Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01042 and BL00848

See Amino acid alignment / Visit BSNT_01042 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence dna-align/BSNT_01042___tatAY.1.5803.seq
#    -bsequence dna-align/BL00848___tatAY.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01042___tatAY-BL00848___tatAY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01042___tatAY-BL00848___tatAY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01042___tatAY
# 2: BL00848___tatAY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity:     129/185 (69.7%)
# Similarity:   129/185 (69.7%)
# Gaps:          16/185 ( 8.6%)
# Score: 420.0
# 
#
#=======================================

BSNT_01042___      1 ATGC---CGATCGGTCCTGGAAGCCTTGCTGTTA----TCGCAATCGTTG     43
                     ||||   |.|||||||||||||| |||..|.|||    |||   |.||.|
BL00848___tat      1 ATGCCAACAATCGGTCCTGGAAG-CTTTATTTTAATTGTCG---TGGTGG     46

BSNT_01042___     44 CTCTGATTATCTTCGGTCCCAAAAAGCTGCCTGAATTGGGGAAAGCAGCG     93
                     |.||..|.||.|||||.||.|||||.||.||.||..||||.|.|||.|||
BL00848___tat     47 CGCTTTTGATATTCGGCCCGAAAAAACTTCCCGAGCTGGGAAGAGCGGCG     96

BSNT_01042___     94 GGAGACACACTTCGTGAATTCAAAAACGCTACTAAAGGAT----TAACGA    139
                     |||.||||.||.||.||.||.|||||.||.||.|||||.|    |.||||
BL00848___tat     97 GGAAACACGCTGCGGGAGTTTAAAAATGCGACAAAAGGTTTGGCTGACGA    146

BSNT_01042___    140 GTGATGAAGAGGAAAAAAAGAAAGAAGATCAGTAA    174
                      .|||...||..|.||||||||||||||||||||.
BL00848___tat    147 -CGATTCCGATAATAAAAAGAAAGAAGATCAGTAG    180


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