Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05006 and BL00833
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:12
# Commandline: needle
# -asequence dna-align/BSNT_05006.1.5803.seq
# -bsequence dna-align/BL00833___yvaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05006-BL00833___yvaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05006-BL00833___yvaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05006
# 2: BL00833___yvaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 643
# Identity: 361/643 (56.1%)
# Similarity: 361/643 (56.1%)
# Gaps: 179/643 (27.8%)
# Score: 1328.0
#
#
#=======================================
BSNT_05006 0 -------------------------------------------------- 0
BL00833___yva 1 ATGACAAAAACCCTTTACATTACCGCTCACCCGCATGACGAAAGGGCATC 50
BSNT_05006 0 -------------------------------------------------- 0
BL00833___yva 51 CTACAGCATGGCGGCAGGAAAAGCGTTTATCGAATCTTACAAAGAAGCTC 100
BSNT_05006 0 -------------------------------------------------- 0
BL00833___yva 101 ATCCGGATGACGAAGTCATACACCTTGATCTTTATCGGGAAAACATTCCG 150
BSNT_05006 1 -------------ATGTATTTAGCG--TGGGGAAAGCTTCAGTCAGGTAC 35
||||.||.|||| ||||||||..|.|||||.||..|
BL00833___yva 151 CAGATTGATGCGGATGTTTTCAGCGGCTGGGGAAAATTGCAGTCGGGGTC 200
BSNT_05006 36 AGGCTTTGAAGAGCTTTCTGAAAGCGAAAAAGCGAAAGTAGGCCGTTTGG 85
.|||||||||.|||||||||||..|||||||||.|||||.|||||||||.
BL00833___yva 201 GGGCTTTGAACAGCTTTCTGAACACGAAAAAGCTAAAGTCGGCCGTTTGA 250
BSNT_05006 86 GAGAGCTTAGCGATCAATTTGCATCAGC---TGATAAGTACGTATTTGTT 132
..|||||.|||||.|||||| ||| || .||.||.|||||.|||||.
BL00833___yva 251 ATGAGCTGAGCGAGCAATTT--ATC-GCGGGAGACAAATACGTGTTTGTC 297
BSNT_05006 133 ACTCCTTTATGGAACTTCTCATTCCCGCCAGTGATGAAAGCGTATCTCGA 182
||.||..|.|||||.|||||.||.|||||.||||||||||||||..||||
BL00833___yva 298 ACGCCGCTTTGGAATTTCTCTTTTCCGCCGGTGATGAAAGCGTACTTCGA 347
BSNT_05006 183 TTCTGTTGCTGTTGCAGGAAAATCATTCAAATACACAGAACAAGGCCCTA 232
|.|.||.|||||.||.|||||..|.||.|||||.||.|||||.||.||.|
BL00833___yva 348 TGCGGTCGCTGTAGCGGGAAAGACGTTTAAATATACCGAACAGGGACCGA 397
BSNT_05006 233 TTGGCTTGTTGACTGATAAAAAAGCAATTCATATCCAAGCGCGCGGCGGC 282
|.||..||||.||.|||||||||||..|.||.|||||.|||.|.||||||
BL00833___yva 398 TCGGGCTGTTAACCGATAAAAAAGCGCTGCACATCCAGGCGAGAGGCGGC 447
BSNT_05006 283 TACTATTCAGAAGGCCCTGCGGCTGAGATGGAAATGGGGCACCGCTACAT 332
||||||||||||||.|..||.||.||..|.||.||||||||||||||.||
BL00833___yva 448 TACTATTCAGAAGGGCAGGCTGCGGAACTTGAGATGGGGCACCGCTATAT 497
BSNT_05006 333 CGGCATCATGATGAACTTCTTCGGCGTACCATCATTCGAAGGCATTTTCG 382
|.|||||||||||.|.||.|||||.||.||...|||.|||||..|.||..
BL00833___yva 498 CAGCATCATGATGCAGTTTTTCGGGGTTCCGGAATTTGAAGGTTTATTTA 547
BSNT_05006 383 TAGAGGGACATAATGCGGAGCCTGATAAAGCACAGCAAATCAAAGAAGAC 432
||||.||.||||||||.||||||||||||||..|..||||.|||.||.|.
BL00833___yva 548 TAGAAGGGCATAATGCTGAGCCTGATAAAGCTGAAGAAATAAAACAAAAT 597
BSNT_05006 433 GCGATTGCGCGTGCGAAAGAA----GCAGGAAAAACATTCTAA 471
|||||||..||.||.|||||| ||||| ||.||.|.|
BL00833___yva 598 GCGATTGTCCGAGCCAAAGAATTGGGCAGG----ACTTTTTGA 636
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