Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03480 and BL00785
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence dna-align/BSNT_03480___spoVAF.1.5803.seq
# -bsequence dna-align/BL00785___spoVAF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03480___spoVAF-BL00785___spoVAF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03480___spoVAF-BL00785___spoVAF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03480___spoVAF
# 2: BL00785___spoVAF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1524
# Identity: 1047/1524 (68.7%)
# Similarity: 1047/1524 (68.7%)
# Gaps: 93/1524 ( 6.1%)
# Score: 3420.5
#
#
#=======================================
BSNT_03480___ 1 ATGCCGGACCACAAGGAAGAGAAAATTCGGGTTTATCGGA-------ATC 43
|||...|..||.|||.|||||||.| || |.||.| |||
BL00785___spo 1 ATGAGTGCTCAAAAGCAAGAGAAGA--CG-----AACGTATTCCTTGATC 43
BSNT_03480___ 44 CAGCTAAAAATGAAGAGTATTTCAAAAACCGTGTTGGGATGGG-GACGAG 92
|..||||.|||||||.|||||||||.||.||.||.||.||||| || .||
BL00785___spo 44 CTTCTAAGAATGAAGCGTATTTCAAGAAGCGGGTCGGCATGGGAGA-AAG 92
BSNT_03480___ 93 CTATGATGTAGGTGTTCGCAAGCTCACGATTTT---AGATAAAGAGATCC 139
||.|||..|.||.||.||.|||.||...|||.| |.||.||| |.|
BL00785___spo 93 CTTTGACCTTGGCGTACGGAAGGTCTTTATTCTCGGACATGAAG---TTC 139
BSNT_03480___ 140 AGCTTTACTATCTAAATGGATTATGCGATACAGTTTATATTATTCATTTA 189
|||||||.|||.|.||.|||||.|||||.|||...||.||.|||||..|.
BL00785___spo 140 AGCTTTATTATGTCAACGGATTGTGCGACACACAATACATCATTCACCTG 189
BSNT_03480___ 190 ATGAGAGAGCTTGTTGCCATTAACAATCGGA---------AAGAAGACCC 230
.|.|||||.| ||.||| |||.|| ||.||||..|
BL00785___spo 190 TTAAGAGAAC-TGGTGC--------ATCTGAATGATAAAGAAAAAGAATC 230
BSNT_03480___ 231 TGATGAGCTGGTCGACATCGTCGAAAACAGGCTGCTTAACGCCCAGGTCG 280
.|..|||.|.|..||||||||||||||||||||..|.|||...|||||..
BL00785___spo 231 GGGCGAGGTCGAAGACATCGTCGAAAACAGGCTTTTGAACCAGCAGGTTT 280
BSNT_03480___ 281 AAAAAGTAAAAAC-CTTGGATGAAACCACCGACCAAGTGCTGTCCGGGCT 329
.|||||...|||| ||| ||||||.|...||||||||||.||||.||.||
BL00785___spo 281 CAAAAGCGGAAACGCTT-GATGAAGCTGTCGACCAAGTGTTGTCAGGACT 329
BSNT_03480___ 330 CGTCGCTGTCATTGTTGAAGGTGCAGGTTTCGCATTTATAATTGACGTCA 379
.||.||..||||.||.||||.|||.||.||.||.|||||.||.||.||||
BL00785___spo 330 GGTTGCCATCATCGTCGAAGATGCGGGCTTTGCTTTTATCATCGATGTCA 379
BSNT_03480___ 380 GAAGCTATCCGGGCAGAAACCCGGAAGAACCTGATACGGAAAAGGTAGTC 429
|||||||.||||||||||..|||||||||||||||||.|||||.||.||.
BL00785___spo 380 GAAGCTACCCGGGCAGAACGCCGGAAGAACCTGATACAGAAAAAGTCGTA 429
BSNT_03480___ 430 AGAGGAGCCAGAGACGGATTTGTTGAAAATATCGTCGTCAATACGGCCCT 479
.|.||.||.||.||||||.|.||.||.||.|||.|||||||.||.|||||
BL00785___spo 430 CGCGGTGCAAGGGACGGACTCGTCGAGAACATCATCGTCAACACAGCCCT 479
BSNT_03480___ 480 TCTCAGAAGGCGGATCAGAGACGAGCGCCTTCGAGTCAAGATGACTAAAG 529
..|.|||.|.|||||||||||.||||||.|.||...|||.|||..|.|..
BL00785___spo 480 GATTAGACGCCGGATCAGAGATGAGCGCTTGCGCTACAAAATGCTTCATA 529
BSNT_03480___ 530 TTGGTGAGCGGTCAAAGACGGATTTAAGCATTTGTTATATAGAAGATATA 579
|.|||||.||.||.||.||.||..|..||.|.||.|||.|.|||||..|.
BL00785___spo 530 TCGGTGAACGCTCTAAAACAGACATCTGCCTCTGCTATTTGGAAGACGTT 579
BSNT_03480___ 580 GCTGATCCGGATCTGGTTGAGATCGTAGAAAAAGAAGTTGCATCCATTGA 629
||.|||||.|||||.|||||..|..||.||||||||.|||.| ||
BL00785___spo 580 GCAGATCCCGATCTTGTTGAAGTATTAAAAAAAGAAATTGAA------GA 623
BSNT_03480___ 630 TG------TCGATGGATTAACAATGGCAGACAAAACTGTCGAGGAATTCA 673
|| ||||.||..|..|.|||.|.||.|||.|.||.|||||||||.
BL00785___spo 624 TGTGAAGATCGACGGGCTGCCGATGTCGGATAAATCGGTAGAGGAATTCC 673
BSNT_03480___ 674 TTGTTAATCAAAGCTATAATCCTTTTCCGCTCGTGCGCTATACAGAAAGA 723
|.||....|||.||||.|||||.||||||||.||..|.|.|||.|||||.
BL00785___spo 674 TGGTCGGCCAAGGCTACAATCCGTTTCCGCTTGTCAGGTTTACGGAAAGG 723
BSNT_03480___ 724 CCGGATGTGGCCGCAAATCATGTTCTAGAAGGCCATGTTATCATTATAGT 773
.|.||.||.|||||||..|||.||.||||.||.|||||.|||.|.||.||
BL00785___spo 724 GCAGACGTAGCCGCAAGCCATATTTTAGAGGGGCATGTCATCGTGATCGT 773
BSNT_03480___ 774 GGACACATCGCCGAGTGTGATCATTACCCCGACGACTTTATTTCACCATG 823
.||.||.|||||.||.||.|||||.||.|||||.|||||.||||||||||
BL00785___spo 774 CGATACGTCGCCAAGCGTCATCATCACACCGACCACTTTGTTTCACCATG 823
BSNT_03480___ 824 TGCAGCATGCTGAAGAATATAGGCAGGCGCCTTCAGTCGGGACCTTTTTA 873
|.|||||||||||.|||||.||.|||.||||..|.||.|||||.||||||
BL00785___spo 824 TTCAGCATGCTGAGGAATACAGACAGACGCCGGCTGTTGGGACGTTTTTA 873
BSNT_03480___ 874 AGATGGGTAAGATTTTTCGGTATTCTTGCTTCTACTTTATTTCTTCCGAT 923
||.|||||..|.||||||||||||.|.||.||.||.||.||.||.|||.|
BL00785___spo 874 AGGTGGGTGCGGTTTTTCGGTATTTTGGCCTCCACCTTTTTGCTGCCGCT 923
BSNT_03480___ 924 CTGGTTTCTCTTTGTGCTTCAGCCTGACCTGCTCT---CGGACAATATGA 970
.|||.|.||.|||||..||||.|| |.| ||||| |.||.|||.|..
BL00785___spo 924 TTGGCTGCTGTTTGTCATTCATCC-GTC--GCTCTTGCCTGATAATTTAT 970
BSNT_03480___ 971 AATTTATCGGTTTAAATAAAGATACGCATATCCCGATCATCCTGCAGATA 1020
..||||||||.||.||||||||.||.|||||.|||||.|||.|||||||.
BL00785___spo 971 CGTTTATCGGGTTGAATAAAGACACCCATATTCCGATTATCATGCAGATT 1020
BSNT_03480___ 1021 TTTTTAGCTGACTTAGGAATCGAGTTTCTCAGAATGGCTGCCATTCACAC 1070
||..|.||.||..|.||..||||.|||.|.||||||||.||||||||.||
BL00785___spo 1021 TTCCTGGCGGATCTCGGCGTCGAATTTTTAAGAATGGCCGCCATTCATAC 1070
BSNT_03480___ 1071 CCCGACGGCTTTATCAACAGCAATGGGTTTAATTGCCGCTGTTCTGATCG 1120
.||||||||..|.||.||.||||||||..|.||.||||||||..||||||
BL00785___spo 1071 GCCGACGGCGCTTTCGACTGCAATGGGCCTGATCGCCGCTGTATTGATCG 1120
BSNT_03480___ 1121 GGGAGATTGCGATTGAGGTCGGCCTTTTTTCTCCTGAGGTGATTCTGTAC 1170
|.||.||.|||||..|.||||||.|.||||||||.||.||.|||.|.|||
BL00785___spo 1121 GCGATATCGCGATCAATGTCGGCTTGTTTTCTCCCGAAGTCATTTTATAC 1170
BSNT_03480___ 1171 GTCTCACTTGCGGCGATTGGAACCTTTACGACGCCCAGTTATGAATTAAG 1220
||.||.||..||||.||.|||.|||..|||||.||.||.||.||..|.||
BL00785___spo 1171 GTTTCCCTCTCGGCAATCGGAGCCTACACGACACCAAGCTACGAGCTGAG 1220
BSNT_03480___ 1221 CTTGGCAAACAAAATG----AGCCGTCTTGTCCTCATGATACTCGTTGC- 1265
|.||||.||.|||||| |||.|| ||.|.| |||||.|.||.||
BL00785___spo 1221 CCTGGCGAATAAAATGGTGAAGCTGT-TTATGC---TGATATTGGTGGCG 1266
BSNT_03480___ 1266 CTTATTTCATATAAA----AGGG-CTCGTCATCGGATTTACAGTGCTAAT 1310
||| |.|||| |||| .|.|||||||||||.||..|..|||.
BL00785___spo 1267 CTT------TTTAAAGTGGAGGGATTTGTCATCGGATTAACGATCTTAAC 1310
BSNT_03480___ 1311 TATTGCCATGGCAAGCATCAAATCCCTTCAGACACCGTACTTATGGCCGC 1360
|||.|..|||.|....||||..||..|.|..||.||.|||||||||||.|
BL00785___spo 1311 TATAGTGATGACTTCGATCAGGTCATTGCGAACGCCTTACTTATGGCCTC 1360
BSNT_03480___ 1361 TGATTCCCTTTAACGGAAAGGCGCTGTGGCAGGTTCTTGTCCGCACAGCG 1410
|..|.||.||.||.|||||.|||.|.|||||.|||||.||.|||||..|.
BL00785___spo 1361 TCCTCCCGTTCAATGGAAAAGCGTTTTGGCATGTTCTCGTGCGCACGTCC 1410
BSNT_03480___ 1411 AAACCTGGCGCAAAAGTAAGACCCAGTATCGTTCACCCCAAAAATCGCTT 1460
...||.||.|.||||||.||.||.||.||||||||.||.|.|||.||||.
BL00785___spo 1411 GTTCCAGGGGGAAAAGTCAGGCCGAGCATCGTTCATCCGAGAAACCGCTC 1460
BSNT_03480___ 1461 AAGGCAGCC--TACCAATTCATAA 1482
.||.||||| .|
BL00785___spo 1461 CAGACAGCCGTGA----------- 1473
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