Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04715 and BL00770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:57
# Commandline: needle
# -asequence dna-align/BSNT_04715___yuiF.1.5803.seq
# -bsequence dna-align/BL00770___yuiF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04715___yuiF-BL00770___yuiF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04715___yuiF-BL00770___yuiF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04715___yuiF
# 2: BL00770___yuiF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1355
# Identity: 996/1355 (73.5%)
# Similarity: 996/1355 (73.5%)
# Gaps: 52/1355 ( 3.8%)
# Score: 3545.5
#
#
#=======================================
BSNT_04715___ 1 ATGAATGCAGTCGTCATCGCAGTCCTGCTTATGCTTGTATTAAGCCTGCT 50
|||||||||||.||.||.||.||..|..|.||||||.|||||||||||||
BL00770___yui 1 ATGAATGCAGTTGTGATTGCTGTTATTGTGATGCTTATATTAAGCCTGCT 50
BSNT_04715___ 51 GCGTGTCAATATTGTTATCGCATTAATTATAGGCGC-CTTGGCCGGCGGG 99
|||.||||||.|.|||.|.||..|.|||.|.||||| ||| ||||||||.
BL00770___yui 51 GCGGGTCAATGTCGTTCTAGCCCTGATTGTGGGCGCTCTT-GCCGGCGGT 99
BSNT_04715___ 100 TTAACAGGCGGGCTCGGTCTTGGCGAAACGGTTAAAGCTTTCACAGACGG 149
.|.||.|||||.||||||||.|||.|.|||||.|..|..||.||.||.||
BL00770___yui 100 CTGACGGGCGGTCTCGGTCTCGGCCAGACGGTCAGCGTATTTACGGAAGG 149
BSNT_04715___ 150 TCTCGGCGGAAATGCCACCGTTGCAGTTAGCTATGCCATGCTTGGCGCGT 199
.|||||.||.||.||.|||||.|||||.|||||.||..|.||||||||.|
BL00770___yui 150 ACTCGGAGGCAACGCAACCGTCGCAGTCAGCTACGCGCTCCTTGGCGCTT 199
BSNT_04715___ 200 TTGCCGCCGCTTTGACGAAAACGGGTCTTCCGGACGCAATGGTGGAAGCC 249
||||.|.|||||||||||||||||||||||||||.||.|||||.|||||.
BL00770___yui 200 TTGCAGTCGCTTTGACGAAAACGGGTCTTCCGGATGCCATGGTTGAAGCT 249
BSNT_04715___ 250 TCCGTTAAATTAATCGGAAATAAAGAAGATTC---TCGAAAAAAAGCACT 296
.|.||.||..|.|||||.||..|||..|||.| .||.|||| |.||
BL00770___yui 250 GCTGTCAAGCTGATCGGCAAAGAAGGCGATACAAGGCGCAAAA---CCCT 296
BSNT_04715___ 297 GTCTAAGGTGCTGATTGTGCTGATTATTTTAATTGTATCTTGTTTTTCGC 346
.||.||.|.||||||.||..|..|.|||||||||.|.||||||.|.||.|
BL00770___yui 297 TTCAAAAGCGCTGATCGTCTTCGTGATTTTAATTATTTCTTGTATGTCTC 346
BSNT_04715___ 347 AAAACGTCGTTCCGGTTCACATCGCGTTTATCCCGGTGCTGATTCCGCCG 396
||||.||||||||||||||.|||||.|||||.||.||..|.|||||||||
BL00770___yui 347 AAAATGTCGTTCCGGTTCATATCGCATTTATTCCTGTTTTAATTCCGCCG 396
BSNT_04715___ 397 CTTTTGAAAATCTTTAATGAACTTGAAATGGACCGCCGTCTGATCGCGTG 446
.|.||||||||.||.|||||.||..||.||||||||||.|||||.|||||
BL00770___yui 397 TTATTGAAAATTTTGAATGAGCTGCAAGTGGACCGCCGCCTGATTGCGTG 446
BSNT_04715___ 447 TGTAATTACATTTGGCTTAACGGCTCCTTATATTTTGCTTCCGGTCGGTT 496
||..||.|||||.||.||.||.|||||.||||||||||||||.|||||.|
BL00770___yui 447 TGCGATGACATTCGGATTGACAGCTCCGTATATTTTGCTTCCCGTCGGCT 496
BSNT_04715___ 497 TCGGCCAAATCTTCCAAGGCATGCTGAAGGACAATATGGCGGATGCCGGG 546
|||||||.||.|||||.||.||..||||.|||||||||...|||||.||
BL00770___yui 497 TCGGCCAGATTTTCCAGGGGATTTTGAAAGACAATATGAAAGATGCAGG- 545
BSNT_04715___ 547 TTAAACGTTC-----CGCTTGCTGATATTCCGTACGCACTGATTATTCCA 591
.|.||| |..|.|||||||||||...|||..||||.|||||.
BL00770___yui 546 ----CCTTTCTGTCACATTGGCTGATATTCCAATCGCCATGATCATTCCG 591
BSNT_04715___ 592 GTTGCAGGTATGGTTGTCGG----------CCTTATTTTATCAGTGATCG 631
.|||..||.|||.|||.||| .||..|||| |
BL00770___yui 592 ATTGTCGGGATGATTGCCGGTTTGGCCGTTGCTGCTTTT----------G 631
BSNT_04715___ 632 TATACCGTAAA--CCGAAACA-ATATGAAACAAAAGACATTTCAGGTGCA 678
|.|||||.||| ||| || ||||||||..||.||.||..|.||| ||
BL00770___yui 632 TGTACCGCAAACCCCG---CACATATGAAATGAAGGAAATCGCCGGT-CA 677
BSNT_04715___ 679 GAAG-CATCGCCATATACGAGAAAAAGTATTGGTATCGCGGTTCTAGCCA 727
.||| |..||.|.|||||||..|||||..||...||.||.|||.|.||||
BL00770___yui 678 AAAGTCGGCGTCCTATACGAAGAAAAGCCTTTCGATTGCCGTTTTGGCCA 727
BSNT_04715___ 728 TTGTTGTGTCACTCGGCGTCCAGCTTTACTTATCTCAGACTTTGGGAGTA 777
|.|.|||.|||.|..||||.|||||.||.||.|||||||..||.|..||.
BL00770___yui 728 TCGCTGTATCATTAAGCGTACAGCTCTATTTGTCTCAGAGCTTAGACGTC 777
BSNT_04715___ 778 GAAGGAATGATTATGGGGGCGCTC-GCTGGTCTGATTGTTCTGTTTGTCA 826
||.||||||||..|.||.|||||| || |||.||...||..|||||.|.|
BL00770___yui 778 GACGGAATGATCTTCGGCGCGCTCAGC-GGTTTGGCGGTCTTGTTTTTAA 826
BSNT_04715___ 827 GCGGTGTGATGAAGCGTGATGAAGCGGACTCACTGATTACTGATGGAATG 876
||||.|.|||||||||.|..|||||||||..|.||||.|||.|.||.|||
BL00770___yui 827 GCGGAGCGATGAAGCGCGGCGAAGCGGACGAATTGATCACTAACGGCATG 876
BSNT_04715___ 877 GTTTTAATGGCCTTTATCGGCTTTGTCATGCTTGTTGCAGCCGGGTTTTC 926
....|.|||||.||||||||.|||||.|||||.|..||.|||||.|||.|
BL00770___yui 877 AACATGATGGCGTTTATCGGATTTGTGATGCTGGCCGCGGCCGGTTTTGC 926
BSNT_04715___ 927 AAACGT-ATTGACGAAAACCGGAGATGTCGAGTCACTGGTCAAAACGTCA 975
.||.|| .|||| .|||||.||.||||||.|..|.||.||..||.|||||
BL00770___yui 927 CAATGTGCTTGA-AAAAACGGGCGATGTCAAAGCGCTTGTTGAAGCGTCA 975
BSNT_04715___ 976 GCTGGTTTTATCGGACACAGTCA-GTCCTTGGGCGCATTGCTGATGCTCA 1024
.|.|||||.|||.|..|.|.||| ||.| |.|||||||||||||||||..
BL00770___yui 976 ACAGGTTTCATCAGCAATAATCAGGTGC-TCGGCGCATTGCTGATGCTGG 1024
BSNT_04715___ 1025 TTGTCGGCTTATTAATTACAATGGGGATCGGATCTTCTTTTGCGACCATT 1074
|||||||||||||.||.||||||||||||||.||.||.||||||||.|||
BL00770___yui 1025 TTGTCGGCTTATTGATCACAATGGGGATCGGTTCCTCATTTGCGACGATT 1074
BSNT_04715___ 1075 CCTGTTATCACAACCATTTTCGTGCCTCTATGCATGCAGCTTGGATTCAG 1124
||..|||||.||||.||.||.||.||.||.||||||||||||||.|||||
BL00770___yui 1075 CCGATTATCGCAACGATATTTGTTCCGCTTTGCATGCAGCTTGGCTTCAG 1124
BSNT_04715___ 1125 CCCGATGGCAACGATTGCGATTATCGGGGCTGCTGCTGCGCTTGGCGATG 1174
|||||||||.||.||.||.|||||||||.|.||.||.||.||.||.||.|
BL00770___yui 1125 CCCGATGGCGACAATCGCCATTATCGGGACGGCCGCAGCTCTCGGAGACG 1174
BSNT_04715___ 1175 CCGGTTCACCTGCCAGTGACAGTACGCTTGGGCCGACTTCAGGTTTGAGT 1224
|||||||||||||.||.|||||.||||||||.|||||.||.||.||.|.|
BL00770___yui 1175 CCGGTTCACCTGCGAGCGACAGCACGCTTGGACCGACATCCGGCTTAAAT 1224
BSNT_04715___ 1225 GCGGACGGCCAGCATCACCACATTTGGGATACTTGTGTGCCGACATTTAT 1274
||||||||.|||||.||||||||||||||.||.|||||.||||||||.||
BL00770___yui 1225 GCGGACGGACAGCACCACCACATTTGGGACACCTGTGTTCCGACATTCAT 1274
BSNT_04715___ 1275 ATTTTATAATATTCCGCTTGTCATCTTTGGCTGGATTGCAGCGCTTGTTT 1324
.||.||||||||||||||..|..|.||.||||||||.||.|||.|||||.
BL00770___yui 1275 CTTCTATAATATTCCGCTGATTTTGTTCGGCTGGATCGCGGCGATTGTTC 1324
BSNT_04715___ 1325 TATAG 1329
|.||.
BL00770___yui 1325 TTTAA 1329
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