Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01274 and BL00910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_01274___citS.1.5803.seq
# -bsequence dna-align/BL00910___citS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01274___citS-BL00910___citS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01274___citS-BL00910___citS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01274___citS
# 2: BL00910___citS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1645
# Identity: 1255/1645 (76.3%)
# Similarity: 1255/1645 (76.3%)
# Gaps: 50/1645 ( 3.0%)
# Score: 4779.0
#
#
#=======================================
BSNT_01274___ 1 GTGGTGAAAAAGCGGTTCCATTTTTCCCTGCAAACAAAAATAATGGGGCT 50
|||||.|||||.|||.||.|||||||.||||||||||||||.|||||..|
BL00910___cit 1 GTGGTCAAAAAACGGGTCAATTTTTCTCTGCAAACAAAAATTATGGGCTT 50
BSNT_01274___ 51 GATTGCGGCTCTGCTGGTCTTTGTCATTGGTGTGCTGACCATTACGTTAG 100
||||||.||.|||||..||||.||.||.||..|||||||..|.|||||.|
BL00910___cit 51 GATTGCAGCACTGCTTATCTTAGTAATCGGCTTGCTGACAGTCACGTTTG 100
BSNT_01274___ 101 CCGTTCAGCATACACAGGGAGAACGGAGACAGGCAGAGCAGCTGGCGGTT 150
||||||||||.|||.|.|.||.|.|.|.||||.|.||.|||||.||.|||
BL00910___cit 101 CCGTTCAGCAAACAAAAGAAGGAAGAAAACAGTCCGAACAGCTTGCCGTT 150
BSNT_01274___ 151 CAAACGGCGAGAACCATTTCCTATATGCCGCCGGTTAAAGAGCTCATTGA 200
||.||.||.|.|||||||||.||||||||.|||||.|||||||||.||.|
BL00910___cit 151 CAGACTGCAAAAACCATTTCTTATATGCCTCCGGTAAAAGAGCTCTTTCA 200
BSNT_01274___ 201 GAGAAAAG-GCGGACATGCGGCTGAGACGCAAGAGGTCATTGAACAAATG 249
|.|.||| ||||.|||..||..|||.|||||||||||||||||||||||
BL00910___cit 201 -AAAGAAGCGCGGGCATAAGGGAGAGGCGCAAGAGGTCATTGAACAAATG 249
BSNT_01274___ 250 AAAGAACAGACTGGCGCGTTTGCCATTTATGTTTTGGACGAAAAAGGAGA 299
|||||||||||.||.||.|.|.|.||||||||..|..|||||||.|||||
BL00910___cit 250 AAAGAACAGACCGGTGCCTATACTATTTATGTCCTCAACGAAAAGGGAGA 299
BSNT_01274___ 300 CATTCGCAGCGCCTCTGGAAAA-AGCGGATTAAA-GAAACTG----GAGC 343
.||....|.|||||| |||||| ||.|| |.||| |||.||| ||
BL00910___cit 300 GATCAAAATCGCCTC-GGAAAAGAGAGG-TCAAACGAAGCTGACAAGA-- 345
BSNT_01274___ 344 GCAGCAGAGAAATTTTGTTTGGTGGTTCGCATGTTTCTGAAACAAAAGCG 393
||||||.||||.|||||.||.||.||.||..|.|||.||||||||...
BL00910___cit 346 --AGCAGAAAAATCTTGTTCGGCGGCTCTCACATCTCTAAAACAAAAAAC 393
BSNT_01274___ 394 GATGGACGAAGAGTGATCAGAGGAAGCGCGCCGATCATAAAAGAACAGAA 443
|||||.||.|..||||||||||||||.||||||||.||..|.||||| ||
BL00910___cit 394 GATGGCCGCATGGTGATCAGAGGAAGTGCGCCGATTATCCAGGAACA-AA 442
BSNT_01274___ 444 G-GGATACAGCCAAGTGATCGGCAGCGTGTCTGTTGATTTTCT-ACAAAC 491
| ||.||||||.|.||.||||||||.||||||||||||||||| ..||||
BL00910___cit 443 GTGGTTACAGCAAGGTCATCGGCAGTGTGTCTGTTGATTTTCTGTTAAAC 492
BSNT_01274___ 492 GGAGACAGAGCAAAGCATCAAAAAGCATTTGAGAAATTTGAGTGTGATTG 541
||||||||.|||.|.||.|||.||.||.|||||||.|||||..|.||.|
BL00910___cit 493 -GAGACAGAACAACGTATTAAAGAGAATGTGAGAAAATTGAGCTTCATGG 541
BSNT_01274___ 542 CTGTGCTTGTACTGCTGCTCGGATTTATTGGCGCCGCCGTGCTGGCGAAA 591
||||.||.||..||||..|.||||||...||.|||||||..||.||.|||
BL00910___cit 542 CTGTTCTCGTTTTGCTCATAGGATTTGCGGGTGCCGCCGCTCTTGCCAAA 591
BSNT_01274___ 592 AGCATCAGAAAGGATACGCTTGGGCTTGAGCCGCATGAGATCGCGGCTCT 641
|||||.|||||.|||||||||||.|||||.||.||.|||||.||..||||
BL00910___cit 592 AGCATTAGAAAAGATACGCTTGGCCTTGAACCCCAAGAGATTGCATCTCT 641
BSNT_01274___ 642 ATATCGTGAGAGAAACGCAATGCTTTTCGCGATTCGAGAAGGGATTATTG 691
.||.|||||..||||.||.|||||....||||||..|||||||||.||||
BL00910___cit 642 TTACCGTGAACGAAATGCGATGCTGCGTGCGATTAAAGAAGGGATCATTG 691
BSNT_01274___ 692 CCACCAATCGTGAAGGCGTCGTCACCATGATGAACGTATCGGCGGCCGAG 741
|||||||.||||||||.||||||||.|||||||||||||||||.||.||.
BL00910___cit 692 CCACCAACCGTGAAGGAGTCGTCACAATGATGAACGTATCGGCAGCGGAA 741
BSNT_01274___ 742 ATGCTGAAGCTGCCCGAGCCTGTGATCCATCTTCCTATAGATGACGTCAT 791
|||||.|.|||.|||||.||||||.||.|.|..||.||.||||||.||.|
BL00910___cit 742 ATGCTTAGGCTTCCCGAACCTGTGGTCAACCGGCCAATTGATGACATCCT 791
BSNT_01274___ 792 GCCGGGAGCAGGGCTGATGTCTGTGCTTGAACAAGGAGAAATGCTGCCGA 841
|||.|||||.||..|.||||||||.|||.|.||..|..|.|||.|||.||
BL00910___cit 792 GCCCGGAGCCGGAATAATGTCTGTCCTTCAGCAGCGGCAGATGTTGCTGA 841
BSNT_01274___ 842 ACCAGGAGGTAAGCGTCAACGATCAAGTGTTTATTATCAATACGAAAGTG 891
|.||||||||..|||||||||||||||||||||||.|.|||||.|||.||
BL00910___cit 842 ATCAGGAGGTCTGCGTCAACGATCAAGTGTTTATTTTAAATACAAAAATG 891
BSNT_01274___ 892 ATGAATCAAGGCGGGCAGGTGTATGGGATTGTCGTCAGCTTCAGGGAGAA 941
|||...|||..|||.||....||.||.||||||||.||.|||.|..|.||
BL00910___cit 892 ATGCTCCAAAACGGTCAAACTTACGGAATTGTCGTAAGTTTCCGTCAAAA 941
BSNT_01274___ 942 AACAGAGCTGAAGAAGCTGATCGACACATTGACAGAGGTTCGCAAATATT 991
|||.|||.|.||.|.|||.||.|||||..||||||||||.|..|||||.|
BL00910___cit 942 AACCGAGTTAAAAAGGCTCATTGACACGCTGACAGAGGTGCAAAAATACT 991
BSNT_01274___ 992 CAGAGGATCTCAGGGCGCAGACTCATGAATTTTCAAATAAGCTTTATGCG 1041
|.||.||||||.|.|||||.||.||||||||.||||||||||||||||.|
BL00910___cit 992 CTGAAGATCTCCGCGCGCAAACACATGAATTCTCAAATAAGCTTTATGTG 1041
BSNT_01274___ 1042 ATTTTAGGGCTGCTTGAGCTTGGGGAGTATGATGAAGCCATTGATCTGAT 1091
||..||||.|||||||||||.||.||||||||.|.|||.||.||.|||||
BL00910___cit 1042 ATCCTAGGCCTGCTTGAGCTAGGTGAGTATGAAGCAGCGATCGACCTGAT 1091
BSNT_01274___ 1092 TAAAGAGGAATATGCGATGCAAAATGAACAGCATGATCTTTTATTCCATA 1141
||||||||||||.||.||.||||||||||||||.||..||||||||.|.|
BL00910___cit 1092 TAAAGAGGAATACGCCATTCAAAATGAACAGCACGACATTTTATTCAAAA 1141
BSNT_01274___ 1142 ACATCCATTCGCAGCAGGTGCAGGCCATTTTGTTAGGGAAAATAAGCAAG 1191
||||.|||||.||||||||||||||.||..||||.||.|||||..|.|||
BL00910___cit 1142 ACATTCATTCTCAGCAGGTGCAGGCTATCCTGTTGGGCAAAATGGGAAAG 1191
BSNT_01274___ 1192 GCATCGGAAAAGAAGGTCAAGCTGGTGATTGATGAGAACAGCTCACTCGC 1241
||.|||||.||.||.||.|||.||...||||||||.||||||.|.||.|.
BL00910___cit 1192 GCTTCGGAGAAAAAAGTTAAGTTGTCCATTGATGAAAACAGCACGCTTGA 1241
BSNT_01274___ 1242 GCCTCTTCCTGCGCATATCGGCTTGTCCCATCTTATTACGATTATTGGCA 1291
|||.|||||||.|||||||||..||||.|||||.||||||||.||.||.|
BL00910___cit 1242 GCCGCTTCCTGAGCATATCGGGATGTCTCATCTCATTACGATCATCGGGA 1291
BSNT_01274___ 1292 ATTTAATTGATAACGCTTTCGAAGCTGTAGCGGAGCAAAGCGTGAAGGAA 1341
|||||||||||||||||||||||||.|||||.|||||||..|||..|...
BL00910___cit 1292 ATTTAATTGATAACGCTTTCGAAGCCGTAGCTGAGCAAAATGTGCGGCTT 1341
BSNT_01274___ 1342 GTTTTGTTTTTTATCACGGATATGGGCCATGACATTGTCATTGAAGTATC 1391
||||..|||||.|||||.||.||.||||..||.||||||||.|||||..|
BL00910___cit 1342 GTTTCATTTTTCATCACTGACATCGGCCGCGATATTGTCATAGAAGTGGC 1391
BSNT_01274___ 1392 AGACACAGGGCCCGGTGTGCCGCCAGAGAAAATAGAAGCTGTGTTTGAGA 1441
.||||||||...|||.||..||||.||.||.||..||||..|.|||||..
BL00910___cit 1392 TGACACAGGATGCGGCGTAGCGCCTGATAAGATGAAAGCCATCTTTGAAC 1441
BSNT_01274___ 1442 GAGGCTATTCTTCAAAGGGGATGAGGAGAGGCTACGGTCTGGCCAATGTG 1491
||||.|||||||||||||||||||.||||||||||||.||||||||.||.
BL00910___cit 1442 GAGGATATTCTTCAAAGGGGATGAAGAGAGGCTACGGGCTGGCCAACGTA 1491
BSNT_01274___ 1492 AAAGACTCAGTGCGTGAACTGGGCGGCTGGATCGAACTGGCGAATCAAAA 1541
||.||.||.||.||||||||.|||||.|||||.|||.||||.||||||||
BL00910___cit 1492 AAGGAATCTGTACGTGAACTTGGCGGTTGGATTGAAGTGGCCAATCAAAA 1541
BSNT_01274___ 1542 AACTGGCGGGGCGGTATTCACTGTGTTTATACCGAAGGAGAAACAA---- 1587
|...|||||.||||||||.||.||.|||||||||||||||||.|||
BL00910___cit 1542 AGGCGGCGGAGCGGTATTTACCGTTTTTATACCGAAGGAGAAGCAAACAC 1591
BSNT_01274___ 1588 ---AGGGGGAATCCATTTGATTCACATCGCGATTGCGGAGGATGA 1629
|||||||||||||||||
BL00910___cit 1592 GAGAGGGGGAATCCATTTGA------------------------- 1611
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