Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03494 and BL00774

See Amino acid alignment / Visit BSNT_03494 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence dna-align/BSNT_03494___punA.1.5803.seq
#    -bsequence dna-align/BL00774___punA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03494___punA-BL00774___punA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03494___punA-BL00774___punA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03494___punA
# 2: BL00774___punA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 847
# Identity:     616/847 (72.7%)
# Similarity:   616/847 (72.7%)
# Gaps:          62/847 ( 7.3%)
# Score: 2173.5
# 
#
#=======================================

BSNT_03494___      1 TTGAAGGACAGA--ATTG--AACG-CGCAGCCGCTTTTATTAAA--CAAA     43
                     .||||  |||||  ||||  ||.| |||||.|   |.|||||||  ||||
BL00774___pun      1 GTGAA--ACAGATGATTGCAAATGCCGCAGAC---TATATTAAAAGCAAA     45

BSNT_03494___     44 ACCTGCCGG-AATCTCCGAA------GATCGGCCTTATTTTAGGCTCAGG     86
                     |     ||| ||||    ||      |.|||||||.||.||.||.||.||
BL00774___pun     46 A-----CGGAAATC----AAACCTGCGGTCGGCCTGATATTGGGATCCGG     86

BSNT_03494___     87 TCTTGGCATTTTGGCGGACGAAATCGAAAA-----TCCGGTCAAGCTGAA    131
                     .||||||.|..|.||.||.||.||.|||.|     ||||  ||   |.||
BL00774___pun     87 CCTTGGCGTGCTTGCCGATGAGATAGAAGACGCCGTCCG--CA---TTAA    131

BSNT_03494___    132 ATATGAAGATATACCTGAATTCCCGGTATCTACTGTTGAAGGGCATGCCG    181
                     |||||||||.||.||.||.||.||.||.||.|||||||||||||||||||
BL00774___pun    132 ATATGAAGACATCCCGGACTTTCCTGTTTCCACTGTTGAAGGGCATGCCG    181

BSNT_03494___    182 GACAGCTTGTGCTTGGCACTCTTGAAGGAGTTTCC--GTCATTGCAATGC    229
                     ||||||||||..|.||||..||||||  |.|.|.|  |||.|.||.||||
BL00774___pun    182 GACAGCTTGTCATCGGCAGACTTGAA--AATGTGCAAGTCGTCGCGATGC    229

BSNT_03494___    230 AGGGCCGCTTTCATTTTTATGAAGGCTACTCAATGGAGAAAGTCACATTC    279
                     |.||.||.|||||||||||.|||||.||.||.|||||.||.||.||.|||
BL00774___pun    230 AAGGGCGTTTTCATTTTTACGAAGGGTATTCCATGGACAAGGTAACCTTC    279

BSNT_03494___    280 CCTGTACGCGTGATGAAAGCGCTCGGTGTGGAAGCGTTGATCGTGACAAA    329
                     |||||.||.||.|||||||.|||.||..|.||..|.||.||||||||.||
BL00774___pun    280 CCTGTCCGTGTCATGAAAGAGCTGGGGATCGAGACTTTAATCGTGACCAA    329

BSNT_03494___    330 TGCCGCAGGCGGTGTCAACACTGAA---TTCCGTGCGGGAGACTTAATGA    376
                     ||||||||||||.|||||   ||||   ||||||.|.||.||.||.||||
BL00774___pun    330 TGCCGCAGGCGGCGTCAA---TGAATCGTTCCGTCCCGGCGATTTGATGA    376

BSNT_03494___    377 TTATTACCGATCATATCAACTTTATGGGAACAAACCCGTTAATCGGGCCA    426
                     |.||..|||||||||||||.|.|||||||||.||||||.|.|||||.|||
BL00774___pun    377 TCATATCCGATCATATCAATTATATGGGAACGAACCCGCTGATCGGTCCA    426

BSNT_03494___    427 AACGAAGCAGATT------TCGGCGCCAGATTTCCAGATATGTCTTCAGC    470
                     |||      ||||      ||||||.||||||.||.||||||||.||.||
BL00774___pun    427 AAC------GATTCCTCGCTCGGCGTCAGATTCCCGGATATGTCGTCCGC    470

BSNT_03494___    471 CTATGACAAAGATCTGTCCAGCCTGGCTGAAAAGATTGCGAAAGACCTTA    520
                     .|||||.||.||.|||..|..|.||||..||||.|..||..||||..|.|
BL00774___pun    471 ATATGATAAGGAACTGCGCCTCTTGGCGAAAAAAACAGCCGAAGAATTGA    520

BSNT_03494___    521 ATATCCCAATTCAAAAAGGCGTGTACACTGCTGTGACAGGACCTTCTTAC    570
                     |.|||....|.|||.||||.||.|||||.||.||.|||||||||.|.|||
BL00774___pun    521 ACATCAGCGTACAAGAAGGGGTTTACACAGCCGTTACAGGACCTACATAC    570

BSNT_03494___    571 GAAACACCGGCAGAAGTCCGTTTCTTAAGAACGATGGGCTCTGATGCAGT    620
                     |||||.||.||.|||||.||.|||.|.||||||||.||.||.|||||.||
BL00774___pun    571 GAAACGCCTGCCGAAGTGCGGTTCCTCAGAACGATCGGATCGGATGCCGT    620

BSNT_03494___    621 CGGCATGTCTACTGTTCCGGAAGTCATTGTAGCGAATCATGCGGGAATGC    670
                     |||||||||.||.||||||||||||||.||.||.||.||||||||..|.|
BL00774___pun    621 CGGCATGTCGACGGTTCCGGAAGTCATCGTGGCAAAACATGCGGGCCTTC    670

BSNT_03494___    671 GGGTTCTTGGCATTTCCTGCATCTCTAACGCGGCAGCCGGAATTCTGGAT    720
                     |.||.||.||||||||.||.||.||.|||||||||||||||||.||.|||
BL00774___pun    671 GCGTGCTCGGCATTTCGTGTATATCAAACGCGGCAGCCGGAATCCTCGAT    720

BSNT_03494___    721 CAGCCTTTAAGTCACGATGAAGTGATGGAAGTGACCGAAAAAGTAAAAGC    770
                     |||||..|....||.|||||||||||.|||||.|||||||||||||||||
BL00774___pun    721 CAGCCGCTCTCCCATGATGAAGTGATCGAAGTCACCGAAAAAGTAAAAGC    770

BSNT_03494___    771 TGGATTCTTAAAGCTTGTTAAAGCGATCGTCGCTCAGTA-CGAATAA    816
                     .|..|||||...|.|||||||||||...||||| ||..| ||..|||
BL00774___pun    771 CGACTTCTTGCGGTTTGTTAAAGCGGCAGTCGC-CAAAATCGGCTAA    816


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03494 and BL00774

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
