Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01031 and BL00842
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence dna-align/BSNT_01031___ydiB.1.5803.seq
# -bsequence dna-align/BL00842___ydiB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01031___ydiB-BL00842___ydiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01031___ydiB-BL00842___ydiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01031___ydiB
# 2: BL00842___ydiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 482
# Identity: 354/482 (73.4%)
# Similarity: 354/482 (73.4%)
# Gaps: 10/482 ( 2.1%)
# Score: 1236.0
#
#
#=======================================
BSNT_01031___ 1 GTGAAGCAA--TTAAAATGGAGAACTGTAAATCCAGAAGAAACAAAAGCA 48
||||| || |||.|.||||.|||...|.|.||.|||||.||||||...
BL00842___ydi 1 GTGAA--AACGTTAGAGTGGAAAACGACAGAGCCTGAAGAGACAAAAAAC 48
BSNT_01031___ 49 ATTGCCAAGCTTGCGGCAGCGTTTGCTAAACCGGGAGACGTCCTGACATT 98
|||||||.|||.||||||...|.||.|.|.||.||.||.|||.|.|||||
BL00842___ydi 49 ATTGCCAGGCTGGCGGCAAAATATGTTCAGCCCGGTGATGTCATCACATT 98
BSNT_01031___ 99 AGAGGGCGATTTAGGTGCAGGAAAAACGACTTTTACGAAAGGTTTTGCAG 148
.|||||||||.|.||.|||||.||||||||||||||||||||.|||||.|
BL00842___ydi 99 GGAGGGCGATCTTGGAGCAGGCAAAACGACTTTTACGAAAGGGTTTGCCG 148
BSNT_01031___ 149 AAGGGCTGGGAATTACACGTATTGTAAACAGTCCGACTTTTACAATTATA 198
|||||.|.||.||.|..||..||||.|.|||.|||||||||||.||.||.
BL00842___ydi 149 AAGGGATCGGCATCAAGCGGGTTGTCAGCAGCCCGACTTTTACCATCATC 198
BSNT_01031___ 199 AAAGAATATAACGATGGCGTACTTCCTCTTTATCACATGGATGTGTATAG 248
||||||||....||.|||...|||||.||.|.|||.|||||||||||.||
BL00842___ydi 199 AAAGAATACCGTGACGGCTCTCTTCCGCTGTTTCATATGGATGTGTACAG 248
BSNT_01031___ 249 AATGGAAGATGAAAGTGAAGATTTGGGACTTGATGAATATTTTCACGGAC 298
.||||||||.||.|..||||||.|.|||.|.||||||||||||.|.|||.
BL00842___ydi 249 GATGGAAGACGAGACGGAAGATCTCGGATTAGATGAATATTTTGAGGGAG 298
BSNT_01031___ 299 AAGGTGTCTGTCTCGTTGAATGGGCTCATTTAATTGAAGAACAGCTGCCA 348
|.||.|||||.||.||.||||||||.|||||.||||||||.|||||.|||
BL00842___ydi 299 ACGGCGTCTGCCTTGTGGAATGGGCGCATTTGATTGAAGAGCAGCTTCCA 348
BSNT_01031___ 349 CAGGAGCGACTGCAAATTGTCATCAAAAGAGC-TGGTGATGATGAGCGGG 397
.|.||.||.||..|..|.|||||.||..| || |||||||||..||| |
BL00842___ydi 349 AAAGAACGCCTTGAGGTGGTCATTAAGCG-GCTTGGTGATGACAAGC--G 395
BSNT_01031___ 398 AAA--TTACCTTTACTGCTGTCGGGAATCGGTATGAAATGCTTTGTGAGG 445
||| |.||||||||..||...||.|..||.||.||||..|||||.||||
BL00842___ydi 396 AAAGCTGACCTTTACACCTAAAGGCAGGCGCTACGAAAATCTTTGCGAGG 445
BSNT_01031___ 446 AGTTAAGTAGACATGACAATATTAGCAATTGA 477
||.|.||.|.|||||||.|||.|.||.|||||
BL00842___ydi 446 AGATCAGCAAACATGACGATACTTGCGATTGA 477
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