Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03486 and BL00780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence dna-align/BSNT_03486___spoVAB.1.5803.seq
# -bsequence dna-align/BL00780___spoVAB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03486___spoVAB-BL00780___spoVAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03486___spoVAB-BL00780___spoVAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03486___spoVAB
# 2: BL00780___spoVAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity: 304/441 (68.9%)
# Similarity: 304/441 (68.9%)
# Gaps: 30/441 ( 6.8%)
# Score: 972.5
#
#
#=======================================
BSNT_03486___ 1 ATGATCGTTAGTGTATTGTTCATTATTTTTGTCGGGCTCGGCGGAGGCAT 50
||||||.||||.||..|.||.||.||.|||.||||.||||..|||||..|
BL00780___spo 1 ATGATCATTAGCGTGATATTTATCATCTTTCTCGGACTCGCAGGAGGGGT 50
BSNT_03486___ 51 AACGGTGGGGGCGGGTTTCGTTGCTTTTTTAACCGTAATGGGAATCATTC 100
..|.||.||..|.||.||.||.||||||.|.|||||..|.||.||.||.|
BL00780___spo 51 TGCTGTTGGATCCGGCTTTGTCGCTTTTCTTACCGTGCTTGGCATTATCC 100
BSNT_03486___ 101 CGCGGCTGATGCAGCTCACCAAAACAATGAGATTTGTTCAGGCTTATGAA 150
||.||||||..|||||.||.|||||||...|||||.|.|||||.||||||
BL00780___spo 101 CGAGGCTGACTCAGCTGACGAAAACAAAAGGATTTATCCAGGCGTATGAA 150
BSNT_03486___ 151 GCGGCTGTCATTCTTGGCGCGGTTTGCGGGGGATGGGAGACGCTTCATAT 200
..||||||||||.|.||||||||||.|||.||||||||..||||..|.||
BL00780___spo 151 TGGGCTGTCATTTTAGGCGCGGTTTTCGGAGGATGGGAATCGCTGAACAT 200
BSNT_03486___ 201 GAATCATC-----TTTATCTAACAAAATGGATAGC-TGTGCCGGTCGGGC 244
| || |||.|.||.|.||||||.| || |||.|||.||||.|
BL00780___spo 201 G-----TCCCGCTTTTTTTTATCCAAATGGCT-GCTTGTTCCGATCGGCC 244
BSNT_03486___ 245 TTCTGGCAGGTTTGTTCGTCGGGATGCTAGCGGCTGCTCTTACAGAAGTT 294
||.|.||.||..|.|||.|.||.|||||.||.||.||.||.||||||||.
BL00780___spo 245 TTTTTGCGGGCGTTTTCATTGGAATGCTTGCAGCGGCGCTAACAGAAGTC 294
BSNT_03486___ 295 TTAAATGTCCTGCCGATTTTGGCGAAACGAATCGGGCTCAGAAGTAAAAT 344
||.||.||.||||||||..||||||||||.||||| ||.|..|.|.
BL00780___spo 295 TTGAACGTGCTGCCGATACTGGCGAAACGCATCGG-----GATGGGAGAC 339
BSNT_03486___ 345 C--ATT---ATTTTATTAATGGCCATCGTGATTGGGAA-AATCGCGGGAT 388
| ||| ||..|.|||||||||||.||..|.||.|| |.||.| ||||
BL00780___spo 340 CGGATTTTGATACTTTTAATGGCCATTGTTTTCGGCAAGATTCTC-GGAT 388
BSNT_03486___ 389 CTTTATTTCACTGGCTGTACTTTATTGACCAT---TCATAA 426
|..|.||.||.||||| |.||.|||..||| ||||||
BL00780___spo 389 CGATGTTCCAATGGCT---CATTTTTGTTCATTTGTCATAA 426
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