Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03483 and BL00782
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence dna-align/BSNT_03483___spoVAD.1.5803.seq
# -bsequence dna-align/BL00782___spoVAD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03483___spoVAD-BL00782___spoVAD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03483___spoVAD-BL00782___spoVAD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03483___spoVAD
# 2: BL00782___spoVAD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1048
# Identity: 768/1048 (73.3%)
# Similarity: 768/1048 (73.3%)
# Gaps: 59/1048 ( 5.6%)
# Score: 2651.0
#
#
#=======================================
BSNT_03483___ 1 ATGAAATTAACAGGAAAGCAAACCTGGGTATTTGAACATCCCATATTTGT 50
|||||||||||||||||.|||||.||||.|||.||..|.||..|.|||||
BL00782___spo 1 ATGAAATTAACAGGAAAACAAACATGGGAATTCGAGAACCCGCTGTTTGT 50
BSNT_03483___ 51 CAACTC-AGCGGGAACGGCAGCAGGACCAAAGGAAAAAGACGGACCGCTC 99
.||||| ||| |||||.||.|..||.||.||.||||||||.||.||.||.
BL00782___spo 51 TAACTCAAGC-GGAACAGCGGTCGGTCCCAAAGAAAAAGAAGGTCCTCTT 99
BSNT_03483___ 100 GG-CTCTTTATTTGATAAAACCTATGACGAAATGCATTGTAATCAAAAAA 148
|| |.| ||||||||.||||.||||||.||||||||.||.||.||.||||
BL00782___spo 100 GGACAC-TTATTTGACAAAAGCTATGATGAAATGCACTGCAACCAGAAAA 148
BSNT_03483___ 149 GCTGGGAAATGGCGGAACGGCAGCTGATGGAAGACGCTGTTAATGT-TGC 197
.||||||||||||.||.||..||||||||||.||.||.|||.| || .||
BL00782___spo 149 ACTGGGAAATGGCAGAGCGCAAGCTGATGGAGGATGCGGTTCA-GTCCGC 197
BSNT_03483___ 198 GCT-TCAAAAAAACAATCTGACAAAAGATGATATTGACCTATTGCTGGCA 246
|.| ||||||.|| |||||.|.|||.||.||.||.||..|.||..||||.
BL00782___spo 198 GTTATCAAAACAA-AATCTTAAAAAGGAAGACATCGATATCTTTTTGGCT 246
BSNT_03483___ 247 GGCGACTTGCTGAACCAAAACGTGACGGCTAACTATGTGGCAAGACACTT 296
|||||..||||.||||||||||||||.||.|||||||||||..|.||.||
BL00782___spo 247 GGCGATCTGCTCAACCAAAACGTGACAGCCAACTATGTGGCGCGGCATTT 296
BSNT_03483___ 297 GAAAATCCCATTTCTTTGTATGTTTGGTGCCTGTTCAACATCAATGGAAA 346
||||||.||.|||||.||..|.|||||.||.||.||.||||||||||||.
BL00782___spo 297 GAAAATTCCTTTTCTCTGCTTATTTGGAGCATGCTCGACATCAATGGAAT 346
BSNT_03483___ 347 CAGTTGCTG-TCGC-ATCA-----GCCTTAGTTGATGGCGGGTTT-GCCA 388
| | |||| |||| ||.||..||||.|| |||||| ||.|
BL00782___spo 347 C-------GATCGCGATCAGTTCGGCGTTGATTGACGG-GGGTTTCGCAA 388
BSNT_03483___ 389 AAAGGGCACTCGCTGCCACTAGCAGTCACAATGCAACTGCGGAAAGACAG 438
|..|.||.||.||.||.||.|||||.||.|||||.||.||.|||||.|||
BL00782___spo 389 AGCGCGCCCTAGCGGCAACCAGCAGCCATAATGCTACGGCAGAAAGGCAG 438
BSNT_03483___ 439 TTTCGCTATCCGACAGAATACGGAGGCCAAAAACCGGACACTGCTACCTC 488
||.|||||.|||||.||||||||.||.||||||||||..||.||.||.||
BL00782___spo 439 TTCCGCTACCCGACGGAATACGGGGGGCAAAAACCGGGAACCGCGACTTC 488
BSNT_03483___ 489 CACTGTAACCGGAAGCGGTGCAGTTGTCATCAGTCAGACA--CCGGGTGA 536
.||.||.|||||||||||.||.||.|||.||||.||| || ||||..||
BL00782___spo 489 GACAGTGACCGGAAGCGGAGCGGTCGTCCTCAGCCAG-CAGCCCGGCGGA 537
BSNT_03483___ 537 TATCCAAATCACAAGTGCGACTGTCGGAAAGGTT-TCTGATTTAGGAATT 585
||..||||.|||||.||.||||||||||.|||| || ||.||.||.|||
BL00782___spo 538 -ATTAAAATTACAAGCGCAACTGTCGGAAGGGTTATC-GACTTGGGGATT 585
BSNT_03483___ 586 ACAGACCCTTTT-----GATATGGGATCGGCTATGGCTCCGGCTGCAGCT 630
||.|| || ||||||||.|||||.|||||.||.|||||.||.
BL00782___spo 586 ACCGA-----TTCGCAAGATATGGGGTCGGCGATGGCACCCGCTGCTGCG 630
BSNT_03483___ 631 GATACAATTAAGCAGCACTTTAAAGATCTCAACCGGACAGCGGATGATTA 680
|||||.||.||||||||.||..|.|||||....||.||..|.||||||||
BL00782___spo 631 GATACGATCAAGCAGCATTTGGAGGATCTGGGACGCACCCCTGATGATTA 680
BSNT_03483___ 681 TGATCTAATCCTGACAGGTGACCTGTCAGGCGTCGGTTCTCCAATCGTAA 730
.|||||.|||.|.||.||.|||||.|||||||||||....||.||..|.|
BL00782___spo 681 CGATCTGATCTTAACCGGCGACCTTTCAGGCGTCGGCAGCCCGATTTTGA 730
BSNT_03483___ 731 AAGACATCTTAAAAGAAGATGGATATCCA-GTCGGCACAAAGCATGATGA 779
|.||..|.||||||||.||.||| |||.| |||||.|||||.|||.||||
BL00782___spo 731 AGGATCTGTTAAAAGAGGAAGGA-ATCAATGTCGGGACAAAACATAATGA 779
BSNT_03483___ 780 TTGCGGGCTTCTGATTTACACTCCGGATCAGCAGGTCTTTGCCGGGGGGA 829
.||||||||..||||.||.||.||.||.|||||.||.|||||.||.||.|
BL00782___spo 780 CTGCGGGCTGATGATCTATACGCCTGACCAGCAAGTTTTTGCAGGTGGAA 829
BSNT_03483___ 830 GCGGCTGTGCTTGTTCAGCGGTTGTCACCTACTCTCATATTTT-TAAGCA 878
||||.||.||||||||.|||||.|||||||...|.|||||||| .|||.|
BL00782___spo 830 GCGGATGCGCTTGTTCCGCGGTCGTCACCTTTGCCCATATTTTCAAAGAA 879
BSNT_03483___ 879 GCTGAGAGAAGGAAATTTAAACCGTGTATTTGTCGTAGCGACCGGGGCAC 928
..||| ||..||||...|.|||.|.||..||||.||.|||||.||.||.|
BL00782___spo 880 ATTGA-AGCGGGAAGGCTGAACAGAGTGCTTGTTGTCGCGACAGGCGCCC 928
BSNT_03483___ 929 TATTAAGCCCGACGATGATCCAGCAAAAAGAA-----ACCATCCCGACTA 973
|.||||||||||||||.||||||||||||||| |||||.| |
BL00782___spo 929 TTTTAAGCCCGACGATCATCCAGCAAAAAGAATCGATACCATGC-----A 973
BSNT_03483___ 974 TCGCCCACGGGGTTGTATTTGAGCGTGC----AGGAGGTGCATCTTAA 1017
|.|||||.||.||.||||||||.||.|| |||.||..| .|||||
BL00782___spo 974 TTGCCCATGGCGTCGTATTTGAACGGGCCGAAAGGGGGAAC-GCTTAA 1020
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