Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04715 and BL00770

See Amino acid alignment / Visit BSNT_04715 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:57
# Commandline: needle
#    -asequence dna-align/BSNT_04715___yuiF.1.5803.seq
#    -bsequence dna-align/BL00770___yuiF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04715___yuiF-BL00770___yuiF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04715___yuiF-BL00770___yuiF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04715___yuiF
# 2: BL00770___yuiF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1355
# Identity:     996/1355 (73.5%)
# Similarity:   996/1355 (73.5%)
# Gaps:          52/1355 ( 3.8%)
# Score: 3545.5
# 
#
#=======================================

BSNT_04715___      1 ATGAATGCAGTCGTCATCGCAGTCCTGCTTATGCTTGTATTAAGCCTGCT     50
                     |||||||||||.||.||.||.||..|..|.||||||.|||||||||||||
BL00770___yui      1 ATGAATGCAGTTGTGATTGCTGTTATTGTGATGCTTATATTAAGCCTGCT     50

BSNT_04715___     51 GCGTGTCAATATTGTTATCGCATTAATTATAGGCGC-CTTGGCCGGCGGG     99
                     |||.||||||.|.|||.|.||..|.|||.|.||||| ||| ||||||||.
BL00770___yui     51 GCGGGTCAATGTCGTTCTAGCCCTGATTGTGGGCGCTCTT-GCCGGCGGT     99

BSNT_04715___    100 TTAACAGGCGGGCTCGGTCTTGGCGAAACGGTTAAAGCTTTCACAGACGG    149
                     .|.||.|||||.||||||||.|||.|.|||||.|..|..||.||.||.||
BL00770___yui    100 CTGACGGGCGGTCTCGGTCTCGGCCAGACGGTCAGCGTATTTACGGAAGG    149

BSNT_04715___    150 TCTCGGCGGAAATGCCACCGTTGCAGTTAGCTATGCCATGCTTGGCGCGT    199
                     .|||||.||.||.||.|||||.|||||.|||||.||..|.||||||||.|
BL00770___yui    150 ACTCGGAGGCAACGCAACCGTCGCAGTCAGCTACGCGCTCCTTGGCGCTT    199

BSNT_04715___    200 TTGCCGCCGCTTTGACGAAAACGGGTCTTCCGGACGCAATGGTGGAAGCC    249
                     ||||.|.|||||||||||||||||||||||||||.||.|||||.|||||.
BL00770___yui    200 TTGCAGTCGCTTTGACGAAAACGGGTCTTCCGGATGCCATGGTTGAAGCT    249

BSNT_04715___    250 TCCGTTAAATTAATCGGAAATAAAGAAGATTC---TCGAAAAAAAGCACT    296
                     .|.||.||..|.|||||.||..|||..|||.|   .||.||||   |.||
BL00770___yui    250 GCTGTCAAGCTGATCGGCAAAGAAGGCGATACAAGGCGCAAAA---CCCT    296

BSNT_04715___    297 GTCTAAGGTGCTGATTGTGCTGATTATTTTAATTGTATCTTGTTTTTCGC    346
                     .||.||.|.||||||.||..|..|.|||||||||.|.||||||.|.||.|
BL00770___yui    297 TTCAAAAGCGCTGATCGTCTTCGTGATTTTAATTATTTCTTGTATGTCTC    346

BSNT_04715___    347 AAAACGTCGTTCCGGTTCACATCGCGTTTATCCCGGTGCTGATTCCGCCG    396
                     ||||.||||||||||||||.|||||.|||||.||.||..|.|||||||||
BL00770___yui    347 AAAATGTCGTTCCGGTTCATATCGCATTTATTCCTGTTTTAATTCCGCCG    396

BSNT_04715___    397 CTTTTGAAAATCTTTAATGAACTTGAAATGGACCGCCGTCTGATCGCGTG    446
                     .|.||||||||.||.|||||.||..||.||||||||||.|||||.|||||
BL00770___yui    397 TTATTGAAAATTTTGAATGAGCTGCAAGTGGACCGCCGCCTGATTGCGTG    446

BSNT_04715___    447 TGTAATTACATTTGGCTTAACGGCTCCTTATATTTTGCTTCCGGTCGGTT    496
                     ||..||.|||||.||.||.||.|||||.||||||||||||||.|||||.|
BL00770___yui    447 TGCGATGACATTCGGATTGACAGCTCCGTATATTTTGCTTCCCGTCGGCT    496

BSNT_04715___    497 TCGGCCAAATCTTCCAAGGCATGCTGAAGGACAATATGGCGGATGCCGGG    546
                     |||||||.||.|||||.||.||..||||.|||||||||...|||||.|| 
BL00770___yui    497 TCGGCCAGATTTTCCAGGGGATTTTGAAAGACAATATGAAAGATGCAGG-    545

BSNT_04715___    547 TTAAACGTTC-----CGCTTGCTGATATTCCGTACGCACTGATTATTCCA    591
                         .|.|||     |..|.|||||||||||...|||..||||.|||||.
BL00770___yui    546 ----CCTTTCTGTCACATTGGCTGATATTCCAATCGCCATGATCATTCCG    591

BSNT_04715___    592 GTTGCAGGTATGGTTGTCGG----------CCTTATTTTATCAGTGATCG    631
                     .|||..||.|||.|||.|||          .||..||||          |
BL00770___yui    592 ATTGTCGGGATGATTGCCGGTTTGGCCGTTGCTGCTTTT----------G    631

BSNT_04715___    632 TATACCGTAAA--CCGAAACA-ATATGAAACAAAAGACATTTCAGGTGCA    678
                     |.|||||.|||  |||   || ||||||||..||.||.||..|.||| ||
BL00770___yui    632 TGTACCGCAAACCCCG---CACATATGAAATGAAGGAAATCGCCGGT-CA    677

BSNT_04715___    679 GAAG-CATCGCCATATACGAGAAAAAGTATTGGTATCGCGGTTCTAGCCA    727
                     .||| |..||.|.|||||||..|||||..||...||.||.|||.|.||||
BL00770___yui    678 AAAGTCGGCGTCCTATACGAAGAAAAGCCTTTCGATTGCCGTTTTGGCCA    727

BSNT_04715___    728 TTGTTGTGTCACTCGGCGTCCAGCTTTACTTATCTCAGACTTTGGGAGTA    777
                     |.|.|||.|||.|..||||.|||||.||.||.|||||||..||.|..||.
BL00770___yui    728 TCGCTGTATCATTAAGCGTACAGCTCTATTTGTCTCAGAGCTTAGACGTC    777

BSNT_04715___    778 GAAGGAATGATTATGGGGGCGCTC-GCTGGTCTGATTGTTCTGTTTGTCA    826
                     ||.||||||||..|.||.|||||| || |||.||...||..|||||.|.|
BL00770___yui    778 GACGGAATGATCTTCGGCGCGCTCAGC-GGTTTGGCGGTCTTGTTTTTAA    826

BSNT_04715___    827 GCGGTGTGATGAAGCGTGATGAAGCGGACTCACTGATTACTGATGGAATG    876
                     ||||.|.|||||||||.|..|||||||||..|.||||.|||.|.||.|||
BL00770___yui    827 GCGGAGCGATGAAGCGCGGCGAAGCGGACGAATTGATCACTAACGGCATG    876

BSNT_04715___    877 GTTTTAATGGCCTTTATCGGCTTTGTCATGCTTGTTGCAGCCGGGTTTTC    926
                     ....|.|||||.||||||||.|||||.|||||.|..||.|||||.|||.|
BL00770___yui    877 AACATGATGGCGTTTATCGGATTTGTGATGCTGGCCGCGGCCGGTTTTGC    926

BSNT_04715___    927 AAACGT-ATTGACGAAAACCGGAGATGTCGAGTCACTGGTCAAAACGTCA    975
                     .||.|| .|||| .|||||.||.||||||.|..|.||.||..||.|||||
BL00770___yui    927 CAATGTGCTTGA-AAAAACGGGCGATGTCAAAGCGCTTGTTGAAGCGTCA    975

BSNT_04715___    976 GCTGGTTTTATCGGACACAGTCA-GTCCTTGGGCGCATTGCTGATGCTCA   1024
                     .|.|||||.|||.|..|.|.||| ||.| |.|||||||||||||||||..
BL00770___yui    976 ACAGGTTTCATCAGCAATAATCAGGTGC-TCGGCGCATTGCTGATGCTGG   1024

BSNT_04715___   1025 TTGTCGGCTTATTAATTACAATGGGGATCGGATCTTCTTTTGCGACCATT   1074
                     |||||||||||||.||.||||||||||||||.||.||.||||||||.|||
BL00770___yui   1025 TTGTCGGCTTATTGATCACAATGGGGATCGGTTCCTCATTTGCGACGATT   1074

BSNT_04715___   1075 CCTGTTATCACAACCATTTTCGTGCCTCTATGCATGCAGCTTGGATTCAG   1124
                     ||..|||||.||||.||.||.||.||.||.||||||||||||||.|||||
BL00770___yui   1075 CCGATTATCGCAACGATATTTGTTCCGCTTTGCATGCAGCTTGGCTTCAG   1124

BSNT_04715___   1125 CCCGATGGCAACGATTGCGATTATCGGGGCTGCTGCTGCGCTTGGCGATG   1174
                     |||||||||.||.||.||.|||||||||.|.||.||.||.||.||.||.|
BL00770___yui   1125 CCCGATGGCGACAATCGCCATTATCGGGACGGCCGCAGCTCTCGGAGACG   1174

BSNT_04715___   1175 CCGGTTCACCTGCCAGTGACAGTACGCTTGGGCCGACTTCAGGTTTGAGT   1224
                     |||||||||||||.||.|||||.||||||||.|||||.||.||.||.|.|
BL00770___yui   1175 CCGGTTCACCTGCGAGCGACAGCACGCTTGGACCGACATCCGGCTTAAAT   1224

BSNT_04715___   1225 GCGGACGGCCAGCATCACCACATTTGGGATACTTGTGTGCCGACATTTAT   1274
                     ||||||||.|||||.||||||||||||||.||.|||||.||||||||.||
BL00770___yui   1225 GCGGACGGACAGCACCACCACATTTGGGACACCTGTGTTCCGACATTCAT   1274

BSNT_04715___   1275 ATTTTATAATATTCCGCTTGTCATCTTTGGCTGGATTGCAGCGCTTGTTT   1324
                     .||.||||||||||||||..|..|.||.||||||||.||.|||.|||||.
BL00770___yui   1275 CTTCTATAATATTCCGCTGATTTTGTTCGGCTGGATCGCGGCGATTGTTC   1324

BSNT_04715___   1325 TATAG   1329
                     |.||.
BL00770___yui   1325 TTTAA   1329


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