Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04951 and BL00835
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:08
# Commandline: needle
# -asequence dna-align/BSNT_04951.1.5803.seq
# -bsequence dna-align/BL00835.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04951-BL00835.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04951-BL00835.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04951
# 2: BL00835
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 114/203 (56.2%)
# Similarity: 114/203 (56.2%)
# Gaps: 55/203 (27.1%)
# Score: 337.0
#
#
#=======================================
BSNT_04951 1 -------------ATGA---------TCAGAAA-------AAAA---CTC 18
|||| |.||||| |||| |.|
BL00835 1 GTGAGTCTGCACGATGAAAAAGAGATTGAGAAATTGCTGGAAAATTTCAC 50
BSNT_04951 19 AGCAATACGTCCTATCA----------AGAAAGAGAAGATTTAGAGCAAG 58
|.|.|| .|||| |||.||.||.|||.|.||.||.|
BL00835 51 ACCGAT------GATCAAAAGCAAATTAGAGAGGGAGGATCTTGAACAGG 94
BSNT_04951 59 AGCTGAAGATCAAAATGTTTGAAAAGGCTGATATGCTTTTGTGTCAGGAT 108
||||||||||.||.||.|..|||||.||.||.||||||||.|||||.||.
BL00835 95 AGCTGAAGATGAAGATTTGCGAAAAAGCGGAGATGCTTTTATGTCAAGAA 144
BSNT_04951 109 GTCCCGGGATTTTGGGAGTTTATTTTGTACATGGTAGATGAGAACTC--A 156
||.||.||.|||||||||||||| .|||...|.|.||| ||.|| .
BL00835 145 GTGCCTGGTTTTTGGGAGTTTAT----AACAGAATTGCTGA-AAGTCCTT 189
BSNT_04951 157 TAA 159
|||
BL00835 190 TAA 192
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