Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04714 and BL00769
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:57
# Commandline: needle
# -asequence dna-align/BSNT_04714___yuiG.1.5803.seq
# -bsequence dna-align/BL00769___yuiG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04714___yuiG-BL00769___yuiG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04714___yuiG-BL00769___yuiG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04714___yuiG
# 2: BL00769___yuiG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 667
# Identity: 399/667 (59.8%)
# Similarity: 399/667 (59.8%)
# Gaps: 134/667 (20.1%)
# Score: 1078.5
#
#
#=======================================
BSNT_04714___ 1 ATGA--AACAACGTAAACTTCGTGCGGGAGATATGGCGCTGATTGGCATG 48
|||| ||.|| .||||||||.||.||.|||||||||||..|.||.|||
BL00769___yui 1 ATGAATAATAA--AAAACTTCGCGCCGGCGATATGGCGCTTGTCGGAATG 48
BSNT_04714___ 49 TTCGCCGCACTTATGGCTGTCGGGGCCAACATTACATCAGTAGCACCCTT 98
||.|||||.||.||||...||||.||.||.||.||.||..|.||.||.||
BL00769___yui 49 TTTGCCGCTCTGATGGGGATCGGCGCTAATATCACTTCGTTTGCCCCGTT 98
BSNT_04714___ 99 TTTACAAGTAGCCGGCATTCCGCTTTCGATGCAGCCGTTTTTCTGTCT-C 147
|.|.|||.|.|.|||.|||||||||.||||||||||.||.||||||.| |
BL00769___yui 99 TCTGCAAATCGGCGGTATTCCGCTTACGATGCAGCCTTTCTTCTGTTTGC 148
BSNT_04714___ 148 TTGGCTG-CTTTGCTTCTTGGCAGCAAACGAGCAGCGATTGCCATGATTG 196
|||.|.| |||| |.||.|||.|.|||..||..|||.|..|||||||||
BL00769___yui 149 TTGCCGGACTTT--TGCTCGGCCGTAAATTAGGTGCGCTGTCCATGATTG 196
BSNT_04714___ 197 TATATGCACTTGTGGG----ATTGGCCGGAGCGCCTGTGTTTGCTCAATT 242
|.|||||..|.||.|| |||||| ||.||.||.||.|||...||
BL00769___yui 197 TCTATGCGTTAGTCGGCTTTATTGGC----GCTCCGGTATTCGCTTCTTT 242
BSNT_04714___ 243 TTCAGCAGG----------CTTCGCACCGTTTGCAGGGAAAAGCGGCGGG 282
|||||..|| ||| |||..||| |||||..||.
BL00769___yui 243 TTCAGGCGGTATTTCCGTTCTT-------TTTAAAGG---AAGCGCAGGC 282
BSNT_04714___ 283 TTTATTATCTCATACATTCCGGCAGCATTTGCAGCGGGATGGTTTTTAGA 332
||||||.|.||.||.|||||.||.||||.|||.|||||.||| |..
BL00769___yui 283 TTTATTCTATCCTATATTCCTGCCGCATATGCCGCGGGCTGG-----ATC 327
BSNT_04714___ 333 ACG---AAACATTC--AGCCAAGTAAAA--------TTCGATTTCTCATT 369
||| ||||..|| |.|| .|||| || ||||.||
BL00769___yui 328 ACGGACAAACTATCCGAACC---GAAAACAGGCCACTT---TTTCGCA-- 369
BSNT_04714___ 370 GCTTCACTTATCGGAACGGCGATCATGTATCTCATCGGCACTACCTATAT 419
||.|||.|.|||||.|||..||||||.|||||.||||||...|.|||||.
BL00769___yui 370 GCCTCATTGATCGGTACGCTGATCATTTATCTGATCGGCGTCAACTATAC 419
BSNT_04714___ 420 GTATC-------TTGCACTGAAGCTGTGGATTCATACGCC--AGTGAGCT 460
||||| ||.|||| |||.|..||||.|| .||.|..|
BL00769___yui 420 GTATCTCGCTTTTTCCACT-------TGGCTCAATACACCGATGTCATAT 462
BSNT_04714___ 461 ACGGCACGGCTTGGGGCTTT-----ATGAT---TTGGTTTATGGTAAAAG 502
.|.|| || ||| ||||| .|||||..|.||.||||
BL00769___yui 463 TCAGC-CG---------TTTGGAAAATGATGGCCTGGTTCTTCGTGAAAG 502
BSNT_04714___ 503 ATACAGCGC-TGGCTGTGATACTGTCGTT-----------TATCGCACCA 540
| | |||| ||.|| .|||| ..||||..||
BL00769___yui 503 A-------CTTGGC----ATTCT-CCGTTCTGCTCGCCGCGCTCGCCTCA 540
BSNT_04714___ 541 GCAA--TCTACCGCTCTATTCATAAAGCAACCGGCTTTAACAGAAATC-- 586
|| |.|.|||..|..||||.||||...|.|||||.|..|||||||
BL00769___yui 541 --AAGGTTTTCCGGGCGGTTCAAAAAGGCGCAGGCTTCAGAAGAAATCCG 588
BSNT_04714___ 587 ACATATCATCTACGTAA 603
||.|.| |||
BL00769___yui 589 ACTTTT--------TAA 597
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