Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01036 and BL00845
See
Amino acid alignment /
Visit
BSNT_01036 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence dna-align/BSNT_01036___gcp.1.5803.seq
# -bsequence dna-align/BL00845___gcp.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01036___gcp-BL00845___gcp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01036___gcp-BL00845___gcp.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01036___gcp
# 2: BL00845___gcp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1056
# Identity: 789/1056 (74.7%)
# Similarity: 789/1056 (74.7%)
# Gaps: 45/1056 ( 4.3%)
# Score: 2928.0
#
#
#=======================================
BSNT_01036___ 1 ATGAGTGAGCAAAAAGACATGTACGTATTAGGAATTGAAACAAGCTGTGA 50
||||.|.|..|||||||..||||.|||||||||||.||||||||||||||
BL00845___gcp 1 ATGAATCATAAAAAAGATCTGTATGTATTAGGAATCGAAACAAGCTGTGA 50
BSNT_01036___ 51 TGAGACTGCTGCAGCTATTGTGAAAAACGGGAAAGAGATCATTTCAAACG 100
|||||||||.||.||.|||||.||||||||||..||.|||||.|||||.|
BL00845___gcp 51 TGAGACTGCCGCTGCGATTGTCAAAAACGGGACGGACATCATCTCAAATG 100
BSNT_01036___ 101 TAGTAGCCTCTCAAATTGAAAGCCATAAGCGCTTCGGAGGCGTTGTTCCG 150
|.|||||.||.|||||.||.||.|||||.||.||.||.|||||.|||||.
BL00845___gcp 101 TCGTAGCGTCGCAAATCGAGAGTCATAAACGGTTTGGGGGCGTCGTTCCC 150
BSNT_01036___ 151 GAAATTGCTTCAAGACATCATGTTGAACAAATCACTTTGGTTATAGAAGA 200
||.||.||.|||||.|||||.||.|||||.|||||..|.||..|.||.||
BL00845___gcp 151 GAGATCGCATCAAGGCATCACGTGGAACAGATCACGATCGTGCTTGAGGA 200
BSNT_01036___ 201 GGCGTTTCGCA-AAGCTGGCATGACGTATAGTGATATTGATGCGATTGCA 249
.||.||| ||| ||||.|.||||||||.|..|||.||||||||.||||||
BL00845___gcp 201 AGCCTTT-GCACAAGCGGACATGACGTTTGATGACATTGATGCCATTGCA 249
BSNT_01036___ 250 GTAACAGAAGGTCCGGGACTGGTGGGGGCGCTTCTTATTGGAGTGAATGC 299
|||||.|||||.|||||.||.||.||.||.||..|.||.||.||||||||
BL00845___gcp 250 GTAACGGAAGGACCGGGGCTTGTAGGCGCTCTATTGATCGGCGTGAATGC 299
BSNT_01036___ 300 CGCTAAAGCATTGAGCTTTGCACATAACATTCCGTTAGTAGGCGTTCATC 349
.||.|||||..|.||.|||||.|....|||.|||.|.||||||||.||||
BL00845___gcp 300 TGCGAAAGCGCTCAGTTTTGCCCGGGGCATACCGCTCGTAGGCGTGCATC 349
BSNT_01036___ 350 ATATAGCCGGTCATATATACGCGAACCGTCTTGTAGAAGACATCGTGTTC 399
||||.||||||||.||.||.||.|||.|.|||||..|.|||||....||.
BL00845___gcp 350 ATATTGCCGGTCACATCTATGCCAACAGGCTTGTTCAGGACATTCAATTT 399
BSNT_01036___ 400 CCGGC-ACTGGCATTGGTCGTTTCAGGAGGCCATACAGAACTGGTTTATA 448
||||| |.||.|.|| |||||.|||||.|||||.||.|||||.||.||||
BL00845___gcp 400 CCGGCGATTGCCCTT-GTCGTCTCAGGCGGCCACACCGAACTCGTATATA 448
BSNT_01036___ 449 TGAAGGAACATGGATCATTTGAAGTCATTGGGGAAACCCTTGATGATGCG 498
||||.||.||.||.|||||||||||.||.||.||.||.||.||.|||||.
BL00845___gcp 449 TGAAAGAGCACGGCTCATTTGAAGTAATCGGAGAGACGCTCGACGATGCT 498
BSNT_01036___ 499 GCAGGAGAAGCCTACGACAAAGTGGCGCGGACGATGGGATTGCCATATCC 548
|||||.||||||||.||||||||||||.|.||||||||..|.||.|||||
BL00845___gcp 499 GCAGGCGAAGCCTATGACAAAGTGGCGAGAACGATGGGGCTTCCTTATCC 548
BSNT_01036___ 549 GGGTGGACCGCAAATTGACAAGCTAGCTGAAAAAGGGAATGACAATATTC 598
|||||||||.||.||||||||.||.||..|||||||..|.|..|||.|.|
BL00845___gcp 549 GGGTGGACCTCACATTGACAAACTTGCGCAAAAAGGCGAGGCAAATGTGC 598
BSNT_01036___ 599 CGCTTCCTCGCGCATGGCTTGAAGAAGGCTCTTACAACTTCAGCTTTAGC 648
||||.||.||||||||||||||||||||.|||||..|.||||||||.|||
BL00845___gcp 599 CGCTGCCGCGCGCATGGCTTGAAGAAGGGTCTTATCATTTCAGCTTCAGC 648
BSNT_01036___ 649 GGATTGAAGTCTGCGGTGATCAATACGCTTCATAATGCATCCCAAAAAGG 698
||||||||||||||.||.|||||.||||||||.||.||.||.||||||||
BL00845___gcp 649 GGATTGAAGTCTGCAGTCATCAACACGCTTCACAACGCTTCACAAAAAGG 698
BSNT_01036___ 699 GCAAGAGATTGCTCCGGAAGATTTGTCTGCCAGTTTCCAAAATAGTGTGA 748
..||..|||.|||||||||||||||||.|||||.||.||..|.||.||.|
BL00845___gcp 699 CGAAACGATAGCTCCGGAAGATTTGTCAGCCAGCTTTCAGGAAAGCGTCA 748
BSNT_01036___ 749 TCGATGTCTTGGTAACCAAAACGGCGCGCGCGGCAAAGGAA---TATGAT 795
|.||||||.|.||.||.|||||||..|||||.|| |||| ||||..
BL00845___gcp 749 TAGATGTCCTCGTGACAAAAACGGAACGCGCTGC---GGAAGCTTATGGC 795
BSNT_01036___ 796 GTCAAACAGGTCCTTTTAGCCGGAGGAGTAGCTGCAAACAGAGGCCTCAG 845
|||||||||||.||..|.|||||||||||.||||||||||.|||.||.||
BL00845___gcp 796 GTCAAACAGGTGCTGCTTGCCGGAGGAGTTGCTGCAAACAAAGGGCTGAG 845
BSNT_01036___ 846 AGCTGCATTAGAAAAGGAA--TTTGCCCAGCA----TGAAGGGATTACGC 889
|||.||..|.||||| || || ||||| |...|.|||...||
BL00845___gcp 846 AGCCGCGCTCGAAAA--AACGTT----CAGCAGCCGTCCGGAGATCGAGC 889
BSNT_01036___ 890 TTGTCATTCCTCCATTAGCT----TTATGCACGGATAATGCTGCGATGAT 935
||.|.||.||.|| ||| .|.||.|||||.|||||.||.|||||
BL00845___gcp 890 TTTTGATCCCGCC----GCTCTCGCTGTGTACGGACAATGCCGCCATGAT 935
BSNT_01036___ 936 TGCTGCTGCTGGTACAATTGCTTTTGAAAAAGGAATTCGCGGTGCATATG 985
|||.||.||.|||||..|||||||||||||||||||..|.||...|||||
BL00845___gcp 936 TGCCGCCGCAGGTACGGTTGCTTTTGAAAAAGGAATCAGAGGAAAATATG 985
BSNT_01036___ 986 ATATGAATGGCCAGCCCGGCCTTGAATTGACTTCTTATCAAAGTCTCACG 1035
||||||||||.|||||.|||.|.||..||||.||||||..|
BL00845___gcp 986 ATATGAATGGTCAGCCTGGCTTAGATCTGACGTCTTATTGA--------- 1026
BSNT_01036___ 1036 AGATAA 1041
BL00845___gcp 1026 ------ 1026
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.