Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00124 and BL00854

See Amino acid alignment / Visit BSNT_00124 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence dna-align/BSNT_00124___hslO.1.5803.seq
#    -bsequence dna-align/BL00854___hslO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00124___hslO-BL00854___hslO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00124___hslO-BL00854___hslO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00124___hslO
# 2: BL00854___hslO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 892
# Identity:     661/892 (74.1%)
# Similarity:   661/892 (74.1%)
# Gaps:          38/892 ( 4.3%)
# Score: 2419.0
# 
#
#=======================================

BSNT_00124___      1 ATGGATTATTTAGTAAAAGCACTTGCGTATGACGGAAAAGTTCGGGCTTA     50
                     ||||||||||||||.|||||..||||.||||||||.|||||..||||.||
BL00854___hsl      1 ATGGATTATTTAGTGAAAGCCATTGCATATGACGGCAAAGTGAGGGCATA     50

BSNT_00124___     51 TGCGGCGAGAACGACTGATATGGTAAATGAGGGGCAGAGACGCCATGGTA    100
                     |||.||||..||.||.||.|.|.|..||||.|..||.|||.|.|||...|
BL00854___hsl     51 TGCAGCGAATACAACAGAAACGATTCATGAAGCCCAAAGAAGGCATAACA    100

BSNT_00124___    101 CGTGGCCGACAGCATCCGCTGCATTGGGCCGCACAATGACAGCTTCACTT    150
                     |.|||||.||.||.|||||.||.||.||..|.||.|||||.||..|..|.
BL00854___hsl    101 CATGGCCTACCGCTTCCGCCGCTTTAGGAAGAACGATGACGGCGGCTGTC    150

BSNT_00124___    151 ATGCTCGGCGCTATGCTGAAGGGCGATGATAAGCTGACCGTGAAAATCGA    200
                     |||||||||||.||||||||.|||||.||.|||||.|||||.||.||.||
BL00854___hsl    151 ATGCTCGGCGCCATGCTGAAAGGCGAAGACAAGCTCACCGTTAAGATTGA    200

BSNT_00124___    201 GGGCGGAGGTCCGATCGGAGCTATTGTAGCTGATGCCAATGCCAAAGGAG    250
                     .||.||.||.||||||||.||.|||||.|||||.|..|||||.|||||||
BL00854___hsl    201 AGGAGGCGGACCGATCGGCGCGATTGTCGCTGACGGAAATGCAAAAGGAG    250

BSNT_00124___    251 AAGTCAGAGCCTATGTCTCTAACCCGCAAGTTCATTTTGATTTAAATGAA    300
                     |.|||||.|..||.||.||.||.|||||.||||||||.||.|||||||||
BL00854___hsl    251 ACGTCAGGGGATACGTGTCCAATCCGCACGTTCATTTCGACTTAAATGAA    300

BSNT_00124___    301 CAAGGCAAGCTTGATGTCAGACGTGCGGTTGGAACAAACGGAACGTTAAG    350
                     ||.|||||.|||||.||||||.|.||.||.||.||....||||||.||||
BL00854___hsl    301 CACGGCAAACTTGACGTCAGAAGAGCCGTCGGTACGTCAGGAACGCTAAG    350

BSNT_00124___    351 TGTCGTAAAAGATTTAGGTTTGCGCGAGTTCTTCACAGGACAAGTAGAAA    400
                     .||.|||||||||.|.|||.|.|||||.||.||.|||||.||.||.||.|
BL00854___hsl    351 CGTAGTAAAAGATCTCGGTCTCCGCGATTTATTTACAGGCCAGGTTGAGA    400

BSNT_00124___    401 TCGTTTCAGGAGAATTAGGCGATGATTTCACTTACTATCTTGTATCATCT    450
                     |||||||.||||||.|.|||||.|||||.|||||.|||||.||.||.|||
BL00854___hsl    401 TCGTTTCCGGAGAAATCGGCGAGGATTTTACTTATTATCTCGTGTCCTCT    450

BSNT_00124___    451 GAGCAGGTTCCTTCATCAGTGGGCGTAGGTGTGCTCGTAAATCCTGACAA    500
                     ||.|||||||||||.||.|||||.|||||.||||||||.||.||.|||||
BL00854___hsl    451 GAACAGGTTCCTTCTTCGGTGGGTGTAGGGGTGCTCGTCAACCCCGACAA    500

BSNT_00124___    501 TACCATTCTTGCGGCAGGGGGCTTTATTATTCAGCTGATGCCGGGAACAG    550
                     |||.|||.|.||.|||||.||.|||||..|.||||||.||||||||||.|
BL00854___hsl    501 TACGATTTTAGCTGCAGGCGGATTTATCCTGCAGCTGCTGCCGGGAACGG    550

BSNT_00124___    551 ATGATGAAACAATCACAAAAATTGAA--CAGCGTCTATCTCAAGTAGAGC    598
                     |.||.|||||.|||||.||..|||||  .|.|  ||.||.|||||.||||
BL00854___hsl    551 ACGACGAAACCATCACGAAGCTTGAAACAAAC--CTTTCACAAGTGGAGC    598

BSNT_00124___    599 CGATTTCTAAGCTCATCCAAAAAGGGCTGACACCAGAAGAAATTTTAGAA    648
                     |.|||||.|||||.||.||.|||||..|||||||            .||.
BL00854___hsl    599 CAATTTCAAAGCTGATTCAGAAAGGTTTGACACC------------TGAG    636

BSNT_00124___    649 GAAGTCCTAGGC-----------GAGA--AACCTGAGATTTTGGAAACGA    685
                     |||||.|| |||           ||||  ||||.||..|..|||||||..
BL00854___hsl    637 GAAGTGCT-GGCTGCGGTATTGGGAGAAGAACCGGAAGTACTGGAAACCG    685

BSNT_00124___    686 TGCCTGTCAGA-TTCCATTGCCCTTGTTCAAAAGAACGGTTCGAAACAGC    734
                     |.||||||.|| ||.|| |||..|||||||||||||||.||||.||.||.
BL00854___hsl    686 TTCCTGTCCGATTTACA-TGCAATTGTTCAAAAGAACGTTTCGCAAGAGG    734

BSNT_00124___    735 CATTTTGGGACTAGGCAAAAAAGAAATTCAAGATATGATAGAAGAAGATG    784
                     |||..|.||.||.|||||..|.|||||||||.|.|||||.||.|||||||
BL00854___hsl    735 CATCATCGGTCTTGGCAAGGATGAAATTCAACAGATGATTGATGAAGATG    784

BSNT_00124___    785 GACAAGCCGAAGCAGTATGCCATTTTTGTAATGAAAAGTACTTATTTACA    834
                     |.||||||||.||...||||||||||||.|||||||.|||..|.||||||
BL00854___hsl    785 GCCAAGCCGAGGCTCAATGCCATTTTTGCAATGAAACGTATCTGTTTACA    834

BSNT_00124___    835 AAAGAAGAGCTGGAAGGGCTTCGTGACCAAACTACCCGCTAA    876
                     ||.||||||||.||||.||||||.||..||| ||     |||
BL00854___hsl    835 AAGGAAGAGCTTGAAGCGCTTCGAGATGAAA-TA-----TAA    870


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