Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00121 and BL00852
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence dna-align/BSNT_00121___ftsH.1.5803.seq
# -bsequence dna-align/BL00852___ftsH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00121___ftsH-BL00852___ftsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00121___ftsH-BL00852___ftsH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00121___ftsH
# 2: BL00852___ftsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1938
# Identity: 1577/1938 (81.4%)
# Similarity: 1577/1938 (81.4%)
# Gaps: 42/1938 ( 2.2%)
# Score: 6388.5
#
#
#=======================================
BSNT_00121___ 1 ATGAATCGGGTCTTCCGTAATACCATTTTTTATTTACTTATTTTATTAGT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BL00852___fts 1 ATGAATCGGGTCTTCCGTAATACCATTTTTTATTTACTTATTTTATTAGT 50
BSNT_00121___ 51 AGTAATCGGGGTTGTGAGCTACTTCCAGACCTCAAATCCGAAAACAGAAA 100
.||.|||||.|||||||||||||||||.|||.||||||||||||||||||
BL00852___fts 51 TGTGATCGGAGTTGTGAGCTACTTCCAAACCGCAAATCCGAAAACAGAAA 100
BSNT_00121___ 101 ATATGTCGTACAGT-AC---GTTCATCAAAAACCTGGATGACGGGAAAGT 146
|||||.||||.||| || ||| || ||||||.||..|||||||.||
BL00852___fts 101 ATATGACGTATAGTGACTTTGTT--TC--AAACCTAGAAAACGGGAAGGT 146
BSNT_00121___ 147 TGATAGCGTATCGGTTCAGCCTGTCAGAGGTGTTTATGAGGTAAAAGGGC 196
|||.|..||.||..|.|||||||||||.|||||.||.|||||....||||
BL00852___fts 147 TGAAAATGTCTCCATCCAGCCTGTCAGGGGTGTGTACGAGGTTCGGGGGC 196
BSNT_00121___ 197 AGCTGAAAAACTACGACAAAGATCAATACTTTTTGACTCATGTTCCTGAA 246
||||||..|.|||.||.||||||||.||.||..||||.||||||||||||
BL00852___fts 197 AGCTGACGACCTATGAAAAAGATCAGTATTTCCTGACCCATGTTCCTGAA 246
BSNT_00121___ 247 GGAAAGGGAGCAGACCAGAT-ATT--TAACGCTTTGAAAAAGAC--AGAC 291
|||||.||.|||||.||.|| ||| |.|.| |||||||.|| |||
BL00852___fts 247 GGAAAAGGGGCAGATCAAATCATTGATCAAG---TGAAAAAAACGAAGA- 292
BSNT_00121___ 292 GTAAAGGTTGAGCCCGCTCAAGAAACAAGCGGATGGGTGACGTTCCTGAC 341
||.|..|.||.||.||.||||||.|||..||||||.||||||||.|.||
BL00852___fts 293 -TACAAATAGAACCTGCGCAAGAAGCAAATGGATGGATGACGTTCTTTAC 341
BSNT_00121___ 342 GACCATCATCCCATTTGTCATTATCTTTATTCTGTTTTTCTTCCTGCTCA 391
.|||||||||||.|||||.||||||||.|||||.||.|||||||||||.|
BL00852___fts 342 CACCATCATCCCTTTTGTTATTATCTTCATTCTTTTCTTCTTCCTGCTTA 391
BSNT_00121___ 392 ATCAGGCTCAAGGTGGCGGCAGCCGTGTCATGAACTTTGGCAAGAGTAAA 441
|||||||||||||.||||||||||||||.|||||||||||.||.||.||.
BL00852___fts 392 ATCAGGCTCAAGGCGGCGGCAGCCGTGTTATGAACTTTGGAAAAAGCAAG 441
BSNT_00121___ 442 GCGAAGCTGTATACAGAGGAAAAGAAACGCGTCAAATTTAAAGACGTTGC 491
||||||||.||||||||.||||||||||||||||||||.|||||.||.||
BL00852___fts 442 GCGAAGCTCTATACAGAAGAAAAGAAACGCGTCAAATTCAAAGATGTGGC 491
BSNT_00121___ 492 AGGGGCTGACGAAGAAAAGCAAGAACTTGTTGAAGTTGTTGAGTTTCTGA 541
|||.||.||.||||||||||||||.|||||.|||||.|||||.||.||.|
BL00852___fts 492 AGGAGCGGATGAAGAAAAGCAAGAGCTTGTGGAAGTCGTTGATTTCCTCA 541
BSNT_00121___ 542 AAGATCCCCGCAAGTTTGCCGAGCTTGGCGCCAGAATACCGAAAGGCGTG 591
|.|||||||||||.|||||||||||.||.||.|||||.||||||||||||
BL00852___fts 542 AGGATCCCCGCAAATTTGCCGAGCTCGGTGCAAGAATTCCGAAAGGCGTG 591
BSNT_00121___ 592 CTTTTAGTCGGACCTCCGGGTACCGGTAAAACATTGCTTGCCAAGGCTTG 641
|||||.||||||||||||||||||||||||||||||||.||.||.||.||
BL00852___fts 592 CTTTTGGTCGGACCTCCGGGTACCGGTAAAACATTGCTGGCGAAAGCATG 641
BSNT_00121___ 642 TGCAGGTGAAGCCGGCGTACCTTTCTTCAGCATCAGCGGATCTGATTTCG 691
|||.||||||||.||.||.||||||||||||||||||||||||||.||||
BL00852___fts 642 TGCCGGTGAAGCAGGGGTGCCTTTCTTCAGCATCAGCGGATCTGACTTCG 691
BSNT_00121___ 692 TTGAAATGTTTGTAGGGGTCGGTGCTTCCCGTGTGCGTGACTTGTTTGAA 741
||||||||||.||.|||||.|||||.||.|||||.||.||||||||||||
BL00852___fts 692 TTGAAATGTTCGTCGGGGTTGGTGCATCACGTGTTCGCGACTTGTTTGAA 741
BSNT_00121___ 742 AATGCAAAAAAGAATGCGCCTTGTTTGATTTTCATTGATGAAATTGATGC 791
||.||.||.||.||||||||.|||.||||||||||.|||||.||||||||
BL00852___fts 742 AACGCCAAGAAAAATGCGCCGTGTCTGATTTTCATCGATGAGATTGATGC 791
BSNT_00121___ 792 AGTCGGACGCCAGCGTGGTGCTGGTCTCGGCGGTGGACACGATGAACGTG 841
.||||||||||||||.||.||.||.||.|||||.||.|||||||||||||
BL00852___fts 792 TGTCGGACGCCAGCGGGGAGCAGGCCTTGGCGGAGGTCACGATGAACGTG 841
BSNT_00121___ 842 AACAGACGCTAAACCAATTGCTTGTTGAAATGGACGGATTCAGCGCTAAT 891
||||||||||.|||||..|.||||||||||||||||||||||||||.|||
BL00852___fts 842 AACAGACGCTCAACCAGCTTCTTGTTGAAATGGACGGATTCAGCGCCAAT 891
BSNT_00121___ 892 GAAGGAATTATCATCATTGCTGCGACGAACCGTGCGGACATCTTGGACCC 941
||||||||.||||||||.||||||||.|||||.||.||.||.||.|||||
BL00852___fts 892 GAAGGAATCATCATCATCGCTGCGACAAACCGCGCCGATATTTTAGACCC 941
BSNT_00121___ 942 AGCCTTACTTCGTCCGGGACGTTTTGACCGTCAAATCACAGTGGACCGCC 991
.||.||.||.||.|||||||||||||||||||||||.||.||.|||||||
BL00852___fts 942 TGCATTGCTGCGCCCGGGACGTTTTGACCGTCAAATTACTGTTGACCGCC 991
BSNT_00121___ 992 CAGATGTCATTGGCCGTGAAGCTGTATTGAAAGTCCATGCGAGAAACAAA 1041
|.|||||||..|||||||||||||||.|..||||.||.||.||||||||.
BL00852___fts 992 CGGATGTCAAAGGCCGTGAAGCTGTACTTCAAGTACACGCAAGAAACAAG 1041
BSNT_00121___ 1042 CCGCTGGATGAAACGGTTAACCTAAAATCAATTGCCATGAGAACACCAGG 1091
||.||.||||||.|.||.|||||||||.|.||.||.|||.|.||.|||||
BL00852___fts 1042 CCTCTTGATGAATCCGTAAACCTAAAAGCGATCGCGATGCGGACGCCAGG 1091
BSNT_00121___ 1092 CTTCTCAGGCGCTGACTTAGAAAATCTCTTGAATGAAGCTGCGCTTGTAG 1141
.|||||.||.||.|||.|.|||||.||.||.||||||||.||.|||||.|
BL00852___fts 1092 GTTCTCGGGTGCAGACCTTGAAAACCTTTTAAATGAAGCGGCTCTTGTGG 1141
BSNT_00121___ 1142 CAGCTCGTCAAAACAAGAAAAAAATCGATGCGCGTGATATTGACGAAGCG 1191
|.||.||||||.|.||||||||.||||||..|||.||.||.||.||||||
BL00852___fts 1142 CGGCGCGTCAAGATAAGAAAAAGATCGATATGCGAGACATCGATGAAGCG 1191
BSNT_00121___ 1192 ACGGACCGTGTAATTGCCGGACCTGCTAAGAAGAGCCGCGTTATCTCCAA 1241
||.|||||.||.||.|||||||||||.|||||.|||.|.||.|||||.||
BL00852___fts 1192 ACAGACCGCGTCATCGCCGGACCTGCAAAGAAAAGCAGGGTGATCTCGAA 1241
BSNT_00121___ 1242 GAAAGAACGCAATATCGTGGCTTATCACGAAGGC-GGACACACCGTTATC 1290
.|||||||||||||||||||||||||||| |||| |||||||||||||||
BL00852___fts 1242 AAAAGAACGCAATATCGTGGCTTATCACG-AGGCGGGACACACCGTTATC 1290
BSNT_00121___ 1291 GGACTCGTTTTAGATGAGGCAGATATGGTTCATAAAGTAACGATTGTTCC 1340
|||||.||.||.||||||||.||||||||.|||||||||||||||||.||
BL00852___fts 1291 GGACTTGTCTTGGATGAGGCGGATATGGTGCATAAAGTAACGATTGTACC 1340
BSNT_00121___ 1341 TCGGGGCCAGGCTGGCGGTTATGCTGTTATGCTGCC-AAGAGAAGACCGT 1389
.||.|||||.||.|||||.|||||.||.|||||.|| ||| |||||||||
BL00852___fts 1341 GCGCGGCCAAGCAGGCGGATATGCCGTCATGCTTCCTAAG-GAAGACCGT 1389
BSNT_00121___ 1390 TATTTCCAAACAAAGCCGGAACTGCTTGATAAAATTGTCGGCCT-CTTGG 1438
|||||||||||.||.||.|||||.||.|||||.|||||||||.| ||| |
BL00852___fts 1390 TATTTCCAAACCAAACCCGAACTTCTCGATAAGATTGTCGGCTTGCTT-G 1438
BSNT_00121___ 1439 GCGGACGTGTTGCTGAAGAGATTATCTTCGGTGAAGTCAGCACAGGGGCG 1488
|.||.|||||.|||||.||.||.||||||||.||.||||||||.||.||.
BL00852___fts 1439 GAGGCCGTGTAGCTGAGGAAATCATCTTCGGCGAGGTCAGCACGGGCGCC 1488
BSNT_00121___ 1489 CACAATGACTTCCAGCGTGCGACGAATATTGCAAGACGAATGGTTACGGA 1538
||.||||||||||||||.||.||....|||||.|||||||||||.||.||
BL00852___fts 1489 CATAATGACTTCCAGCGCGCTACAGGCATTGCCAGACGAATGGTAACCGA 1538
BSNT_00121___ 1539 ATTCGGTATGTCAGAAAAACTGGGACCGTTGCAATTTGGACAGTCTCAGG 1588
||||||||||||.|||||.||.||.||..|.|||||.|||||.||.||.|
BL00852___fts 1539 ATTCGGTATGTCTGAAAAGCTCGGTCCTCTTCAATTCGGACAATCGCAAG 1588
BSNT_00121___ 1589 GCGGTCAGGTATTCTTAGGCCGTGATTTCAACAACGAACAGAACTACAGT 1638
||||.||.||||||||.||.||.|||||||||||.||.||.||||||||.
BL00852___fts 1589 GCGGGCAAGTATTCTTGGGTCGAGATTTCAACAATGACCAAAACTACAGC 1638
BSNT_00121___ 1639 GATCAAATCGCTTACGAAATTGATCAGGAAATTCAGCGCATCATCAAAGA 1688
||....||.||.||.|||||.|||.|.|||||.||||||.||||.||.||
BL00852___fts 1639 GACGCGATTGCGTATGAAATCGATAAAGAAATCCAGCGCTTCATTAAGGA 1688
BSNT_00121___ 1689 ATGTTATGAGCGTGCGAAACAAATCCTGACTGAAAATCGTGACAAGCTTG 1738
|||||||||.|||||.|||..||||||.|||||||||||.|||||.||||
BL00852___fts 1689 ATGTTATGAACGTGCAAAAACAATCCTTACTGAAAATCGCGACAAACTTG 1738
BSNT_00121___ 1739 AATTGATTGCCCAAACGCTTCTGAAAGTTGAAACGCTTGACGCTGAACAG 1788
|..||||.||.|||||..|.|||.|||||||||||||.||||||||.||.
BL00852___fts 1739 AGCTGATCGCTCAAACATTGCTGGAAGTTGAAACGCTCGACGCTGAGCAA 1788
BSNT_00121___ 1789 ATCAAACACCTTATC-GATCATGGAACATTACCTGAGCGTAATTTCTCAG 1837
|||||.|| .||.|| ||.||.||||.|.|.|||||.||.|..|.|||.|
BL00852___fts 1789 ATCAAGCA-TTTGTCTGAGCACGGAAGACTTCCTGATCGAACATACTCTG 1837
BSNT_00121___ 1838 ATGAT---GAAAAGAACGATGATGTGAAAGTAAACATTCTGACAA-AAAC 1883
||||| ||.||||..||||||||||||||.||||| ||| ||||
BL00852___fts 1838 ATGATCAGGAGAAGACAGATGATGTGAAAGTCAACAT-----CAATAAAC 1882
BSNT_00121___ 1884 -------AGAAGAAAAGAAAGACGATACGAAGGAGTAA 1914
.|||||.||.||.||.|||...||.||||||
BL00852___fts 1883 GAGATGACGAAGAGAAAAACGAGGATGAAAAAGAGTAA 1920
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