Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00124 and BL00854
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence dna-align/BSNT_00124___hslO.1.5803.seq
# -bsequence dna-align/BL00854___hslO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00124___hslO-BL00854___hslO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00124___hslO-BL00854___hslO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00124___hslO
# 2: BL00854___hslO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 892
# Identity: 661/892 (74.1%)
# Similarity: 661/892 (74.1%)
# Gaps: 38/892 ( 4.3%)
# Score: 2419.0
#
#
#=======================================
BSNT_00124___ 1 ATGGATTATTTAGTAAAAGCACTTGCGTATGACGGAAAAGTTCGGGCTTA 50
||||||||||||||.|||||..||||.||||||||.|||||..||||.||
BL00854___hsl 1 ATGGATTATTTAGTGAAAGCCATTGCATATGACGGCAAAGTGAGGGCATA 50
BSNT_00124___ 51 TGCGGCGAGAACGACTGATATGGTAAATGAGGGGCAGAGACGCCATGGTA 100
|||.||||..||.||.||.|.|.|..||||.|..||.|||.|.|||...|
BL00854___hsl 51 TGCAGCGAATACAACAGAAACGATTCATGAAGCCCAAAGAAGGCATAACA 100
BSNT_00124___ 101 CGTGGCCGACAGCATCCGCTGCATTGGGCCGCACAATGACAGCTTCACTT 150
|.|||||.||.||.|||||.||.||.||..|.||.|||||.||..|..|.
BL00854___hsl 101 CATGGCCTACCGCTTCCGCCGCTTTAGGAAGAACGATGACGGCGGCTGTC 150
BSNT_00124___ 151 ATGCTCGGCGCTATGCTGAAGGGCGATGATAAGCTGACCGTGAAAATCGA 200
|||||||||||.||||||||.|||||.||.|||||.|||||.||.||.||
BL00854___hsl 151 ATGCTCGGCGCCATGCTGAAAGGCGAAGACAAGCTCACCGTTAAGATTGA 200
BSNT_00124___ 201 GGGCGGAGGTCCGATCGGAGCTATTGTAGCTGATGCCAATGCCAAAGGAG 250
.||.||.||.||||||||.||.|||||.|||||.|..|||||.|||||||
BL00854___hsl 201 AGGAGGCGGACCGATCGGCGCGATTGTCGCTGACGGAAATGCAAAAGGAG 250
BSNT_00124___ 251 AAGTCAGAGCCTATGTCTCTAACCCGCAAGTTCATTTTGATTTAAATGAA 300
|.|||||.|..||.||.||.||.|||||.||||||||.||.|||||||||
BL00854___hsl 251 ACGTCAGGGGATACGTGTCCAATCCGCACGTTCATTTCGACTTAAATGAA 300
BSNT_00124___ 301 CAAGGCAAGCTTGATGTCAGACGTGCGGTTGGAACAAACGGAACGTTAAG 350
||.|||||.|||||.||||||.|.||.||.||.||....||||||.||||
BL00854___hsl 301 CACGGCAAACTTGACGTCAGAAGAGCCGTCGGTACGTCAGGAACGCTAAG 350
BSNT_00124___ 351 TGTCGTAAAAGATTTAGGTTTGCGCGAGTTCTTCACAGGACAAGTAGAAA 400
.||.|||||||||.|.|||.|.|||||.||.||.|||||.||.||.||.|
BL00854___hsl 351 CGTAGTAAAAGATCTCGGTCTCCGCGATTTATTTACAGGCCAGGTTGAGA 400
BSNT_00124___ 401 TCGTTTCAGGAGAATTAGGCGATGATTTCACTTACTATCTTGTATCATCT 450
|||||||.||||||.|.|||||.|||||.|||||.|||||.||.||.|||
BL00854___hsl 401 TCGTTTCCGGAGAAATCGGCGAGGATTTTACTTATTATCTCGTGTCCTCT 450
BSNT_00124___ 451 GAGCAGGTTCCTTCATCAGTGGGCGTAGGTGTGCTCGTAAATCCTGACAA 500
||.|||||||||||.||.|||||.|||||.||||||||.||.||.|||||
BL00854___hsl 451 GAACAGGTTCCTTCTTCGGTGGGTGTAGGGGTGCTCGTCAACCCCGACAA 500
BSNT_00124___ 501 TACCATTCTTGCGGCAGGGGGCTTTATTATTCAGCTGATGCCGGGAACAG 550
|||.|||.|.||.|||||.||.|||||..|.||||||.||||||||||.|
BL00854___hsl 501 TACGATTTTAGCTGCAGGCGGATTTATCCTGCAGCTGCTGCCGGGAACGG 550
BSNT_00124___ 551 ATGATGAAACAATCACAAAAATTGAA--CAGCGTCTATCTCAAGTAGAGC 598
|.||.|||||.|||||.||..||||| .|.| ||.||.|||||.||||
BL00854___hsl 551 ACGACGAAACCATCACGAAGCTTGAAACAAAC--CTTTCACAAGTGGAGC 598
BSNT_00124___ 599 CGATTTCTAAGCTCATCCAAAAAGGGCTGACACCAGAAGAAATTTTAGAA 648
|.|||||.|||||.||.||.|||||..||||||| .||.
BL00854___hsl 599 CAATTTCAAAGCTGATTCAGAAAGGTTTGACACC------------TGAG 636
BSNT_00124___ 649 GAAGTCCTAGGC-----------GAGA--AACCTGAGATTTTGGAAACGA 685
|||||.|| ||| |||| ||||.||..|..|||||||..
BL00854___hsl 637 GAAGTGCT-GGCTGCGGTATTGGGAGAAGAACCGGAAGTACTGGAAACCG 685
BSNT_00124___ 686 TGCCTGTCAGA-TTCCATTGCCCTTGTTCAAAAGAACGGTTCGAAACAGC 734
|.||||||.|| ||.|| |||..|||||||||||||||.||||.||.||.
BL00854___hsl 686 TTCCTGTCCGATTTACA-TGCAATTGTTCAAAAGAACGTTTCGCAAGAGG 734
BSNT_00124___ 735 CATTTTGGGACTAGGCAAAAAAGAAATTCAAGATATGATAGAAGAAGATG 784
|||..|.||.||.|||||..|.|||||||||.|.|||||.||.|||||||
BL00854___hsl 735 CATCATCGGTCTTGGCAAGGATGAAATTCAACAGATGATTGATGAAGATG 784
BSNT_00124___ 785 GACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACA 834
|.||||||||.||...||||||||||||.|||||||.|||..|.||||||
BL00854___hsl 785 GCCAAGCCGAGGCTCAATGCCATTTTTGCAATGAAACGTATCTGTTTACA 834
BSNT_00124___ 835 AAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAA 876
||.||||||||.||||.||||||.||..||| || |||
BL00854___hsl 835 AAGGAAGAGCTTGAAGCGCTTCGAGATGAAA-TA-----TAA 870
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