Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01575 and BL00762
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:01
# Commandline: needle
# -asequence dna-align/BSNT_01575.1.5803.seq
# -bsequence dna-align/BL00762.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01575-BL00762.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01575-BL00762.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01575
# 2: BL00762
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 974
# Identity: 471/974 (48.4%)
# Similarity: 471/974 (48.4%)
# Gaps: 385/974 (39.5%)
# Score: 902.0
#
#
#=======================================
BSNT_01575 1 ATGAAAAA------------AGAATTT--------GAGC----------- 19
||| | ||||.|| ||||
BL00762 1 ATG----ACCGTTGTGCCGGAGAAATTGTACTGTAGAGCTTGTAAGAGAA 46
BSNT_01575 20 AAACAA--CACTAGAGGAAAATGTTTACTGTTCCAAATG----TAAAAAT 63
|||||| ||..||| || |||..||||| |.|.|||
BL00762 47 AAACAAACCATCAGA----------TA--GTTAAAAATGAGCATGACAAT 84
BSNT_01575 64 AATACTAAA-CATTTAATAA-TAA---AGAGTCATAGAAGAGGTTCATTT 108
.| |||||| .|||.||||| ||| |||.| |.|| |
BL00762 85 GA-ACTAAAGTATTCAATAAGTAATTTAGATT-----ATGA--------T 120
BSNT_01575 109 CAAGAAATTGAACCAGAATTTCAGTGGCAGG-------AATCATTTCATA 151
.||||||||||.....||||| |.|| ||| ||| |.||| |
BL00762 121 GAAGAAATTGATTTTCAATTT-AATG--AGGATTATGCAAT-AGTTC--A 164
BSNT_01575 152 TTGTAGAGTGTGCAGGTTGTCAAAATATTTCTTTTGTTAATCAATAT--G 199
.||||| |||||||.|...||||.|||||.|.|| ||||| |
BL00762 165 ATGTAG-------AGGTTGTGACGCTATTGCTTTTCTAAA--AATATACG 205
BSNT_01575 200 GGGATGAGGATACTTG------------GG-----AATAT----GTGAGA 228
|.|||||.|||| || || |.||| .|||.|
BL00762 206 GCGATGAAGATA--TGTTTCATATAGTCGGTTCAAATTATCATACTGATA 253
BSNT_01575 229 GGAGAA-AGGGAGTGG----CACGATGTCTTTAAAGTTTATCCAG----- 268
||||| |....||.| ||| |||||| |||||
BL00762 254 -GAGAATACTTTGTCGAATACAC--TGTCTT---------TCCAGAAGAG 291
BSNT_01575 269 --AAAAACGATTTGAGGATAC---AGAAGAGTATAGGATAGAACAAGCAT 313
|||||.| ||||||.| ||||.||| ||..||| ||
BL00762 292 CCAAAAAAG----GAGGATCCGGTAGAACAGT------TATTACA---AT 328
BSNT_01575 314 TC-AAGAACCGATATTGGCTAAAAGTAAAAGCGTTTAGTTATGTACCGTC 362
|| ||||| |||..|.||..||.|.|.|||..||
BL00762 329 TCAAAGAA------------AAATATGAATTCGATCACTTACCTA----- 361
BSNT_01575 363 AGCTCTTTATAATTTGTATAAGCAAAT-----TATTCAAGCTTAT----A 403
.|||.||||.|.|.||.|| |||| .|||.|.|||||| |
BL00762 362 ---ACTTAATAAATGGAATTAG-AAATGAAACAATTAATGCTTATCGCCA 407
BSNT_01575 404 ATGAAAATCTTAATATATTGTGTGCTTCAGGTTTAA----GGATTTTATT 449
|.| |.|.|||.||||.|| .|| ||| |||
BL00762 408 ACG----TATGAATTTATTATG-----------CAATACGGGA----ATT 438
BSNT_01575 450 AGAAGGTATATGCAACGATCTAGGTATAAAAAAAGGGTATGTTTATGATA 499
||||.|..||| |.||..|| |||| ||||.||
BL00762 439 AGAATGCTTAT---------------TGAATCAA---TATG--TATGGTA 468
BSNT_01575 500 A--GGATAAACAAATTATTAAAAAAAATGGAGAGACCAATCCCAAAAAAA 547
| ||| |||.|.||| |||||.|
BL00762 469 AATGGA----------ATTGATAAA-------AGACCGA----------- 490
BSNT_01575 548 GAGAGAGTTTAGAGGGGA-----AGTTTT--TTGGTCTTTATGAC----- 585
||| ||.|||.|||| |||.|| .|||||.|.|..||
BL00762 491 ---AGA-TTAAGAAGGGAGAACCAGTGTTAGATGGTCATAAAAACCCGGT 536
BSNT_01575 586 AATGG-----TTATATATTGTTT---------AATCAAGCGCTTATTTTA 621
||||| |||.|| |||.|| |||.|| |||| .|
BL00762 537 AATGGTCAATTTAAAT-TTGGTTCAAAAGATAAATGAA---CTTA---AA 579
BSNT_01575 622 CAAAA-AATA------AGGGGCATCGGAAATGAAGCGAT--TCATG---- 658
.|||| |||| |.|.|.|.| ||.|||| ||| ||.||
BL00762 580 GAAAAGAATATAATTGATGAGGAAC---AACGAAG-GATACTCTTGGAAA 625
BSNT_01575 659 ---AAGTTGTTG--AACCTG-------ATAAATTAGTTTC-----AAA-- 689
|||.|||.| ||.|.| ||.||.|| |||| |||
BL00762 626 TTAAAGATGTAGGAAATCAGACAGTACATGAAATA-TTTCGACCGAAACG 674
BSNT_01575 690 -AAAAATAATCATTATTG-------TAGAGAGCATT----------CTAG 721
|.|.|| |||||| |||| |.|||| |||.
BL00762 675 GAGAGAT-----TTATTGTTATATCTAGA-AACATTAGATTTAATACTAT 718
BSNT_01575 722 AAAACACTTATGAATTAGAGCATCATGAGTTATTGAAGTTGAAAGAAGAT 771
..||.|.|||||||||| |.||| ||||.||.| ||.||
BL00762 719 TTAATATTTATGAATTA---CCTCA-----TATTAAAAT---AACAA--- 754
BSNT_01575 772 GAAGATTTA-AAAG-----GTTAA 789
|||.| .||| ||||.
BL00762 755 ----ATTCACCAAGCCCTAGTTAG 774
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