Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01032 and BL00843
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence dna-align/BSNT_01032___ydiC.1.5803.seq
# -bsequence dna-align/BL00843___ydiC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01032___ydiC-BL00843___ydiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01032___ydiC-BL00843___ydiC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01032___ydiC
# 2: BL00843___ydiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 746
# Identity: 466/746 (62.5%)
# Similarity: 466/746 (62.5%)
# Gaps: 112/746 (15.0%)
# Score: 1336.0
#
#
#=======================================
BSNT_01032___ 1 ATGACAATATTAGCAATTGATACATCAAATTATACATTGGGCATTGCGCT 50
|||||.|||.|.||.|||||||||||.||||..||
BL00843___ydi 1 ATGACGATACTTGCGATTGATACATCCAATTTAAC--------------- 35
BSNT_01032___ 51 GCTTCGAG------------AAGAC---ACTGTTATAGC--AGAATACAT 83
|||..||| ||||| |..||.||||| ||.|||.||
BL00843___ydi 36 GCTCGGAGTGGCATTAATCAAAGACGGAAAAGTGATAGCCGAGCATATAT 85
BSNT_01032___ 84 TACATATTTGAAAAAGAACCACTCTGTAAGAGCGATGCCTGCTGTTCATT 133
|..|.||.||.||.|||||.||.||.|||||.|||||.| ||.|
BL00843___ydi 86 --CCCACTTAAAGAAAAACCATTCGGTCAGAGCCATGCCGG-----CAAT 128
BSNT_01032___ 134 C-----ATTGCTGAATGATTGTGATATGGCACCGC--AG-GACCTTTCTA 175
| |.|.||.||.||.||.|.|.| |..|| || |||||..|..
BL00843___ydi 129 CGACGAACTCCTTAAAGAGTGCGGTTT---AAAGCCTAGTGACCTGACCC 175
BSNT_01032___ 176 AAATTGTCGTTGCAAAAGGCCCAGGTTCATACACAGGAGTAAGAATAGGT 225
||||||..|||||.||||||||.||||||||.|||||.||..|.||.||.
BL00843___ydi 176 AAATTGCAGTTGCCAAAGGCCCGGGTTCATATACAGGCGTGCGGATCGGC 225
BSNT_01032___ 226 GTGACGTTGGCCAAAACACTTGCCTGGTCTTTAGACATTCC----AATAA 271
||||||.|.||||||||.|||||.|||||.|||.|.||||| ||.|
BL00843___ydi 226 GTGACGATTGCCAAAACGCTTGCATGGTCATTAAATATTCCGGTTAAAA- 274
BSNT_01032___ 272 GTGCTGTATCAAGTCTTGAGACGCTTGCGGCAAATGGCCGGCATTTTGAC 321
|.||.|||||.|||||...||||||||||||.|||||...|||..|.
BL00843___ydi 275 ---CCGTTTCAAGCCTTGAAGTGCTTGCGGCAAACGGCCGTTTTTTCCAA 321
BSNT_01032___ 322 GGTCTGATCAGCCCAATCTTTGATGCTAGACGGGGACAGGTGTACACAGG 371
||..||||..|.||..|.|||||||||||.||.||.|||||.||.||.||
BL00843___ydi 322 GGCTTGATTTGTCCGTTGTTTGATGCTAGGCGCGGTCAGGTTTATACGGG 371
BSNT_01032___ 372 TCTGTATCAATATA--------AAA----ATGGGCTTTTAGAGCAAGTTG 409
.|||||.||.|||| ||| ||||..|...||||.|
BL00843___ydi 372 ACTGTACCAGTATAGGGACGGCAAACTCCATGGATTGGAAGAGGA----- 416
BSNT_01032___ 410 TTCCAGATCAAAATGTGATGCTGGCAGATTGGCTGGAGATGCTAAAAGAA 459
|||||.|| |..||||.|.|||||||||..|.|.|||.||||..
BL00843___ydi 417 --CCAGAACA-----TTCTGCTTGAAGATTGGCTAAAAAAGCTGAAAGCC 459
BSNT_01032___ 460 AAGGGGC-----GTCCTGTTTTGTTTT--TAGGTCACGACACTTCTATTC 502
|.||..| |||| |||| ||||...||||||....||||
BL00843___ydi 460 ATGGATCAGCAAGTCC-------TTTTCATAGGAAGCGACACCGGGATTC 502
BSNT_01032___ 503 ACAAGCAGATGAT--AAAGGATGTTCTTAGAACAAAAGGATTCATTG--G 548
|||.|.|.||||| ||.||||..||...||||||..|| |.|||| |
BL00843___ydi 503 ACAGGGAAATGATCGAACGGATTCTCGATGAACAAGCGG--TTATTGCAG 550
BSNT_01032___ 549 AACTGCTGCCCAGCATAACCCGCGTCCTTCAGAATTGGCTTTTCTCGG-G 597
|.| ||||||.|||....||..|.|||||||||||||||||..|||| |
BL00843___ydi 551 ACC--CTGCCCTGCAGCTTCCAAGACCTTCAGAATTGGCTTTAATCGGAG 598
BSNT_01032___ 598 AA--GGAAAAGGAAGCAGCTGATGTTCATGGGC-TTGTCCCGGATTACTT 644
|| ..||.||||.| |||...||..|| || ||||.||..|.||..|
BL00843___ydi 599 AACTTAAAGAGGACG-AGCCAGTGCACA---GCATTGTTCCAAACTATAT 644
BSNT_01032___ 645 GCGGCTGGCAGAAGCTGAAGCGAAATGGATTGAAAGTCAAAAGTAG 690
.||.|||||.|||||.||.||....|||.||||||..||||||||.
BL00843___ydi 645 TCGTCTGGCCGAAGCCGAGGCCGTCTGGCTTGAAAAACAAAAGTAA 690
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