Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03490 and BL00777

See Amino acid alignment / Visit BSNT_03490 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence dna-align/BSNT_03490___spoIIAB.1.5803.seq
#    -bsequence dna-align/BL00777___spoIIAB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03490___spoIIAB-BL00777___spoIIAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03490___spoIIAB-BL00777___spoIIAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03490___spoIIAB
# 2: BL00777___spoIIAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity:     353/444 (79.5%)
# Similarity:   353/444 (79.5%)
# Gaps:           6/444 ( 1.4%)
# Score: 1403.0
# 
#
#=======================================

BSNT_03490___      1 ATGAAAAATGAAATGCACCTTGAGTTTTCTGCCCTCAGTCAGAATGAATC     50
                     |||||||||||||||.||.||.|||||.|.||.|||||.||.||||||||
BL00777___spo      1 ATGAAAAATGAAATGAACATTCAGTTTACAGCGCTCAGCCAAAATGAATC     50

BSNT_03490___     51 GTTCGCCCGTGTGACAGTTGCATCATTTATAGCTCAGCTGGACCCGACAA    100
                     |||.||.||.||||||||.||..|.|||||.||||||||.||||||||.|
BL00777___spo     51 GTTTGCACGGGTGACAGTCGCTGCTTTTATCGCTCAGCTTGACCCGACGA    100

BSNT_03490___    101 TGGATGAACTGACTGAAATCAAAACAGTCGTGTCAGAGGCTGTCACGAAT    150
                     |||||||||||||.|||||.|||||.|||||.||.||.||.|||||.||.
BL00777___spo    101 TGGATGAACTGACCGAAATTAAAACGGTCGTATCCGAAGCGGTCACAAAC    150

BSNT_03490___    151 GCGATTATCCATGGATATGAAGAGAACT---GTGAAGGAAAAGTTTACAT    197
                     |||||.||.||.||.||||||   ||||   |..|.|||||.||.||.||
BL00777___spo    151 GCGATCATTCACGGTTATGAA---AACTCAGGGCAGGGAAACGTATATAT    197

BSNT_03490___    198 TTCAGTGACGCTGGAAGATCATGTCGTATATATGACCATTCGTGATGAAG    247
                     |||.||.||.||.||.||.|||.|.||.|||.|.||.||.||.||.||||
BL00777___spo    198 TTCCGTCACTCTCGAGGACCATATTGTCTATTTAACGATCCGCGACGAAG    247

BSNT_03490___    248 GCTTAGGCATTACAGATCTTGAAGAAGCCCGTCAGCCTCTATTTACGACT    297
                     |..|.|||||..|..|||||||||||||.||.|||||.||.||.|||||.
BL00777___spo    248 GAGTCGGCATCCCTAATCTTGAAGAAGCGCGCCAGCCCCTGTTCACGACA    297

BSNT_03490___    298 AAGCCTGAGCTTGAGCGCTCTGGAATGGGCTTTACCATTATGGAAAATTT    347
                     ||||||||.||.|||||.||.||||||||||||||.||.|||||||||||
BL00777___spo    298 AAGCCTGAACTCGAGCGGTCGGGAATGGGCTTTACGATCATGGAAAATTT    347

BSNT_03490___    348 CATGGATGATGTCAGTATCGATTCATCGCCTGAAATGGGAACAACGATTC    397
                     ||||||||||.|....|||||.||.||.|||||.||||||||.||.||.|
BL00777___spo    348 CATGGATGATATTTCGATCGACTCCTCACCTGAGATGGGAACCACAATAC    397

BSNT_03490___    398 GCTTAACAAAGCACTTATCAAAAAGCAAAGCGCTTTGTAATTAA    441
                     .||||||||||||||||||||||||||||||||||||.||||||
BL00777___spo    398 ACTTAACAAAGCACTTATCAAAAAGCAAAGCGCTTTGCAATTAA    441


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