Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01042 and BL00848
See
Amino acid alignment /
Visit
BSNT_01042 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence dna-align/BSNT_01042___tatAY.1.5803.seq
# -bsequence dna-align/BL00848___tatAY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01042___tatAY-BL00848___tatAY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01042___tatAY-BL00848___tatAY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01042___tatAY
# 2: BL00848___tatAY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 129/185 (69.7%)
# Similarity: 129/185 (69.7%)
# Gaps: 16/185 ( 8.6%)
# Score: 420.0
#
#
#=======================================
BSNT_01042___ 1 ATGC---CGATCGGTCCTGGAAGCCTTGCTGTTA----TCGCAATCGTTG 43
|||| |.|||||||||||||| |||..|.||| ||| |.||.|
BL00848___tat 1 ATGCCAACAATCGGTCCTGGAAG-CTTTATTTTAATTGTCG---TGGTGG 46
BSNT_01042___ 44 CTCTGATTATCTTCGGTCCCAAAAAGCTGCCTGAATTGGGGAAAGCAGCG 93
|.||..|.||.|||||.||.|||||.||.||.||..||||.|.|||.|||
BL00848___tat 47 CGCTTTTGATATTCGGCCCGAAAAAACTTCCCGAGCTGGGAAGAGCGGCG 96
BSNT_01042___ 94 GGAGACACACTTCGTGAATTCAAAAACGCTACTAAAGGAT----TAACGA 139
|||.||||.||.||.||.||.|||||.||.||.|||||.| |.||||
BL00848___tat 97 GGAAACACGCTGCGGGAGTTTAAAAATGCGACAAAAGGTTTGGCTGACGA 146
BSNT_01042___ 140 GTGATGAAGAGGAAAAAAAGAAAGAAGATCAGTAA 174
.|||...||..|.||||||||||||||||||||.
BL00848___tat 147 -CGATTCCGATAATAAAAAGAAAGAAGATCAGTAG 180
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.