Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04591 and BL00815
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:44
# Commandline: needle
# -asequence dna-align/BSNT_04591___yuxG.1.5803.seq
# -bsequence dna-align/BL00815___yuxG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04591___yuxG-BL00815___yuxG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04591___yuxG-BL00815___yuxG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04591___yuxG
# 2: BL00815___yuxG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2130
# Identity: 1508/2130 (70.8%)
# Similarity: 1508/2130 (70.8%)
# Gaps: 120/2130 ( 5.6%)
# Score: 5016.0
#
#
#=======================================
BSNT_04591___ 1 ATGGTGAAGCATATATGGGATTCAGA--CCGA-GCTGCAAAGCTGCCTAA 47
||||||||..||.||||| ||||| |.|| ||||||..|||||.|..
BL00815___yux 1 ATGGTGAAATATTTATGG---TCAGAGTCTGAGGCTGCATCGCTGCGTCC 47
BSNT_04591___ 48 AGGTGTAGAGGAATTGGTGTATAGGTCCAATTTGATCGGGTCAGACCGCA 97
.|||.|.|..||..|.||.||..|.||||||.|||||||..|.|||||..
BL00815___yux 48 GGGTCTTGCCGAGCTCGTCTACCGTTCCAATCTGATCGGCGCTGACCGTT 97
BSNT_04591___ 98 CTGTCTGCAACTGGGGCGGGGGGAATACATCTATGAAAACAACGGAAAAG 147
|.||||||||||||||||||||.||.|||||.||||||||.||.||||||
BL00815___yux 98 CGGTCTGCAACTGGGGCGGGGGAAACACATCGATGAAAACGACAGAAAAG 147
BSNT_04591___ 148 GATTTTAGAGGCCGTGAAATAGAAGTCATGTGGGTAAAAGGAAGCGGTTC 197
|||||.||||||.|.||.||.||.||.||||||||.|||||.|||||.||
BL00815___yux 148 GATTTCAGAGGCAGGGACATCGAGGTGATGTGGGTGAAAGGCAGCGGCTC 197
BSNT_04591___ 198 GGATTTGGCAACAATGAAAACGCATAACTTTACCGGTTTGAAATTAGATG 247
|||.|||||.||.|||..|.||....|.||||||||..|||...|.||||
BL00815___yux 198 GGACTTGGCGACGATGTCAGCGGGCCAATTTACCGGACTGAGGCTGGATG 247
BSNT_04591___ 248 ATATCCGCCCGCTGATTAAAAGGGACCA-AATGCCAGATGAAGAAATGGT 296
||||.||.||||||| |..||.|||.|| .|||.|.|||||||||||
BL00815___yux 248 ATATTCGTCCGCTGA-TGGAACGGAGCAGCATGACCGATGAAGAAAT--- 293
BSNT_04591___ 297 AGAC----TACCTGTCTCATTGTATGATAGACAGCAAACATCCCCGCCCT 342
||| ||..||||.|||||.|||||.|||.|.||.|||||.||.||.
BL00815___yux 294 -GACGGCATATTTGTCCCATTGCATGATGGACGGAAAGCATCCGCGGCCG 342
BSNT_04591___ 343 TCAATTGAAACGCTATTACACGCTTTTCTGCCATACAAACATGTTGACCA 392
||.||.||||||||..|.||.||||||.||||.|.....|||||.||.||
BL00815___yux 343 TCGATCGAAACGCTTCTTCATGCTTTTTTGCCGTTTCCGCATGTCGATCA 392
BSNT_04591___ 393 TACCCATCCAGATGCGATTATCAGCATATGCTG-TGCAGATAATGGAAAA 441
.|||||.||.|||||.||.||||||||.||||| ||| ||||||||||||
BL00815___yux 393 CACCCACCCCGATGCAATCATCAGCATCTGCTGCTGC-GATAATGGAAAA 441
BSNT_04591___ 442 CAAATCGCTGAAGACATTTACGGAAACCGATTTGTATGGGTGCCATACGT 491
.|.|||||.||.||.||.|||||.|.||||||||||||||||||.||.||
BL00815___yux 442 GAGATCGCAGAGGAGATATACGGCAGCCGATTTGTATGGGTGCCTTATGT 491
BSNT_04591___ 492 TCGCCCTGGATTTACTTTGTCTAAAATGATCGCTGAAGGCGTAGCAAACA 541
..|.||.||.|||.||||.||.||.|||||.||.|||||.||...|||||
BL00815___yux 492 CAGACCGGGCTTTGCTTTATCGAAGATGATAGCAGAAGGTGTGAAAAACA 541
BSNT_04591___ 542 ATCCCCACGCCGAGCTTATATTAATGGAGAAACACGGCTTAGTCACTTGG 591
|.||..|.||.||||||.|.|||||||||||.|||||..|.|||||||||
BL00815___yux 542 ACCCGAATGCAGAGCTTGTTTTAATGGAGAAGCACGGGCTCGTCACTTGG 591
BSNT_04591___ 592 GGAGAGACGTCTGAAA-CATGTTATCAAAAAACGATATCCATCATTCAAG 640
||.||.||||| |||| .|.|.|||.|..|.|||||..||.|.||||..|
BL00815___yux 592 GGGGAAACGTC-GAAAGAAAGCTATGATCAGACGATTGCCGTGATTCGCG 640
BSNT_04591___ 641 AAGCCG-AGCAGTATGTTAA----CGATCG---TATCAATCAGCATGAGG 682
||||.| |||| |||.|||| ||.||| .||| |||||| .|
BL00815___yux 641 AAGCGGAAGCA-TATATTAAAAGCCGTTCGGAAGATC-ATCAGC----CG 684
BSNT_04591___ 683 TATT--CGGAGGCAAAAGGTATC-AGCCGCT---GCCGGAGGATAAAAGA 726
| || |||| ||.|.|| || ||||||| .||||||| |..|.
BL00815___yux 685 T-TTGGCGGA--CAGATGG--TCGAGCCGCTTGCACCGGAGG---AGCGG 726
BSNT_04591___ 727 AAACAAATCTTGGCAGGCATCATGCCTGTGATCAGAGGAGCAGTAAGTGA 776
||||..||.||.||.|..|||.||||.||.|||.|.||.||.||.||.|.
BL00815___yux 727 AAACGGATTTTAGCCGATATCTTGCCGGTCATCCGCGGCGCTGTCAGCGG 776
BSNT_04591___ 777 AGAAAAGAAAATGATCCTTTCCTATGAT--GATCATGACGATGTCTTGGA 824
.|||||....|||.||.|..|| ||.| |||..|||||||||..|.||
BL00815___yux 777 GGAAAAACGCATGCTCGTCACC--TGGTGCGATGCTGACGATGTGCTCGA 824
BSNT_04591___ 825 ATTTGTAAACAGTGTCCAAGCGCCAGCA------CTTTCGCAAATCGGTG 868
|||.|..||||| ||.|||| ||| |||||.||..||||.|
BL00815___yux 825 ATTCGCGAACAG----CAGGCGC--GCACCGTCGCTTTCACAGGTCGGCG 868
BSNT_04591___ 869 CGGCATGCCCGGATCACCTTGTTCACACAAAACGGGTTCCGCTG--TACA 916
|.||.||.|||||||||||.|||||.|||||.|||||.| ||| ||.|
BL00815___yux 869 CCGCTTGTCCGGATCACCTCGTTCATACAAAGCGGGTGC--CTGCCTATA 916
BSNT_04591___ 917 TTGATTGGAATCCGGAAACTCAAGATGTGCACA----AGCTTGCAGATCT 962
||...||||||||.| ||.||.| |..|||| .|||.|..||.|.
BL00815___yux 917 TTCCGTGGAATCCCG---CTGAACA-GGACACAGAAGCGCTGGTCGACCG 962
BSNT_04591___ 963 GATCAAGTCAGGAGTCGAGA------CCTTTACATCAGA---GTATCAGG 1003
|||||| |..||||| ..|||| .||| ||||...|
BL00815___yux 963 GATCAA------AACCGAGATTGCTGGATTTA---AAGAGTCGTATGCCG 1003
BSNT_04591___ 1004 CTTACTTTACACGCAATCAGCAGGATGGGGATCAAATCTTTGAATCCGCC 1053
|.||.|||..|||.||.|.|||.||.||.||..|.||.||||||.|.||.
BL00815___yux 1004 CCTATTTTCAACGAAACCGGCACGAAGGAGACGAGATGTTTGAACCGGCG 1053
BSNT_04591___ 1054 CCGCGGGTGATATTGATTCCTGGAATCGGAATGGTGAATACAGGAAAAAG 1103
||.||.|||||..||||.||.||||||||.|||||||...||||.|||||
BL00815___yux 1054 CCTCGCGTGATGCTGATCCCGGGAATCGGCATGGTGACAGCAGGGAAAAG 1103
BSNT_04591___ 1104 TTATGCCATGTCTAAAGTAAGCGGGGCTTTATATCGGAGGGCCATCGCCG 1153
....||.|||.|.||.||.|||.|.|.||||||.||..||||.||.||||
BL00815___yux 1104 CCTGGCGATGGCGAAGGTCAGCCGAGATTTATACCGCCGGGCGATTGCCG 1153
BSNT_04591___ 1154 TGATGAAAGGA--GCAACCGCTCTGGGGCAATTTGTTTCTTTACATGAAA 1201
|.|||||.||| |.|| |..||.||..|.|||||.|||.|..||||..
BL00815___yux 1154 TCATGAAGGGAACGGAA--GTCCTTGGAAACTTTGTATCTCTCAATGAGG 1201
BSNT_04591___ 1202 ATGAATCCTACCATGTCGAATATTGGCCGCTCGAACTATATAAACTCACG 1251
|.|||||||||.||||.||||||||||||||.||.||.||||||.|.|||
BL00815___yux 1202 AAGAATCCTACAATGTTGAATATTGGCCGCTTGAGCTTTATAAATTAACG 1251
BSNT_04591___ 1252 CTGGCCCCGCCGGAAGCAGAATTTTCCCGAAAAGTAGCGTTGATAACTGG 1301
||.||.|||||||||||.||||||||.||.||..|.||.||..|.||.||
BL00815___yux 1252 CTTGCTCCGCCGGAAGCCGAATTTTCGCGCAAGATCGCATTTGTGACGGG 1301
BSNT_04591___ 1302 AGGAGCCGGCGGAATCGGCAGTGCAGCATGCCGCCGATTTGCAGCT-GAG 1350
.|||||.||||||||||||||.|..||.||||||||..|||| .|| ||.
BL00815___yux 1302 GGGAGCGGGCGGAATCGGCAGCGAGGCCTGCCGCCGCCTTGC-TCTAGAA 1350
BSNT_04591___ 1351 GGAGGGCACGTGATCGTAGCTGATCTGAATATAGAAGGCGCACAGAAAAT 1400
||.|.|||.||..|.||.|||||..|.|||||.|||||||||.|.||||.
BL00815___yux 1351 GGCGCGCATGTTGTGGTCGCTGACATTAATATTGAAGGCGCAGAAAAAAC 1400
BSNT_04591___ 1401 TGCCGGGGAAATAAACGATGCATACGGAGAAGGACGGGCAATGGCTGTCA 1450
.||.|..||.||.||.|||..||||||.|.||.|||.||....||.|||.
BL00815___yux 1401 AGCGGCCGAGATTAATGATCAATACGGTGCAGAACGAGCTTACGCCGTCC 1450
BSNT_04591___ 1451 AAATGGATGTGACAAAGGAGGAAGACGTACAATCAGCTTTTGAACGAG-- 1498
..|||||||||||.||.||.||.||.||.||..|.||.|| ||||
BL00815___yux 1451 GCATGGATGTGACGAAAGAAGAGGAGGTTCAGACGGCCTT----CGAGGA 1496
BSNT_04591___ 1499 ---CGGCGCTTGCT----TACGGCGGCATTGATATCGTCGTCAATAATGC 1541
||.| || ||||||||.|||||.|||.|.|||||.|||||
BL00815___yux 1497 AATCGCC-----CTCAAATACGGCGGGATTGACATCCTTGTCAACAATGC 1541
BSNT_04591___ 1542 CGGGCTGGCCACATCAAGCCCATTTGACGAAACAAGTCTAAAAGAATGGA 1591
.||.||.||.|||||||||||..||||.|||||.|..||..|||||||||
BL00815___yux 1542 GGGCCTTGCGACATCAAGCCCGCTTGATGAAACGACGCTCGAAGAATGGA 1591
BSNT_04591___ 1592 ATCTTAATATGAATGTTTTAGGAACAGGCTATTTCCTTGTAGCCCGTGAA 1641
|.||.|||||||||||..|.||||||||.||||||||.||.|||.|.|||
BL00815___yux 1592 ACCTGAATATGAATGTACTCGGAACAGGATATTTCCTCGTGGCCAGAGAA 1641
BSNT_04591___ 1642 GCGTTTAAACAGATGAAACACCAAAATAGAGGCGGAAGCATGGTATTTGT 1691
||.|||||.||.||||||.|.|||..|..||||||.||||||||.|||||
BL00815___yux 1642 GCTTTTAAGCAAATGAAAAAACAAGGTTCAGGCGGCAGCATGGTGTTTGT 1691
BSNT_04591___ 1692 CGGATCGAAAAATTCGGTTTATGCGGGCAAAAACGCCTCTGCCTACAGCT 1741
|||.|||||||||||.||||||||.|||||||||||.||.||.|||||||
BL00815___yux 1692 CGGTTCGAAAAATTCCGTTTATGCAGGCAAAAACGCATCAGCATACAGCT 1741
BSNT_04591___ 1742 CGGTTAAGGCGCTTGAAACCCATTTAGCAAGATGCATTGCTGCAGAAGGT 1791
|.|..||.||||||||....|||||.||.||||||||.||.||.|||||.
BL00815___yux 1742 CTGCAAAAGCGCTTGAGGTTCATTTGGCGAGATGCATCGCGGCTGAAGGC 1791
BSNT_04591___ 1792 GGAGAATTCGGCATTAGGGTCAACTCTGTTTTGCCTGATGCGGTTCTTCA 1841
|||...|.|||.||..|.|..||.||.|||.|.||.||||||||.|||||
BL00815___yux 1792 GGACCGTACGGAATCCGTGCGAATTCAGTTCTTCCGGATGCGGTGCTTCA 1841
BSNT_04591___ 1842 AGGATCGGCAATCTGGGGTTCAAGCTGGCGGGAGGAACGAGCCGCGGCGT 1891
|||.|||||.|||||||..||.|..|||||.||.|||.|||||||.||.|
BL00815___yux 1842 AGGGTCGGCCATCTGGGACTCCAAATGGCGCGAAGAAAGAGCCGCCGCCT 1891
BSNT_04591___ 1892 ACGGGATTGAACCAGATCAGCTGGAGGAACATTACCGGAAACGGACAGC- 1940
|||||||||||||.||.|.|||.||.||.||||||||.|||||.||.||
BL00815___yux 1892 ACGGGATTGAACCCGACCGGCTTGAAGAGCATTACCGCAAACGTACGGCT 1941
BSNT_04591___ 1941 ATTGCTCGTCAATATTTACCCGGAGGATATTGCCGAAGCCATTGCATTCT 1990
.||.| ||||||.|||||.||.|..||.||||||||.||.||.||.|..|
BL00815___yux 1942 CTTTC-CGTCAACATTTATCCCGCCGACATTGCCGAGGCGATCGCTTATT 1990
BSNT_04591___ 1991 TCGCTTCTTCTAAAGCCGAAAAAACAACGGGCTGCATGATCACGGTAGAC 2040
|||||||....|||.|.|.||||||.|||||.||||||.|.|||||.|||
BL00815___yux 1991 TCGCTTCAGAAAAAACGGCAAAAACGACGGGATGCATGCTGACGGTTGAC 2040
BSNT_04591___ 2041 GGCGGCGTCCCTGCTGCTTTTACGCGTTAG 2070
||.||.||.||.||.||.|||.|..|.||.
BL00815___yux 2041 GGGGGAGTGCCGGCCGCATTTTCAAGGTAA 2070
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