Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02780 and BL00903
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_02780.1.5803.seq
# -bsequence dna-align/BL00903___aprX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02780-BL00903___aprX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02780-BL00903___aprX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02780
# 2: BL00903___aprX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1368
# Identity: 837/1368 (61.2%)
# Similarity: 837/1368 (61.2%)
# Gaps: 234/1368 (17.1%)
# Score: 2701.5
#
#
#=======================================
BSNT_02780 0 -------------------------------------------------- 0
BL00903___apr 1 ATGTTCGGTTCCTACATGGTTCAAATGGTAAGGTCCAACGCCCATAAGCT 50
BSNT_02780 0 -------------------------------------------------- 0
BL00903___apr 51 GGACCGGCCGCTGAGAGAAAGCGTGCTGAAACTCTATAAACCTTTTAAAT 100
BSNT_02780 0 -------------------------------------------------- 0
BL00903___apr 101 GGACGCCTTGCTTTTTACACGGTTTTTTCGAAAAAATATTAATGAAAAAC 150
BSNT_02780 1 ------ATGTCAGTCATTATCGAATTTGAGGAAGGCTGTCACGAGACCGG 44
||..||||||||||.||||||||..|||.||||||..|.|..||
BL00903___apr 151 AAAAAAATACCAGTCATTATTGAATTTGAAAAAGACTGTCAGCATAAAGG 200
BSNT_02780 45 CTTTCA-------AATGGCTGGAGAGGTGCTGCA--AAAAGAA-AAACGC 84
||.||| ||| ||.|.|..|.||| ||||||| ||||
BL00903___apr 201 CTATCAATTAGTCAAT-----GAAATGATCGGCAGCAAAAGAAGAAAC-- 243
BSNT_02780 85 AGCAAGCTAAA---AAGC--CGCTTCAACAAAATCAACTGCTGCAGCGCC 129
||| |||| ||||||..|||..|.|.||||||||||||.
BL00903___apr 244 --------AAAATCAAGCATCGCTTCTCCAACGTTAGCTGCTGCAGCGCT 285
BSNT_02780 130 GAGGTTACTCCTTCAGCATTACATTCCCTTCTCTCTGAATGCAGCAATAT 179
||.||.||.|||||..|.||.||.||.|||||.|||||.|||.||.|.||
BL00903___apr 286 GAAGTCACCCCTTCTTCTTTGCAATCGCTTCTATCTGAGTGCGGCGACAT 335
BSNT_02780 180 CCGTAAAGTGTATTTAAACCGCGAAGTCAAAGCGCTTTTAGACACTGCAA 229
.||.|||.|.||||||||.|||.||||.||||||||..|.|||...||..
BL00903___apr 336 TCGCAAAATTTATTTAAATCGCAAAGTAAAAGCGCTCCTCGACGTAGCGG 385
BSNT_02780 230 CCGAAGCAAGCCATGCGAAGGAAGTCGTCAGAAACGGGCAAACCCTGACA 279
..|||.||||||||||.||.|||||.|||||||||...||.||.||||||
BL00903___apr 386 TTGAATCAAGCCATGCCAAAGAAGTGGTCAGAAACAATCAGACGCTGACA 435
BSNT_02780 280 GGAAAAGGTGTTACTGTCGCTGTTGTCGATACAGGAATCTACCCGCATCC 329
||.|||||.||.||.||||||||..|.|||||.||..|.|||||.||...
BL00903___apr 436 GGCAAAGGAGTGACAGTCGCTGTCATTGATACGGGCGTATACCCTCACGA 485
BSNT_02780 330 TGATCTAGAAGGCAGAATTATCGGATTCGC-GGACATGGTCAATCAAAAA 378
.|||||.||||||||.||.| .||.||..| .|||.|..||||.||.|.|
BL00903___apr 486 AGATCTTGAAGGCAGGATCA-GGGCTTTTCAAGACTTTATCAACCAGAGA 534
BSNT_02780 379 ACAGAGCCGTACGATGATAATGGTCATGGCACACACTGTGCAGGTGATG- 427
|||||.||.||.|||||.|||||.||.|||||||||||.||.|||||||
BL00903___apr 535 ACAGAACCCTATGATGACAATGGGCACGGCACACACTGCGCCGGTGATGC 584
BSNT_02780 428 TCGC----AAGCAGCGGCGCATCCTCTTCCGGTCAATACCGCGGCCCTGC 473
|.|| |.|.||||| ||||.||.|||||.||||||||.|||||
BL00903___apr 585 TTGCGGAAACGGAGCGG-----CCTCATCGGGTCAGTACCGCGGACCTGC 629
BSNT_02780 474 ACCGGAAGCCAATCTCATCGGCGTAAAGGTATTAAACAAGCAGGGTTCAG 523
.||.|||||..|.||..||||.|||||.|||||..||||...|||.||.|
BL00903___apr 630 TCCTGAAGCAGAACTTGTCGGTGTAAAAGTATTGGACAAAATGGGATCCG 679
BSNT_02780 524 GAACGTTAGCAGATATTATAGAGGGTGTTGAGTGGTGTATTCAATACAAT 573
||.||.|.|.|....|.||..|.||.||.||.|||||.|||||||.||||
BL00903___apr 680 GATCGCTCGAAACCGTCATTCAAGGCGTAGATTGGTGCATTCAATTCAAT 729
BSNT_02780 574 GAGGACAACCCCGATGAACCGATTGATATTATTAGCATGTCGCTCGGGGG 623
.||||.||.||.|||||.|||||.||.||||||...||||| .|.|||.|
BL00903___apr 730 AAGGAAAATCCTGATGATCCGATCGACATTATTTCAATGTC-ATTGGGTG 778
BSNT_02780 624 C-GATGCCCTTAGATATGATCATGAACAGGAAGATCCGTTAGTCAGAGCG 672
| ||.|||.|..|.||.||..|||||.|.||||||||..|.||.|.|||.
BL00903___apr 779 CAGAAGCCTTGCGCTACGAGAATGAAGAAGAAGATCCAGTCGTTAAAGCT 828
BSNT_02780 673 GTTGAGGAAGCGTGGAGCGCAGGGATTGTCGTCTGTGTCGCTGCCGGAAA 722
|||.|.|.|||.|||..||||||.|||||.||.||||..||.|||||.||
BL00903___apr 829 GTTCATGCAGCATGGGACGCAGGCATTGTTGTATGTGCGGCAGCCGGCAA 878
BSNT_02780 723 CTCAGGCCCTGATTCGCAGACCATTGCAAGCCCGGGCGTGAGCGAAAAGG 772
|||.||.||||||.||||.||.|||||.||||||||.||.|||...|||.
BL00903___apr 879 CTCCGGTCCTGATGCGCAAACGATTGCCAGCCCGGGTGTCAGCAGCAAGA 928
BSNT_02780 773 TGATTACAGTAGGTGCGCTTGACGATAACA---ATACTGCAAGCAGCGAT 819
|.||||||||.||.|| |||| |||.||| ||||.|..|||.|.||.
BL00903___apr 929 TTATTACAGTCGGAGC-CTTG--GATGACAGGGATACAGTCAGCCGGGAG 975
BSNT_02780 820 GATGATACTGTCGCTTCCTTCTCAAGCCGCGGCCCGACAGTATATGGGAA 869
|||||...||||||.||.|..||||||.|.||.||||||.|.|||||..|
BL00903___apr 976 GATGACGATGTCGCCTCTTATTCAAGCAGAGGGCCGACAATCTATGGTCA 1025
BSNT_02780 870 AGAAAAGCCCGATATTTTAGCGCCGGGTGTTAATATTATTTCCCTTCGCT 919
||..||.||.||..|..|.|..|||||....|||||||..||.|||||.|
BL00903___apr 1026 AGTCAAACCGGACTTGCTGGTACCGGGCACAAATATTACGTCGCTTCGTT 1075
BSNT_02780 920 CTCC--GAATTCTTATATTGATAAGCTCCAAAAGTCAAGCCGTGTAGGGT 967
|.|| || ||||.|.|.||||||||.|||||..|||.|.|.||.||..
BL00903___apr 1076 CACCCGGA--TCTTTTCTCGATAAGCTGCAAAAAACAAACAGAGTCGGCA 1123
BSNT_02780 968 CTCAGTACTTTACAATGTCAGGAACCTCGATGGCAACACCGATTTGCGCA 1017
|..|.||..|.|||.||||.||||||||||||||.||.|||||.||||||
BL00903___apr 1124 CAAAATATATGACATTGTCCGGAACCTCGATGGCTACGCCGATCTGCGCA 1173
BSNT_02780 1018 GGAATCGCAGCTTTAATTCTTCAGCACAACCCGG-------ATCTTACCC 1060
|||||.||.||..|.||.||||||||...||||| | |
BL00903___apr 1174 GGAATTGCCGCACTTATCCTTCAGCAAGCCCCGGGCACAGAA-------C 1216
BSNT_02780 1061 CTGATGAAGTAAAAGAGCTTTTGAAAAACGGCACGGACAAATGGAAAGAT 1110
||||||||||.|||.||||..|.|...||||.||.||...||||||||||
BL00903___apr 1217 CTGATGAAGTCAAACAGCTGCTAATGGACGGTACCGATTTATGGAAAGAT 1266
BSNT_02780 1111 GAAGATCCGAATATCTACGGAGC-GGGCGCTGTCAACGCAGAA-AATTCC 1158
...|||||.|||.|.|||||.|| |||..| .||||||||||| ||| |
BL00903___apr 1267 CGCGATCCAAATGTTTACGGTGCAGGGTAC-ATCAACGCAGAACAAT--C 1313
BSNT_02780 1159 GTTCCCGGCCAA---TAA 1173
|.|.||| ||| |||
BL00903___apr 1314 GGTGCCG--CAAGACTAA 1329
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