Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01275 and BL00911
See
Amino acid alignment /
Visit
BSNT_01275 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_01275___citT.1.5803.seq
# -bsequence dna-align/BL00911___citT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01275___citT-BL00911___citT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01275___citT-BL00911___citT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01275___citT
# 2: BL00911___citT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 696
# Identity: 535/696 (76.9%)
# Similarity: 535/696 (76.9%)
# Gaps: 30/696 ( 4.3%)
# Score: 2069.5
#
#
#=======================================
BSNT_01275___ 1 TTGATTCACATCGCGATTGCGGAGGATGATTTTCGAGTTGCGCAAATCCA 50
||||||.|.||||.|||.||||||||||||||.||.||.||||||||.||
BL00911___cit 1 TTGATTGATATCGTGATCGCGGAGGATGATTTCCGTGTAGCGCAAATTCA 50
BSNT_01275___ 51 TGAGAGATTGATTAAACAGCTTGATGGATTCAAGATTATCGGCAAGGCGG 100
|||.||||||||..|||||||||||||||||||.||||||||.||.||||
BL00911___cit 51 TGAAAGATTGATCGAACAGCTTGATGGATTCAACATTATCGGTAAAGCGG 100
BSNT_01275___ 101 CTAACGCAAAAGAGACATTGGCGCTTTTGAAGGAACACAAGGTTGATTTG 150
|.||.||.|||||.|||.|||...||.|..|||..|..||||..||.|||
BL00911___cit 101 CCAATGCCAAAGAAACAATGGAAATTCTCGAGGTCCGAAAGGCCGACTTG 150
BSNT_01275___ 151 CTTCTGCTGGATATTTATATGCCGGACGAGCTTGGGACCGCGTTGATTCC 200
||.|||.||||||||||.||||||||.|||.|.||.||..|.||||||||
BL00911___cit 151 CTGCTGTTGGATATTTACATGCCGGATGAGATGGGCACAACATTGATTCC 200
BSNT_01275___ 201 TGATATACGAAGCCGATTTCCTGAAGTGGACATTATGATTATCACAGCGG 250
||..||.||||..||.|||||.||||||||.||.|||||.||||||||.|
BL00911___cit 201 TGTCATTCGAAAACGGTTTCCGGAAGTGGATATCATGATCATCACAGCAG 250
BSNT_01275___ 251 CAACAGAAACCCGGCATTTGCAGGAAGCGCTAAGAGCAGGAATTGCCCAC 300
||||.|||||..|.|||||.||||||.||||..|.||.|||||||..|||
BL00911___cit 251 CAACCGAAACATGTCATTTACAGGAATCGCTCCGGGCGGGAATTGTGCAC 300
BSNT_01275___ 301 TATTTGATCAAACCCGTAACGGCTGACAAGTTCAGGCAGGTGCTGCTTCA 350
||||||||.||.||.||.||.||.||.||.||||..||||||||||||||
BL00911___cit 301 TATTTGATTAAGCCTGTGACTGCCGAAAAATTCAAACAGGTGCTGCTTCA 350
BSNT_01275___ 351 GTATAAAGAAAAAAGG---AAGCTGCTCATGTCTCAGCCGGAGGTCAGCC 397
.|||||..|||||||| |..|||| |.||||||||..|||||||||
BL00911___cit 351 ATATAAGAAAAAAAGGCAAACACTGC---TTTCTCAGCCACAGGTCAGCC 397
BSNT_01275___ 398 AATCCATGATCGACCATATTTTTGGGAACAGTGTGAAGACAGCT------ 441
||||.|||||.|||||.||.||.|| ||||..||
BL00911___cit 398 AATCAATGATTGACCAAATCTTCGG-----------AGACTTCTCCAGCG 436
BSNT_01275___ 442 -TTGCC----GGCAGAGGATTTGCCGACTGGCATTAATTCGATTACACTG 486
.|.|| |||.||||||||||||||.||.||.|||||||||||||||
BL00911___cit 437 GATCCCGTCAGGCTGAGGATTTGCCGACAGGTATCAATTCGATTACACTG 486
BSNT_01275___ 487 CGAAAAATTAAGGAAGCGCTTC-AGACTGCGTCAGAAGGATTGACAGCGG 535
|.||||||.|.|||.|..||.| |||| ||..|..|||||.|||||||.|
BL00911___cit 487 CAAAAAATCAGGGATGTTCTGCGAGAC-GCAGCTAAAGGAATGACAGCCG 535
BSNT_01275___ 536 AGGAACTTGGGGAAAAAATGGGGGCGTCACGAACAACTGCCCGCCGTTAT 585
|.|||||.||.||||||||||||||.|||||.|||||.||||||||.|||
BL00911___cit 536 AAGAACTCGGTGAAAAAATGGGGGCTTCACGTACAACAGCCCGCCGCTAT 585
BSNT_01275___ 586 GCCGAGTATCTTGTGTCAAAGGAAGAAGCAAGAGCCGAGCTTGAATACGG 635
|||||.|||||.||||||||.||||||||..|.||.|||||.||||||||
BL00911___cit 586 GCCGAATATCTCGTGTCAAAAGAAGAAGCGCGCGCTGAGCTGGAATACGG 635
BSNT_01275___ 636 GATTATCGGCAGGCCGGAGAGAAAATATTATTTGGCGGCGGATTAG 681
.|||||||||||.||||||||||||||.||||||||||..||.||.
BL00911___cit 636 AATTATCGGCAGACCGGAGAGAAAATACTATTTGGCGGATGAATAA 681
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.