Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03539 and BL00796
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence dna-align/BSNT_03539___proI.1.5803.seq
# -bsequence dna-align/BL00796___proI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03539___proI-BL00796___proI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03539___proI-BL00796___proI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03539___proI
# 2: BL00796___proI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 934
# Identity: 535/934 (57.3%)
# Similarity: 535/934 (57.3%)
# Gaps: 209/934 (22.4%)
# Score: 1314.0
#
#
#=======================================
BSNT_03539___ 1 ATGAAAAAGATAGGATTTGTCGGCGCCGGGTCAATGGCAGAAGCAATGAT 50
||||||...|||||||||.||||.|||||.||.|||||.|||||.|||||
BL00796___pro 1 ATGAAACGAATAGGATTTATCGGAGCCGGTTCGATGGCTGAAGCGATGAT 50
BSNT_03539___ 51 CAACGGCATTTTGCAAAGCGGCATCACAA---AACCAGAACACATCTATA 97
.||.||..||.|..||||||| ..||| ||||.|| ..|.|||
BL00796___pro 51 TAAGGGGCTTGTCAAAAGCGG---TGCAATGGAACCTGA----GGCGATA 93
BSNT_03539___ 98 ----TTACAAATCGCTCAAATGACGAGC--GTCTGATTGAATTAAAGGAA 141
||||.||||..||.||| ||| || |.||...||||||||..||.
BL00796___pro 94 TTCGTTACGAATCAGTCGAAT-ACG-GCCAGGCTTCGTGAATTAAGCGAG 141
BSNT_03539___ 142 ACGTACGGCGTGCGTCCATGCAG------AGATA----AAAATGAGTTTT 181
||.|||||.|| ||||.| ||||| |||| .
BL00796___pro 142 ACTTACGGGGT------ATGCGGAGAAGCAGATACGGCAAAA-------G 178
BSNT_03539___ 182 TCACTCACACC------GATATCATTATCCTCGCTT------TCAAACCG 219
||.| |.|| |||| || ||||.|| |.||.|||
BL00796___pro 179 TCGC---CGCCCGGTCGGATA-CA-----CTCGTTTTGGCGATGAAGCCG 219
BSNT_03539___ 220 AAAGACGCGGCGGAAAGCATCGACAGCA-TCCGGCCGTATAT---CAAGG 265
|||||||||||.|.|.|.||.| |.||| ||||.||.|||.| .||.|
BL00796___pro 220 AAAGACGCGGCAGGAGGAATAG-CCGCACTCCGCCCCTATTTGCGAAAAG 268
BSNT_03539___ 266 ATCAGCTTGTAATTTCAGTACTTGCAGGCCTTACCATCGAAACCATTCAG 315
|.|||||..|.||.||.||.|||||||||.||.|.||..|.||.||.|||
BL00796___pro 269 AACAGCTGCTGATCTCTGTTCTTGCAGGCATTCCGATTCATACGATCCAG 318
BSNT_03539___ 316 CATTAT------TTTGGCAGAAAGCTCGCGGTCATTCGCGTCATGCCTAA 359
||.||| .||| ||||..|.||..|..|.|.||||||.||
BL00796___pro 319 CACTATGCCGGGCTTG------AGCTGCCTGTTGTGAGAGCCATGCCGAA 362
BSNT_03539___ 360 TACATCAG-CGGCAATCAGAAAATCAGCAACCGGATTTTCCGTAAG---- 404
||||||.| ||.||.||| |||||||||.||.|..|||.|.|.|||
BL00796___pro 363 TACATCGGCCGCCATTCA-AAAATCAGCCACAGCCTTTGCGGCAAGCCCG 411
BSNT_03539___ 405 -----CACGGAAGCAAGCAAGAATGATATTATTGCCGCAA------AAGC 443
||||.||| |||| || |||.|.|| .|.|
BL00796___pro 412 CTTGTCACGAAAG--AGCA-----GA------TGCAGGAAGCGGCTGACC 448
BSNT_03539___ 444 TCTATTG-GAAACAATCGGT-GATGCA-----ACACTGGTTGAGGAGCGG 486
||| ||| || |||| | ||| |||.|.||||||||
BL00796___pro 449 TCT-TTGCGA------CGGTCG--GCAGCGTTACAATCGTTGAGGA---- 485
BSNT_03539___ 487 CAT-----CTTGACGCTGTCACTGCAATCGCAGGCAGCGGCCCGGCCTAT 531
|| |||||.|||||.||.||..|.||.||.|||||.||.||.|.|
BL00796___pro 486 -ATCTGCCCTTGATGCTGTGACAGCCGTAGCCGGAAGCGGGCCCGCTTTT 534
BSNT_03539___ 532 GTGTATCGTTATATTGAGGCGATGGAAAAAGCA-GCACAAAAAGTAGGAT 580
||.|||||.|.|.|.||.||..| ||| || ||.||.|
BL00796___pro 535 GTTTATCGGTTTGTCGAAGCCCT-------GCAGGC-------GTCGGCT 570
BSNT_03539___ 581 ---TAGAT-----------AAAGAAACGGCAAAAGCA-CTCATTTTGCAG 615
.||.| ||| |||||||.||| || ||.|||.|..|.
BL00796___pro 571 GCCGAGCTGGGGCTTCCTGAAA-AAACGGCGAAA-CAGCTGATTATCGAT 618
BSNT_03539___ 616 ACAATGGCAGGGGCAACAGATATGCTCCTCCAAAGCGGCAAACAGCC--- 662
|..||||||||.||..|..|.||| ||..|||.|||||.|.|.||
BL00796___pro 619 ATGATGGCAGGAGCGGCTCAAATG---CTTGAAACCGGCAGAGATCCTTC 665
BSNT_03539___ 663 -GGAAAAGCTGCGTAAAGAAATCACCAGTCCTGGGGGCACTACAGAGGCA 711
|..| ||.|.|||||.|||||.||..|.||.||.||.||.||.|||
BL00796___pro 666 TGTCA----TGAGGAAAGAGATCACAAGCGCCGGAGGGACAACGGAAGCA 711
BSNT_03539___ 712 GGTCTTCG--CGCTTTACAGGACTCCCGCTTTGAAGAAGCAATTAT-TCA 758
||.|||.| .||||.|| |||...|..||||||.|..|..|.|| ||
BL00796___pro 712 GGCCTTAGGATGCTTGAC--GACCATCAATTTGAACAGACCGTCATATC- 758
BSNT_03539___ 759 CTGTATTGAAGAAACAGCTAAACGGAGCGCAGAAATCAAAGAACAGTTTG 808
|||..|..|||||.|.||.||.||....||.|||.|||..||...|||
BL00796___pro 759 CTGCGTCAAAGAAGCGGCGAATCGTTCTGCGGAACTCAGGGATATGTT-- 806
BSNT_03539___ 809 CCGGTGCCGCC-----TTAGAGAGACATTCTTAG 837
||||||| |||.
BL00796___pro 807 ----TGCCGCCAAAATTTAA-------------- 822
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