||||
BL00913___cit 951 GTCTATGATTCCTGAACAAATGGGCGGCTTTATTCCGATGATAGTAGCCT 1000
BSNT_01278___ 1001 TAACAAGCGGTATTTTCACATTTTTGATGCCGAATGACGCGTATTTCTAC 1050
||||||||||.||||||||.|||.||||||||||||||||.|||||.|||
BL00913___cit 1001 TAACAAGCGGCATTTTCACTTTTCTGATGCCGAATGACGCTTATTTTTAC 1050
BSNT_01278___ 1051 GGGGTGCTGCCGATTTTATCAGAAACAGCTGTCGCATACGGTGTGGATAA 1100
||.|||||.|||||||||||||||||.|||||||||||||||||..||||
BL00913___cit 1051 GGAGTGCTCCCGATTTTATCAGAAACCGCTGTCGCATACGGTGTTAATAA 1100
BSNT_01278___ 1101 AGTGGAAATTGCCAGAGCCTCTATTATCGGCCAGCCGATTCATATGCTGA 1150
.||.||||||||.||||||||.||.|||||||||||||||||.|||||||
BL00913___cit 1101 GGTCGAAATTGCAAGAGCCTCCATCATCGGCCAGCCGATTCACATGCTGA 1150
BSNT_01278___ 1151 GTCCGCTTGTGCCATCCACTCATTTGCTTGTCGGACTCGTCGGAGTTTCT 1200
|.|||||||||||.||.||.|||||||||||.||.||.|||||.|||||.
BL00913___cit 1151 GCCCGCTTGTGCCTTCAACACATTTGCTTGTTGGGCTTGTCGGGGTTTCC 1200
BSNT_01278___ 1201 ATTGATGACCATCAAAAATTCGCATTGAAATGGGCGGTTCTCGCAGTGAT 1250
||.||.||.|||||||||||.||..|.|..||||||||.|||||.||.||
BL00913___cit 1201 ATCGACGATCATCAAAAATTTGCGATAATGTGGGCGGTGCTCGCTGTCAT 1250
BSNT_01278___ 1251 CGTCATGAC-GGCTAT-CGCTCTATTGATCGGTGCGATCTCTATTTCCGT 1298
|||.||||| || || |||.||..|.|||||..|.||.||.||| |
BL00913___cit 1251 CGTGATGACAGG--ATGCGCGCTTCTCATCGGATCCATATCAATT----T 1294
BSNT_01278___ 1299 A-TGA 1302
| |||
BL00913___cit 1295 ATTGA 1299
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