Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02504 and BL00851

See Amino acid alignment / Visit BSNT_02504 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence dna-align/BSNT_02504___mraZ.1.5803.seq
#    -bsequence dna-align/BL00851___mraZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02504___mraZ-BL00851___mraZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02504___mraZ-BL00851___mraZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02504___mraZ
# 2: BL00851___mraZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity:     366/465 (78.7%)
# Similarity:   366/465 (78.7%)
# Gaps:          18/465 ( 3.9%)
# Score: 1506.0
# 
#
#=======================================

BSNT_02504___      1 ------------------GTGGGGCAAGAGATCATGTTTATGGGTGAATA     32
                                       ||||||...|||||||||||||||||||||||
BL00851___mra      1 GTGAGTTGGGGAACGAAAGTGGGGGCCGAGATCATGTTTATGGGTGAATA     50

BSNT_02504___     33 TCAGCATACCATCGATGCGAAAGGCCGCATGATCGTACCCGCTAAATTTA     82
                     .||||||||.||.|||.|.|||||||||||||||||.||.||.|||||.|
BL00851___mra     51 CCAGCATACGATTGATTCAAAAGGCCGCATGATCGTTCCGGCGAAATTCA    100

BSNT_02504___     83 GAGAAGGCCTAGGTGAGCAATTTGTGCTGACTAGAGGACTTGACCAATGT    132
                     ||||||||||.||.|||||.||.||.|||||..|.||.|||||.||.||.
BL00851___mra    101 GAGAAGGCCTCGGCGAGCAGTTCGTTCTGACGCGCGGGCTTGATCAGTGC    150

BSNT_02504___    133 CTCTTCGGCTACCCTATGCACGAATGGAAACAAATTGAAGAAAAACTAAA    182
                     ||.||.||||||||.|||..|||||||||||..||.|||||||||||.||
BL00851___mra    151 CTGTTTGGCTACCCGATGTCCGAATGGAAACTCATCGAAGAAAAACTGAA    200

BSNT_02504___    183 AGCTCTGCCTCTCACAAAGAAAGATGCCCGCGCGTTTACCCGTTTCTTCT    232
                     .||.||.|||||.||.|||||||||||.|||||.||||||||.||.||.|
BL00851___mra    201 GGCCCTTCCTCTTACGAAGAAAGATGCACGCGCTTTTACCCGCTTTTTTT    250

BSNT_02504___    233 TTTCAGGGGCGACTGAATGCGAACTGGACAAGCAAGGCAGGGTAAATATC    282
                     |.||.||.||.||.|||||||||.||||||||||.|||.||.|.||.||.
BL00851___mra    251 TCTCCGGAGCCACCGAATGCGAATTGGACAAGCAGGGCCGGATCAACATT    300

BSNT_02504___    283 GCATCATCTCTATTGAATTACGCCAAACTGGAAAAAGAATGTGTTGTTAT    332
                     |||||..|.||.||.|||||.||.||.||.||.||.|||||.||.||.||
BL00851___mra    301 GCATCGCCGCTGTTAAATTATGCAAAGCTTGAGAAGGAATGCGTGGTCAT    350

BSNT_02504___    333 CGGGGTTTCTAATCGAATTGAATTGTGGAGTAAAGTAATTTGGGAACAAT    382
                     |||.|||||.||||||||||||||||||||.||||..|||||||||||||
BL00851___mra    351 CGGAGTTTCAAATCGAATTGAATTGTGGAGCAAAGAGATTTGGGAACAAT    400

BSNT_02504___    383 ACACAGAAGAGCAAGAAGATTCATTTGCTGAAATTGCTGAAAACATGATT    432
                     ||..|||||||||.||||||||||||||.|||||.||||||||||||||.
BL00851___mra    401 ACGTAGAAGAGCAGGAAGATTCATTTGCCGAAATAGCTGAAAACATGATC    450

BSNT_02504___    433 GGGTTTGATATATAA    447
                     ||.||||||||||||
BL00851___mra    451 GGATTTGATATATAA    465


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.