Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03497 and BL00771
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:29
# Commandline: needle
# -asequence dna-align/BSNT_03497___xerD.1.5803.seq
# -bsequence dna-align/BL00771___xerD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03497___xerD-BL00771___xerD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03497___xerD-BL00771___xerD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03497___xerD
# 2: BL00771___xerD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity: 674/912 (73.9%)
# Similarity: 674/912 (73.9%)
# Gaps: 42/912 ( 4.6%)
# Score: 2441.5
#
#
#=======================================
BSNT_03497___ 1 GTGAAAGATCAAATAAAGGATTTCATCCACTACGTCATGGTAGAGAGAGG 50
|||||||.|||.||.||.||.||.||||||||||.|.|.||.||..|.||
BL00771___xer 1 GTGAAAGTTCATATTAAAGACTTTATCCACTACGCCGTTGTTGAACGGGG 50
BSNT_03497___ 51 GCTCTCTCAAAATACGATCGTATCCTATGAACGTGACTTGAAAAGCTATT 100
|||.||.||.||.|||.|.||...|||||||||.||.|||||.|||||..
BL00771___xer 51 GCTTTCCCACAACACGGTTGTGAGCTATGAACGGGATTTGAACAGCTACG 100
BSNT_03497___ 101 CTCTCTACTTAACAGA-------------AACCCTTCATGTTACAGATTG 137
|...|||.|||...|| |.|.||| |||
BL00771___xer 101 CCGCCTATTTAGAGGAGCAGGAGCAGCTGAGCTCTT-----------TTG 139
BSNT_03497___ 138 GAATCACGTTACCCGCATACATATTATCCAATACTTAAAGCATTTGAAGG 187
|.||.||.||..|..|.||.||.|||||.|..||.||||||||.||.|
BL00771___xer 140 --ACCAGGTGACAAGGCTGCACATCATCCAGTTTTTGAAGCATTTAAAAG 187
BSNT_03497___ 188 ACTCGGGGAAATCCGGCAAGAC-ATCGGCGCGGCATTTGGCATCCATTCG 236
||.|.||.||||||||.||||| .|| |||.|||||.|.||.|||||.||
BL00771___xer 188 ACGCCGGAAAATCCGGAAAGACGGTC-GCGAGGCATCTCGCTTCCATCCG 236
BSNT_03497___ 237 CTCTTTTCATCAATTTCTGCTCAGGGAAAAAGTAACGGATAAGGACCCTT 286
|...|||||.||.||||||||.|||||||||||.||||...|||||||.|
BL00771___xer 237 CAGCTTTCACCAGTTTCTGCTGAGGGAAAAAGTGACGGCCCAGGACCCGT 286
BSNT_03497___ 287 CCGTTCATATCGAAACACAAAAGACGGAACGGGCGCTTCCGAAGGTGCTC 336
||||.|||||.|||.|.|||||.|||||||||.|.||||||||||||||.
BL00771___xer 287 CCGTCCATATTGAATCGCAAAAAACGGAACGGACCCTTCCGAAGGTGCTG 336
BSNT_03497___ 337 GCACTCAATGAAGTCG-AGCGATTATTGGACACGCCTAAGCTGACGAGCC 385
.||.|..|.||||||| |.||.|| |||||.|||||.|||||||||.|.|
BL00771___xer 337 TCATTACAGGAAGTCGAAACGCTT-TTGGATACGCCGAAGCTGACGGGGC 385
BSNT_03497___ 386 CTTTCGGATATCGGGATAAAGCAATGCTGGAGCTGCTTTATGCGACAGGC 435
|.|||||.||.||.||||||||||||||||||.|..|.|||||||||||.
BL00771___xer 386 CGTTCGGCTACCGCGATAAAGCAATGCTGGAGTTATTGTATGCGACAGGA 435
BSNT_03497___ 436 ATACGAGTCAGTGAAATGATTGAGTTGAAAAC-GACAGATGTTCATTTAT 484
||.||.|||||.||.|||||.|..|| |||.| |.|.|||||.|||||||
BL00771___xer 436 ATCCGCGTCAGCGAGATGATCGCATT-AAAGCTGTCCGATGTCCATTTAT 484
BSNT_03497___ 485 CTATGGGGTTTGTCCGATGCTTCGGCAAAGGAAGAAAAGAACGGATTGTG 534
|.|||||.|||.||||.||||||||.|||||||||||.||.|||||.||.
BL00771___xer 485 CGATGGGCTTTATCCGCTGCTTCGGGAAAGGAAGAAAGGAGCGGATCGTT 534
BSNT_03497___ 535 CCAATTGGTGAAGC--CGCCGCTTCCGCCATTGAGGAATATATGACAAAA 582
||..|.||.||||| ||.|.|.| ||..|.|..||||||.||.|||||
BL00771___xer 535 CCGCTCGGCGAAGCGGCGTCACAT--GCGGTCGGCGAATATCTGTCAAAA 582
BSNT_03497___ 583 GCCAGGGGAAAACTGTT---AAAAAATAATGTATCTGACGCCCTCTTTTT 629
||.|||||.||.||.|| ||||||||..|.| ||||||||.|||.|
BL00771___xer 583 GCGAGGGGCAAGCTTTTGAAAAAAAATACCGAA---GACGCCCTGTTTCT 629
BSNT_03497___ 630 AAATCATCACGGCAAACAGATCAGCCGCCAGGGATTTTGGAAGAACCTGA 679
.|||||.|||||||.|||.||.|||||||||||.||||||||.||..|.|
BL00771___xer 630 GAATCACCACGGCAGACAAATGAGCCGCCAGGGGTTTTGGAAAAATTTAA 679
BSNT_03497___ 680 AAAAAATCGCGTTGGAAGCCGGCATTAAGAAAGAGCTGACTCCGCATACA 729
|.||||||||.||||||||.||.|||||.|||||||||||.|||||.||.
BL00771___xer 680 AGAAAATCGCTTTGGAAGCGGGAATTAATAAAGAGCTGACGCCGCACACG 729
BSNT_03497___ 730 CTCAGGCATTCCTTTGCGACGCATCTGCTTGAGAACGGGGCAGATTTAAG 779
||.|||||.||.||.||.||.||..||||.||.|||||.||.|||.|..|
BL00771___xer 730 CTGAGGCACTCATTCGCCACACACTTGCTCGAAAACGGAGCCGATCTCCG 779
BSNT_03497___ 780 AGCGGTGCAGGAAATGCTCGGTCATGCGGATATATCCACAACGCAAATTT 829
.||.||.||||||||||||||.||.||.||.||.||.||.||||||||||
BL00771___xer 780 GGCCGTTCAGGAAATGCTCGGACACGCCGACATTTCGACGACGCAAATTT 829
BSNT_03497___ 830 ATACGCATGTGACGAAAACAAGGCTGAAGGATGTGTACAAGCAGTTTCAT 879
|||||||.||||||||||||||||||||.||||||||.|.|||.|..|||
BL00771___xer 830 ATACGCACGTGACGAAAACAAGGCTGAAAGATGTGTATAGGCAATACCAT 879
BSNT_03497___ 880 CCGCGAGCATAG 891
||.||.||||||
BL00771___xer 880 CCCCGTGCATAG 891
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