Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04956 and BL00821
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:08
# Commandline: needle
# -asequence dna-align/BSNT_04956___oxdC.1.5803.seq
# -bsequence dna-align/BL00821___oxdC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04956___oxdC-BL00821___oxdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04956___oxdC-BL00821___oxdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04956___oxdC
# 2: BL00821___oxdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1183
# Identity: 879/1183 (74.3%)
# Similarity: 879/1183 (74.3%)
# Gaps: 53/1183 ( 4.5%)
# Score: 3129.0
#
#
#=======================================
BSNT_04956___ 1 ATG--AAAAAACAAAATGACATTCCGCAGCCAATTAGAGGAGACAAAGGA 48
||| |||||||||| .|.|||||.|||||.||.||||||||.||||||
BL00821___oxd 1 ATGGAAAAAAACAAA--CAAATTCCACAGCCGATCAGAGGAGAAAAAGGA 48
BSNT_04956___ 49 GC---AACGGTAAAAATCCCGCGCAATATTGAAAGAGACCGGCAAAACCC 95
|| |||| |||||.||||.|||..||||..|.|||||.||||||||
BL00821___oxd 49 GCGGAAACG---AAAATTCCGCACAACGTTGAGCGCGACCGCCAAAACCC 95
BSNT_04956___ 96 TGATATGCTCGTTCCGCCTGAAACCGATCATGGCACCGTCAGC--AATAT 143
.||.||||||||.||||||||||||||.||.||.||.|| || ||.||
BL00821___oxd 96 GGACATGCTCGTACCGCCTGAAACCGACCACGGAACGGT--GCCAAACAT 143
BSNT_04956___ 144 GAAGTTTTCGTTCTCTGATACTCATAACCGATTAGAAAAAGGCGGATATG 193
|||.|||||.||.||.|||...||||||||..|.||||||||||||||||
BL00821___oxd 144 GAAATTTTCATTTTCCGATGTCCATAACCGTCTTGAAAAAGGCGGATATG 193
BSNT_04956___ 194 CCCGTGAAGTGACAGTACGTGAATTGCCGATTTCAGAAAACCTTGCATCC 243
|.||.|||||.|||||.||.||..|||||||||||||.||.|||||.||.
BL00821___oxd 194 CACGGGAAGTCACAGTTCGCGAGCTGCCGATTTCAGACAAGCTTGCTTCT 243
BSNT_04956___ 244 GTAAATATGCGGCTGAAGCCAGGTGCGATTCGCGAGCTTCACTGGCATAA 293
||.||.|||.|||||||.||.||.||.||..|.|||||.|||||||||||
BL00821___oxd 244 GTCAACATGAGGCTGAAACCTGGGGCCATCAGGGAGCTGCACTGGCATAA 293
BSNT_04956___ 294 AGAAGCTGAATGGGCTTATATGATTTACGGAAGTGCAAGAGTCACAATTG 343
.|||||.||||||||.||||||.|.|||||||..|||.|..|.||...||
BL00821___oxd 294 GGAAGCCGAATGGGCGTATATGCTGTACGGAAAAGCACGGATTACGTCTG 343
BSNT_04956___ 344 TAGATGAAAAAGGGCGCAGCTTTATTGACGATGTAGGTGAAGGAGACCTT 393
|.||..||.|.||..|.|.|||||||||.|||||....||||||||.||.
BL00821___oxd 344 TTGACCAAGACGGCAGAAACTTTATTGAAGATGTGAAAGAAGGAGATCTC 393
BSNT_04956___ 394 TGGTACTTCCCGTCAGGCCTGCCGCACTCCATCCAAGCGCTGGAGGAGGG 443
|||||||||||||||||.||||||||.||.||.|||||.||.||.||.||
BL00821___oxd 394 TGGTACTTCCCGTCAGGTCTGCCGCATTCAATTCAAGCACTTGAAGACGG 443
BSNT_04956___ 444 A-GCTGAGTTCCTGCTCGTATTTGACGATGGATCATTCTCTGAAAACAGC 492
| || ||.||||||||.||.||.||.||.||.||.|||||||||||||||
BL00821___oxd 444 ATGC-GAATTCCTGCTTGTCTTCGATGACGGCTCCTTCTCTGAAAACAGC 492
BSNT_04956___ 493 ACGTTCCAGCTGACAGATTGGCTGGCCCACACTCCAAAAGAAGTCATTGC 542
||.||||||.|||||||||||||||||||.||.||..|.||.||.|||||
BL00821___oxd 493 ACCTTCCAGGTGACAGATTGGCTGGCCCATACGCCTGATGAGGTGATTGC 542
BSNT_04956___ 543 TGCGAACTTTGGCGTGACAAAAGAAGAGATTGCCAATTTACCTGGCAAAG 592
.||.|||||.|||.|..|||||||.|...|.|||..|.|.||.|...|||
BL00821___oxd 543 CGCAAACTTCGGCATTTCAAAAGACGTCGTCGCCTCTCTTCCAGTTGAAG 592
BSNT_04956___ 593 AAAAATATATATTTGAA-AACCAACTTCCTGGCAGT-TTAAAAGATGATA 640
||||.|||||.||..|| ||.|.| |.||||||.|| ||.|.| |.||.|
BL00821___oxd 593 AAAAGTATATTTTCCAAGAAGCGA-TCCCTGGCTGTCTTGAGA-AAGACA 640
BSNT_04956___ 641 TTGTGGAAGGGCCAAATGGCGAA--GTGCCT-TATCCATTT-ACTTACCG 686
..||.|||.|.||.||.| ||| ||.||| |||| ||| |..|||
BL00821___oxd 641 AAGTTGAAAGCCCGAACG--GAACGGTACCTCTATC--TTTCAGCTAC-- 684
BSNT_04956___ 687 ACTT--CTTGAACAAGAGCCGATCGAATCTGAGGGAGGAAATGTATACAT 734
|.|| ||||||||.||.|||||...|||....||||||||.||||..||
BL00821___oxd 685 AATTTGCTTGAACAGGAACCGATTATATCCATCGGAGGAAAAGTATGGAT 734
BSNT_04956___ 735 TGCAGATTCGACAAACTTCAAAGTGTCTAAAACCATCGCATCAGCGCTCG 784
|||.|||||.||.||||||||||..||.|||||.|||||.||.|||.|.|
BL00821___oxd 735 TGCCGATTCCACGAACTTCAAAGCATCGAAAACGATCGCTTCTGCGTTAG 784
BSNT_04956___ 785 TAACAGTAGAACCCGGCGCCATGAGAGAACTGCACTGGCATCCGAATACC 834
|...|||.|||||.||.|.|||..|.||.||||||||||||||||||||.
BL00821___oxd 785 TGGAAGTCGAACCTGGAGGCATCCGGGAGCTGCACTGGCATCCGAATACA 834
BSNT_04956___ 835 CACGAATGGCAATACTACATCTCCGGTAAAGCTAGAATGACCGTTTTTGC 884
.||||||||||.||.|||||.|||||..||||.|.||||||.|||||.||
BL00821___oxd 835 GACGAATGGCAGTATTACATTTCCGGACAAGCGAAAATGACGGTTTTCGC 884
BSNT_04956___ 885 ATCTGACGGCCATGCCAGAACGTTTAATTACCAAGCCGGTGATGTCGGAT 934
..|.|||||.|||||||||||.|||||||||||.|||||.||||||||.|
BL00821___oxd 885 TGCCGACGGGCATGCCAGAACATTTAATTACCAGGCCGGAGATGTCGGCT 934
BSNT_04956___ 935 ATGTACCATTTGCAATGGGTCATTACGTTGAAAACATCGGGGATGAACCG 984
||||.||.||.||||||||.||.|||||..||||.|..||.|||||.|||
BL00821___oxd 935 ATGTGCCGTTCGCAATGGGACACTACGTCCAAAATACAGGAGATGAGCCG 984
BSNT_04956___ 985 CTTGTCTTTTTAGAAATCTTCAAAGACGACCATTATGCTGATGTATCTTT 1034
|||...||..|.|||||.||||||||||||||.||||||||.||.||.||
BL00821___oxd 985 CTTCGGTTCCTCGAAATTTTCAAAGACGACCACTATGCTGACGTTTCGTT 1034
BSNT_04956___ 1035 AAACCAATGGCTTGC-CATGCTTCCTGAAACATTTGTTCAAGC--ACACC 1081
||||||||||||.|| |.|| ||||.|||....||||.| || .||||
BL00821___oxd 1035 AAACCAATGGCTCGCGCTTG-TTCCGGAAGAGCTTGTCC--GCCAGCACC 1081
BSNT_04956___ 1082 TTGACTTGGGCAAAGACTTTACTGATGTGCTTTCAAAAGAAAAGCACCCA 1131
|||||.|.||||..||.|||||..|..||||.||.|||||||||||.||.
BL00821___oxd 1082 TTGACGTCGGCAGCGAATTTACAAAAATGCTCTCTAAAGAAAAGCATCCG 1131
BSNT_04956___ 1132 GTAGTGAAA------AAGAAATGCAGTAAATAA 1158
||.||.||| |||||| |||
BL00821___oxd 1132 GTCGTCAAATTTGATAAGAAA-----TAA---- 1155
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